Basic Information

Insect: Musca domestica
Gene Symbol: -
Assembly: GCA_000371365.1
Location: Scaffold18623:56002-59099[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00068 0.034 14.3 1.0 1 23 331 354 331 354 0.92

2 12 5.9e-05 0.0029 17.6 2.0 2 23 357 378 356 378 0.96

3 12 1.3e-06 6.4e-05 22.9 0.7 1 23 385 407 385 407 0.99

4 12 2.2e-07 1.1e-05 25.3 1.0 1 23 413 435 413 435 0.99

5 12 0.0003 0.015 15.4 4.6 1 23 442 464 442 464 0.98

6 12 1.3e-06 6.5e-05 22.8 1.7 1 23 470 492 470 492 0.97

7 12 1.6e-05 0.00078 19.5 0.3 1 23 498 520 498 520 0.98

8 12 6.1e-06 0.0003 20.7 0.6 1 23 526 549 526 549 0.97

9 12 0.00025 0.012 15.7 2.2 1 23 555 578 555 578 0.95

10 12 0.0015 0.074 13.2 2.9 1 23 584 606 584 606 0.98

11 12 8.5e-05 0.0042 17.1 0.5 1 23 612 634 612 634 0.96

12 12 0.00025 0.012 15.7 0.3 1 22 640 661 640 664 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00068	0.034	14.3	1.0	1	23	331	354	331	354	0.92
2	12	5.9e-05	0.0029	17.6	2.0	2	23	357	378	356	378	0.96
3	12	1.3e-06	6.4e-05	22.9	0.7	1	23	385	407	385	407	0.99
4	12	2.2e-07	1.1e-05	25.3	1.0	1	23	413	435	413	435	0.99
5	12	0.0003	0.015	15.4	4.6	1	23	442	464	442	464	0.98
6	12	1.3e-06	6.5e-05	22.8	1.7	1	23	470	492	470	492	0.97
7	12	1.6e-05	0.00078	19.5	0.3	1	23	498	520	498	520	0.98
8	12	6.1e-06	0.0003	20.7	0.6	1	23	526	549	526	549	0.97
9	12	0.00025	0.012	15.7	2.2	1	23	555	578	555	578	0.95
10	12	0.0015	0.074	13.2	2.9	1	23	584	606	584	606	0.98
11	12	8.5e-05	0.0042	17.1	0.5	1	23	612	634	612	634	0.96
12	12	0.00025	0.012	15.7	0.3	1	22	640	661	640	664	0.92

Sequence Information

Coding Sequence: ATGGAGTCGGTTCGCTGTTATTTATGTGACCATGAATTTGTTGATGGCGAGGAGCCCTGGTTGATGTTTGAGGAAAGGCTACGGGAGGATGGACAAATAGAATGTTCCCTAGCTGCATTACTAGAATCGATATTGCAAACAGAGTTGGATGAAAACTCTGCACATTCCACGTTGCTGTGCGATTCCTGCAATGCCGATGTTTTGGAGTTTGAAAGTTTGGAGAAAAGATATGCACAGTTACGGGAACGCATTCTGACATCGTACAAAGAGAATATGACATTACGCGatataaaatcaatttcaaatattttgaaagacaaTGACAATGTTGAACCTCCAGGTGAAGTTGGGTTTGTTGATCACTTAATAAGCCAGCGAACGACTAACATGATCGGAATTTGTGACGCTGACCTAATAGAAGAAGTCCCAGATGAAGACGAAATTATTGACGGGGAAACAACTGAAAATTTGGGCCAGCAGGATGATCTAAGCAATAAAATAATAAGCGAAAACTTTGATTTTGCTGCATTTAATGAACATGTTGCTCAAAATTCGCTTCCAGGCAATGTATTGAATTTGTCCGATAGCCTTGTTAATATAACTGTCGATCACACTGTGAACGTACAGAATATACCATTGGAAGGAcaagATATAATCATTTACGATGTTGGAACCAAAGGGAATCTGGAAGATCCGCCCAGTAACGCAAACATTCAAAATAGTCCAACCGACTTCAAACACGATGAGgATAATGATCTTGATTTTATAATATCGTCAAATGTTTTCGACAATGATAGTAAAAAAGACGACAACACAAATTTCATGCTGGGAAATTTAGACAAAGTGAAAACTGATTCTGAAGTGATACTTCCAAAACCAATTTGTAAACAAGAAGGAGAAGAATACATTTGCTTGTTGTGTGAAATGTCGCCAAAGTACACAATGGACTCCCTTAAGGAACACGTTCAAACCTTTCACAACTGCAGAATTCATATGTGCGAACAGTGTAACGAAGGGTTTCGTAGGAGGCAGGACCTCAAAATACATTCAGAGTCTGGTCACACTTTAGAATGCGACGTATGTCATCGTATATTCAGCAGCCAACGATTATTAAAACTCCACAGACGGTTACATTTTAGCAACTCCAAGCCATACGAGTGTTCAGTCTGCCAGAAAAAGTATAGTTCGAAGGGAATGCTCGAGGAACACATGAACACACATACCGGCTATCGTCCATACAAATGTCCAGAATGCTCCAAAGATTTCGCCTCAAAATATACTCTTCAATCTCACATGAAAATCCACAGGGAGCGTCCAAGACCATTTCACTGCGACCAGTGCGGTAAACGATTTCTGAATCAACAAAACCTCACACAACACAAAAGGTCGCATGTCGCGGGAAAAGCATTCGAGTGTGAAGTTTGTAATAAGTCCTTCACGACCCAGCATAGTttacaagtacataaaattgtgCACACTGGACAACGACCATTCATTTGCCGTATATGTGGCAAATCTTTTGCGAGACGACCTGAAATTAAGGATCATGAACGTACGCATACCGGAGAAAAGCCATACCAATGTGATCTTTGTCCTCTCGCGTTTGCTCAGCGCTCCAATTTAACCAGTCATAAGAAATCGACGCATTTCAATGAAAAGCTACATAAATGTGATCAGTGTCTTCGCTCATTCAAGCGCAAAAGATTACTGGAATATCATATTCAGGCGGCACATACTGGAGAACGTCCACACAAGTGCGATATTTGTGGAGCAGGTTTCGTTTATCCTGAACACTGTAAAAAACACATGCTTATACATAGTGGTCAGAAACCATATGCTTGTGAAGTGTGTGGCAAACAGTTTAATAGTCGCGACAACCGCAACGCCCACCGTTTTGTCCACAGTGACAAAAAACCTTATGAATGCATGGAATGCGGAGCTGGATTCATGCGAAAACCACATTTACTCGCTCACATGAAACAAGCAAAACATACGAATGATACCATCATTGTTAATCAGCCACAATTTACACAGCATGTTAGCATGGATGACCACAGCGGTACCATAGGCTCTGACTCTTTAGACGAAGAAAATGATTTAGATGATAACCTGCAAACCGAAGAGTCCGACGAGTgtctccaaaaaataatatttaaaccgGATGACCTTTTGACCGAAGATCCATCGGTTTCCAGTATGGAAGAAAATCCCGCTGAGGATGTGATAACTGTCGAAAGTCATCTAATTAAAGATGAATTGGGTGTCgtcaaatatttacaatttgaaGATTTGGAACGTGATGGCAATCAAACTTTGACATGGGTCGACATGGCAAGCGATTAG
Protein Sequence: MESVRCYLCDHEFVDGEEPWLMFEERLREDGQIECSLAALLESILQTELDENSAHSTLLCDSCNADVLEFESLEKRYAQLRERILTSYKENMTLRDIKSISNILKDNDNVEPPGEVGFVDHLISQRTTNMIGICDADLIEEVPDEDEIIDGETTENLGQQDDLSNKIISENFDFAAFNEHVAQNSLPGNVLNLSDSLVNITVDHTVNVQNIPLEGQDIIIYDVGTKGNLEDPPSNANIQNSPTDFKHDEDNDLDFIISSNVFDNDSKKDDNTNFMLGNLDKVKTDSEVILPKPICKQEGEEYICLLCEMSPKYTMDSLKEHVQTFHNCRIHMCEQCNEGFRRRQDLKIHSESGHTLECDVCHRIFSSQRLLKLHRRLHFSNSKPYECSVCQKKYSSKGMLEEHMNTHTGYRPYKCPECSKDFASKYTLQSHMKIHRERPRPFHCDQCGKRFLNQQNLTQHKRSHVAGKAFECEVCNKSFTTQHSLQVHKIVHTGQRPFICRICGKSFARRPEIKDHERTHTGEKPYQCDLCPLAFAQRSNLTSHKKSTHFNEKLHKCDQCLRSFKRKRLLEYHIQAAHTGERPHKCDICGAGFVYPEHCKKHMLIHSGQKPYACEVCGKQFNSRDNRNAHRFVHSDKKPYECMECGAGFMRKPHLLAHMKQAKHTNDTIIVNQPQFTQHVSMDDHSGTIGSDSLDEENDLDDNLQTEESDECLQKIIFKPDDLLTEDPSVSSMEENPAEDVITVESHLIKDELGVVKYLQFEDLERDGNQTLTWVDMASD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -