Mdom004172.1
Basic Information
- Insect
- Musca domestica
- Gene Symbol
- lola
- Assembly
- GCA_000371365.1
- Location
- Scaffold20345:98781-103969[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-11 2.8e-08 33.0 0.0 3 45 421 463 419 463 0.90 2 2 8 1.4e+04 -5.2 1.3 4 15 557 568 557 570 0.72
Sequence Information
- Coding Sequence
- ATGGGTGGTCCACCAGCTACCTCTAATCCCGCCACATCATCATCGGGCCATCCCGAGGGCCAGACATACTGTTTGCGCTGGAATAATcacaaatcaaatttaattgaaattctcGATGCCCTCATCAAGGTGGAGAGCTATGTCGACTGTACCATTGTGGTCGATGATCAGGTACAATTCAAGGCCCATCGTGTGGTCTTGGCTGCCAATTCGCCATATTTCCAATCAATTCTACAGGATATGCCCATGGATCACTGTAGCATAATATTCCCGGGCGTTAAGGCCTTTGAAATGCGTGCCCTCTTGGAGTATATGTATACGGGAGAGGTGAATGTCACCCAAAGTCAAATACCCAAAATTATGCGCATTGCCGAAGAGTTGGAGGTTAAGGGCCTCTTCGATATGGCCGATTTAAAGGAGAAATTCCACAAGCTAAGCGAAGAACATGCCGAACGCACAGCCAATAATCCCTATGCCAATACATCGGCACCTAGTAATCCCTACTCTTCGGTGAGCACATCGTCGGCGGCAACCCCGCAACAAACCACCAAACACAATGATAATGAAAATTATCATCACAATTCCTCCTCCGTGATCTCTACCTCATCGAATATTTCACCCTCGGCTGCGCCATCCTCATCCTCTTCACCGCCCTACAGCAATTACAAATCTCCCTATGCCAGTCTGTACAGCAAATCTCCGGCTGCAAATCAATCGAATAACAACTCACCCGCCCAATCGACCCAACAGACACCcactcacaacaacaacaacaacaatgcctcGGCTTCGGAACGTTCAGGACAATGGGCCATGTCACCATCGGCTGCGGCAGCCGCTGCCATGTTGAGTTCTGTCTATGAATCTGCACCCGACATGAATCCCCTGAAACGCAAGAAACTTTCCTCAATCTCTTCGATGCTCATGAATCGTGATACTCCAATTTTACGCAACGTTTTGGCTCAGGCAAATCCCGCTGACTCCTCGCAGCCAATGCCCCTCATGATGCCCACCTCAGGTGGTAAGGGTGAGAAAATGAGCTCCACACCCAGCAGCATGGAAAAGGGCAATGGCAATCACAGTTTCAATGGTTCCGATTACAGTAATGATAAGTTAAAATATCCCGATGAACCCCATTCGCCCTACACGGATCGCTCGTTCGAAGATGAAAGTTTCGACCAAAAAGGCAACTATTCGAATAACTTTGGCAACAATGGCAATCAGAAACCCGAATGGAAGCGTTACAAGCAGTACACACGCAATGACATTATGTCCGCCATTCAGTGTGTGCGCGATGGCATGAGTGCTCTGCAAGCTTCTCGTAAATTTGGCGTTCCCTCTCGTACCCTATACGATAAGGTCAAGAAGTTGGGCATTACCACTGGCCGCCCCATGAATCGCACCATGAAACGTAGCCCCAGTAATGTTGAATCTCCGGCCGCATTTCCATTTGCCCATGGTTATGGTCAGGCAGCAGCTGCGGCCATGCATGAGGCAGTGGCCCGTGAGGAGCGGGAAATGAAGGAGCATCATCGTAATTCTGAGCATCATCACATGGCTGCCACAATTCCACACCCAGCCGCCGCTCTTTTAGACCCCGCCTTCTTGCAACAGGCCTTGGAAAATCGTGGTGGTGATATTGCCGGCCGAGAGGCCCTACATGCCATGGCCTTGGCTGCAGCTGCCCATGCTGCCGCCAATCGCATGTCAGCCAGTCCGGGACCAAATGGTAATGCTGTGCGTTCACCAAGTCCCAACAGCTTCTCGCTGAAATATGGCAACATGCGTAATGCTGTGGAACAGGAATTCCTGGAACGCCAtgaaatggaaagggaacgtgaaatggaacgcgagcgtgaaCGTGAAAGAGATTTGGAACGGGAGCAGGAAGAGGAAGAACATGAGCGTAGCAATGAGGAACGTGAACGTGAAGCAGACGATCATGTTGAGGACTTGTCATTGGCCCGTAAAGCTGCCCACACCCCAGTTGAGTCGGGGCGTCCCAGATCTGAATCACCATTCTcacccaccaccaccaacaatgGTGATGACAAATCCGTTATTATGTCCACCAAattgccagccagccaacaatcCACGGCGGAAAATGATAGCTTCATTCATGAATCCAAACTGAAGCGTGAGGTAATAATCGATGATGTTAGAGCTGACTGA
- Protein Sequence
- MGGPPATSNPATSSSGHPEGQTYCLRWNNHKSNLIEILDALIKVESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDMPMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLKEKFHKLSEEHAERTANNPYANTSAPSNPYSSVSTSSAATPQQTTKHNDNENYHHNSSSVISTSSNISPSAAPSSSSSPPYSNYKSPYASLYSKSPAANQSNNNSPAQSTQQTPTHNNNNNNASASERSGQWAMSPSAAAAAAMLSSVYESAPDMNPLKRKKLSSISSMLMNRDTPILRNVLAQANPADSSQPMPLMMPTSGGKGEKMSSTPSSMEKGNGNHSFNGSDYSNDKLKYPDEPHSPYTDRSFEDESFDQKGNYSNNFGNNGNQKPEWKRYKQYTRNDIMSAIQCVRDGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSNVESPAAFPFAHGYGQAAAAAMHEAVAREEREMKEHHRNSEHHHMAATIPHPAAALLDPAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSASPGPNGNAVRSPSPNSFSLKYGNMRNAVEQEFLERHEMEREREMERERERERDLEREQEEEEHERSNEEREREADDHVEDLSLARKAAHTPVESGRPRSESPFSPTTTNNGDDKSVIMSTKLPASQQSTAENDSFIHESKLKREVIIDDVRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01019529;
- 90% Identity
- iTF_01019529;
- 80% Identity
- iTF_01019529;