Mdom005397.1
Basic Information
- Insect
- Musca domestica
- Gene Symbol
- ttk
- Assembly
- GCA_000371365.1
- Location
- Scaffold19758:80696-109195[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-19 6.8e-16 57.4 0.0 2 45 580 624 579 624 0.97 2 2 5.7 1e+04 -4.0 0.7 3 11 657 665 657 668 0.82
Sequence Information
- Coding Sequence
- ATGTCTGTGCAACAATTTTGTTTACGTTGGAACAACCATCAACCAAACTTTATATCGGTCTGCTCATCACTACTACACAATGGCACACTGGTTGATGTGACATTAGCCGCTGAGGGAAGGCAATTGCAGGCACACAAAATCGTGCTCTCAGCGTGCAGTTCATATTTTCAGacaCTTTTCACTTCAAATCCATGCCAACATCCAATTGTTATTTTAAAGGATGTTCAGTACGATGACTTGAAGACAATGGTCGATTTTATGTACTATGGCGAGGTAAATGTATCGCAAGAGCAATTGCCGCATATATTAAAAACGGCAGAAATGCTCAAGATCAAAGGACTAGCGGAGATGCCCACCGATCCAGCCAATTTAACAAAATCCGAAAGCAAATCATCGAACGAAGCCCCAGAATtggttgggggtggtggtggtggcggcaacaatgtgattggtggaagtggcagcagtggtggtaatagcagtggAGGTCTTGGCAGTACCAGCGGCACTGGTAGTGTCAGTGACTCCTTATGGGGTAGTACAGAATttcaacaacaccaacagcaacaacaacaccagcaacaacaacaacagcagcagctgcaacatcaccatcagcagcaacaacaacaccaacatcatcagcagcttcaagcacaagcacagcagcagcaacaacagcagctgcaacatcaccatcagcagcaacaacaacaattacacacacagcttcaaaatagtcaaacccaaacctcacaacaacaacagcagcaacaacaccatcaacaaTTAAGACGCACACCGTCACCACTAGGCGCGGGCGCCTCACCGGCAACCAGGCGAAAACGTTTACGAAAGTCGTCCAATAATGGCTCAGGTGAACGTACCAATTCCGAAGATCATAACACTTCACTGGATGCCGCCACCGCGGGTGGTTTAACGCTGTCACAAATGAGCCAAATGACATTTGGTAGTTCCGCTGCGAATAGCGCTCTTGGTGGTTTAGCAGCACATTCACTGCATACGGCAAAACTGCTTAAGGAGGCATCAAATAATGACTTGGAACATAACCCTCAAGACTCAGATAGTTTAGATGACACCCACGGCCATGTACATATGCAAATTaAACCCGAAGTGGATATCAGTGGCGTTCAACAATCGATGCCATTAGATATATCTGGTGCCACGACTCCATCTGAACACGATGCCCCTAATTCGCAATCTGCACATTCAGGTTTACAATGGACGGTTGTTGAACCAAGTTATTCACGCTTTTCGCTGCCATCCTGTCCCACCAATTTAATTGGCAATAGCAACAATCAAAATCCCAatgccaacaataacaacagttcaagtagcgaacaacaccagcaacgtcaacaacaacagcagcaacagcaagacgctgtgaatagtcaacaacagcagcagcaacaacatttacaacaactgcagcagtaccagcaacaacatcaacaaaattcGGCTTACTCTCCGCAAATAATAACGGTGAGTGGTGGTTACACAAATGCTGCAGTAGCAGCTGCTCAGAACATGTCACCACCCTCGCCCAACGATAGTAATATGGTTCAATCCGTCTATAGTCAGGGACCATCGCCATCTGCCTCGCCGGCAGCCAATAGTTCAGCAACGGGCAGTGGAAGTAATATGGCGGGaaataataatgcaaataataatgccaataTAAAACGAAAACGATCAGTTAATCCACAAGGCGATGAGAATTTTATAAGGGCTCTGGAGGCAGTACGATCTGGTGGGATTGGCTTTTGCAAGGCAGCGCGCCTTTACGGTGTCAACAATAGGACACTATGGTTAGAGTATAAAAAACGCGGTTATCCCGTATCAAGGCCTAGCATAAAGTCGCGTGTTGTGAAACAGGAACCGAACCTTTCACCTTCTCCCCCTCCGCCCGATAATGTCCAAGATGATACCAATGAAAATTACGATCATATGGCCGCAGCAGTAGCTGCAGCCCAAACAGCTGCTCTCAACATGCAAATTCCACCAACATCGGATACACCCACACCTTCGTTAATGTGCGCGCCTCACCACACCGGCGCCACAGGTGGACCCACAGCCCACCCCACTATGGGAGTAATGAGTTTTCTAGACACCCGCCACATGGATTTTCCAGCCAGTTTACACTCGATGTCCCGCCAGCGTTACATTGATGCGACTGGAGCCGGAGGTGGTGCCAGCGCGGGTACTATCAATGTCAATCCAGCAGCTGCAATGAATCTACAGAGTATTAATTTGTCGGCAAGTGTTACAACGGCCGTTCCACCACCCACCCATGCAACACCATCTATATCTGTGTCCACAGCGGTATCATCAGCCACCTGCCTAACGAATACAGCAACGGCTGCAGCAATACTTCAAGCTAATGCCGCAACATATCTTTCTGTTACACCTGGAGTTAGCAATATTATGACCGATGGTGGCCCGTCCGGAGTAGCAAAAAATATGACTCAatcacaccaacaacaacagtcaCAATCCCAAATGGGCACCAAACGTAATCGTGTACTTACTAGGCAACCACGTGTTAAGCGCGACAGTGATAGCTTGTCCAGCAGTCAAATATCGCCAGAGCCCTCAACCGGTAGTTTGGAATTCGAACCATTCAACAATTCATCACAAACCCTGTACACATCTACAACACATCATCCTATGCCGGCCAATGCTCATCAACACCACCAACACGCGCATCACCACTCACAAgctcacaattttctgtctgttcCATCACGAATTGAGCGTCACTCTTCGGAACCAGCGCCAAGTTTGTCGCCAACCTCGCCTCATCATTTAACTGTACCACAGTCAACGCCTTTCTTAATTAAACAACATTCGGACCCCCTATTGCCTAGTCAGCATTCTGAACATCTTGGTGGCATCAGTTGCGGTACATCCTCCAGCAGCGGCAATCTAACAAATCCATTTGCACCTTTACACCGCCAATATTCACATCCGTTATCGGGTAACGCAACTGGAGCATATCTAGCGACAAGTGCTCCCCTACAACATTCTCAACACATATCATTACCCGAATCTATATATGAAACTGCTTCGCCGCCACCAGCCGGctcatctcattatattgtcccGCAAACAACCCCAAACAATCCAGCACAGACACCATCGTCGTCTAACAGTAATAGCAGCGCTACAACTCCAGCGAGTAGTGCAAGTCCcacaaaatcaataaatttgccCCAATTCCAGTCAGCTTATTTGAGTAGTGAAAGAACTGTAACATCAGCTGCGGGCTCACCGCCAATACCTAGAGTTCCTTCGACACAAATGTCCGAACGCAGTGTATCGGAGGATAGTCAAGCGACAGTTGTATCGTGTAACATggctacaacagcaacaaacatgACTACGTCCGCATCATCGGCGAATACAGGGTTGGCGAGTAAATTTCGTAGCTCTAAATCAGTCTCGGCCGTTATGCAAACCGAACGTAGCAGTTCTCTCCAAACAGGCGGCAGTACTTTAGCTTCTTCGAGTGGCGGAGGTAGTTCGTTGGAACATTTACCTACATTACGTGTCAGAAGCGAGGAGTTACAACGATCGGTATCATCTCCACAGACCTCAAGGGAGATGATCaccttagaaaatccacgttctagTCACTGTCCAGTTATTCGGCCTGGACCCGCACTGGGTTGTAATTTTTGTTGGAATACCATCGATGGTCATGGAAGAATTTTGCGACgcaaaactaaataccattgTCCAGAGTGTCAAACGAATTTATGTATTGTGCCATGCTTTCAAGAATATCATGAACGTCTTAATAATGAACAGGAAACAGCTACAACTACGAATGCGAATAACAATAGTAACACAACCAAAAGTTCAACAAGTTCCAGCTCATCAGCACATGTCGGCAGTAACCAAACATCAGAGGCAACAGGATCATCCGGTGGTAGAAGCAGTTCACAAAGTAGTCATGTGGCTACAGGTGGAACTCGACATTATACAAAAACGGAAACGTtttag
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTSNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSESKSSNEAPELVGGGGGGGNNVIGGSGSSGGNSSGGLGSTSGTGSVSDSLWGSTEFQQHQQQQQHQQQQQQQQLQHHHQQQQQHQHHQQLQAQAQQQQQQQLQHHHQQQQQQLHTQLQNSQTQTSQQQQQQQHHQQLRRTPSPLGAGASPATRRKRLRKSSNNGSGERTNSEDHNTSLDAATAGGLTLSQMSQMTFGSSAANSALGGLAAHSLHTAKLLKEASNNDLEHNPQDSDSLDDTHGHVHMQIKPEVDISGVQQSMPLDISGATTPSEHDAPNSQSAHSGLQWTVVEPSYSRFSLPSCPTNLIGNSNNQNPNANNNNSSSSEQHQQRQQQQQQQQDAVNSQQQQQQQHLQQLQQYQQQHQQNSAYSPQIITVSGGYTNAAVAAAQNMSPPSPNDSNMVQSVYSQGPSPSASPAANSSATGSGSNMAGNNNANNNANIKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKSRVVKQEPNLSPSPPPPDNVQDDTNENYDHMAAAVAAAQTAALNMQIPPTSDTPTPSLMCAPHHTGATGGPTAHPTMGVMSFLDTRHMDFPASLHSMSRQRYIDATGAGGGASAGTINVNPAAAMNLQSINLSASVTTAVPPPTHATPSISVSTAVSSATCLTNTATAAAILQANAATYLSVTPGVSNIMTDGGPSGVAKNMTQSHQQQQSQSQMGTKRNRVLTRQPRVKRDSDSLSSSQISPEPSTGSLEFEPFNNSSQTLYTSTTHHPMPANAHQHHQHAHHHSQAHNFLSVPSRIERHSSEPAPSLSPTSPHHLTVPQSTPFLIKQHSDPLLPSQHSEHLGGISCGTSSSSGNLTNPFAPLHRQYSHPLSGNATGAYLATSAPLQHSQHISLPESIYETASPPPAGSSHYIVPQTTPNNPAQTPSSSNSNSSATTPASSASPTKSINLPQFQSAYLSSERTVTSAAGSPPIPRVPSTQMSERSVSEDSQATVVSCNMATTATNMTTSASSANTGLASKFRSSKSVSAVMQTERSSSLQTGGSTLASSSGGGSSLEHLPTLRVRSEELQRSVSSPQTSREMITLENPRSSHCPVIRPGPALGCNFCWNTIDGHGRILRRKTKYHCPECQTNLCIVPCFQEYHERLNNEQETATTTNANNNSNTTKSSTSSSSSAHVGSNQTSEATGSSGGRSSSQSSHVATGGTRHYTKTETF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01019516;
- 90% Identity
- iTF_01019516;
- 80% Identity
- iTF_01019516;