Mdom003927.1
Basic Information
- Insect
- Musca domestica
- Gene Symbol
- Mblk-1
- Assembly
- GCA_000371365.1
- Location
- Scaffold19212:101468-151909[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-12 2e-09 36.7 0.1 1 45 395 440 395 440 0.95 2 2 8.5e-19 1.5e-15 56.3 0.0 1 43 870 913 870 915 0.95
Sequence Information
- Coding Sequence
- CAGAAAGGACACATTTCTTATCAAATTAGTACAacgaaatatttgaataaatattcctttCATTTTCCAGGCTTAGAACGGGTCGCTGAGGAGTTAATGGGGCGCAGGAAATGGAAGCAATATCAAGATACATTAATGCGAACCCACTTAAATTCCGACCAATTTGTCGCAACAATCGGAGACAGCAATATCGAACTGAAGAAAGAGCTGGATAAGCTGAAGCTGGATATTGAGACACTGGAAATTCacaaaacatcaacagcagtcaataacaacaacaacaacaattctaaCCTCGAAGATAACCACCGCCAAGAAATCAATCAGCAACAGCAGAATAAACATCACAATAGCATTAAACAGGAAGAAAAGGATAATACTATACAATTAGAAtcacaagaaaataatttagataCAGCATCACAAATTCAGGGTGTAGAGATTTCTAATCAGAgccacaacaacaccaacagcaattcatcacacaacaacactaaaactaacatcacaaatccaaaGGATAATAATACCGAAAGTGTTGAGAATCGCAAAACACCATCATCACAACAAACAACATCGCCATCGCCATCACCGCCACCTCCCGAACCCATCGATTGGAAACCGAATGAAAAGTGTTATTTCTGCGTTAACGGCAAATTACTCACACTGAACTCCAAAGGTGAACTAGTGGCCGAATCTGGCCCAACTGGGTCTGAAACGGACCACATAAAGAGACTTGACTGTGACAGCGATTCGAATGAGTCCTCTAAATTGCCCACAGTCAGTACAAATGGTAACGTCGCATTAATGACTGGCGCAAATTCTATGACTGGTAGCAATAGCCTGACCCTAAGCAAATTACTAACACAAAAAATGGCTTCAATGGATTCGATGGCAGCCCAGTTTGCAgccattcaaaatatattaccAAATTTAAATTGGATgaatcaacaacagcaacaatctcAACCAGATTCGGTTACACCAACTACCTCAGATACATCAGCCGCCGCTATTAGTCCTTCTCTAAAGGATTCACCCAGTCCCAGTGATGCCACCGGTGAACAACCTTTAGATTTAAGTTCCAAACCGTCTCCAAACTCATCAATAAGTGGTGACTTGAAGAGCGTTAGAATTAAATCATCACGTGCTACACCTGTTCCTTCAACACGTCGCACCTACAGCGAAGAGGACATTAATAACGCCATGCACGAAGTACTTTCTGGTAGATTGGGCACTCGCAAGGCGGCCGTTCAATTCAATGTGCCACGCTCCACGCTGCGcaacaaaatgtacaaaatggcAACGGGTGCCAAACGTGGCGCTGATACCCCCACAGAAATACTACAACAAGAACTCGAAAAAGATTTGTCGGCCGATGAAGCTGAGGGCGATGTGGACAGTAATGCCTCGACGCCACAGCCAGATGATGAGTTGAGACGCATCACCACACCGACAATGTTAAAGAAAATTGCCGCTGCCAATAATGGCGAGGGAGCGATGGATATCGCCGATGAGCCACTTTCGTTGAGCTCACCAAAACCCGCTCACACTGAATCCTCTAAGccccaaacaaataatttactAAACCCTAATGCCGAACTCTCAACACCACCACAGCCACAAATACCCCAAATAGATGCCACGTTACTGTTGCAGACGCTGCTTCTTTCCGACAAAAATCTGCGTGATCTCTTCAGTGCTTTGCTGCTGAATTCCACCATAAATTTAAAGGATGTTCTGCTGGGAGCAACTACAGCAGCCACAACTGCTGCTACGGCGGCGACGGCAGCGGCTGCTGTTGCCGCTGCTGCCACTGTCAATGAGCCAAACACAAATAGTCCAAACAATGGTAACCAACAACAGGACTACCGTTCACTTTTgcaattacttctgcagcagcagcaacaacaacagcagcagcagcaatccTCTTTTGCCCCTGGCCGCCGTTTACCAAAGTCTGATACACCGGAAACGAATTCATCTATGGATCCCAATGAGTCGTGTGATGATCCCTCCTCGGCGATATTGAAAATTCCGTCCTATACACCGGTGGCTGGAACTTCCTCGTCCATGGGACCCAGTAGTTCTCGGGGATCACCTGCTTTGCATTGtcataacagcaacaacagtaaTTCCAATCGTAACGGCGGTGGTGATAGCCCGGGTCCGCTGATGCTGGTGGCAGCCAAAAATCAATTGGGCGCCAACAATAGCTTATCGGTGACACCGCCCCTGCTGCATGGCGGAGTCGATGGCCAAAGTAATCAACCGCTGAGAATGCGTGATGTCATTGCCAATAGCATACATCGGACCATGAGCGAACAGGCCAACAAAGATGTCCTCTTGGGTCTGGTGGCAGATTGTGAGCGCAACAACTCTTCAGGTATGGACTACAAGAAACCCACAATATCAGTGGTGAAAAATATTGGTGGTACTGATACATCGCGTTTTGGAACAGCGCCCAACCTGCTGGCAAATGCTGCAATGCACAATtcacatcatcaccaccacaTGCATGCCCACCATCTGAGAAGTCAGGAAGCAGCAGCCTTGGCTGCTGGCAAAGGAACCCGGCCCAAGCGTGGCAAATATCGCAACTATGACCGCGACAGCTTAGTTGAGGCTGTCAAGGCTGTGCAGCGGGGGGAAATGTCAGTGCACCGAGCTGGTAGTTATTACGGAGTTCCACATTCAACACTAGAGTACAAGGTTAAAGAGCGCCATCTAATGAGGCCGCGAAAGCGTGAACCCAAGCCACAGCCCGGCCTCGATGGTGCCAGCAATAGTTCAAAATCAAATGCCAACATTCCTGCAGGTCTTGACAAATTAAAAGCCGGCAACGGACCGAATGCCAGCCTGAAATTAAGCGGAGCGGCTTTGAAGAGTAACGGTGGCACGGGAACGGCCGGATTTCCGGCAAATGTCGGTAACGGCATGAAACTGCCTATGTTTGATCCCACCTTAGCACATCTGCCCTATGCGCCAACCATGTTTTGGCAACACCAACAAGCCGCCTTCGGCCAATTACAAATGGATTTGAATCGTAATGCCACAGCCGCCAGTAGTGGTGCCTCGCCCACAGAAACGGGCagtgaaatattgaaatcacATATGCAGCGCTATCAGGAGGCCACAAGCGGTGGTGGTAATACAACAAATTCATCAAACGGTCCCAGTCCGATATCCAGTCCTCCCATAATAAGCGGCCATGATATTAATCGAGCGAGGGAGTTGTACGAAACAAATGCTGCCAATGGGGCGAATTTCTTGGACGGTATAATACGTAAGACGCTCGATCGTAAAAGTAATGAAGTTAGTGGCATTCCAAGCAGTAGTAGTAGTGGaggtggcggcggcggcggaGGTGTATTATTGGATCAGTTGTTGATGAAAAAGACCCCATTGCCGTTTACCAACAATCGTGGTATGGTCGATTACAATAGTCTGTCCCATTCGCCGTCCAACAAACGGACTGGTAGTCCCCTGTCATTGCGAGCGGCATCAATTAAACGTGAACGCAACGATAGTGGCAGTGATGACGATGAAACTTCTCAAAGTGGAGCGGATGAGTACGATcgcgaaaataacaacaacaataacacgaGTGGTAGCAGTAAAGGAGGTCATGGTAGTTTGAAAACACTGTTACATCAACGAGATCGTCGTATTGCTTCAAGAGATTCAGCCTCGGAAACCGATGCAAGTAGTTTAAAGAGTGAGCAactgcacaacaacaacaataacaacaacagtagcaGCCATCACATGCATTTGcatcacaacaacaatggcagcaatacgaacaacaacaacaacgttgcCAGTGATATaaatggcggtggtggtggtgccatCAACGTTAAACGTGAAATTCCTACACTCGAATCTGGCACCTCGATACTGCAAGAGAAACTCTCACAAATCAAGTCGGAGCAACAGGAAAACGAAGAGAACTTATAG
- Protein Sequence
- QKGHISYQISTTKYLNKYSFHFPGLERVAEELMGRRKWKQYQDTLMRTHLNSDQFVATIGDSNIELKKELDKLKLDIETLEIHKTSTAVNNNNNNNSNLEDNHRQEINQQQQNKHHNSIKQEEKDNTIQLESQENNLDTASQIQGVEISNQSHNNTNSNSSHNNTKTNITNPKDNNTESVENRKTPSSQQTTSPSPSPPPPEPIDWKPNEKCYFCVNGKLLTLNSKGELVAESGPTGSETDHIKRLDCDSDSNESSKLPTVSTNGNVALMTGANSMTGSNSLTLSKLLTQKMASMDSMAAQFAAIQNILPNLNWMNQQQQQSQPDSVTPTTSDTSAAAISPSLKDSPSPSDATGEQPLDLSSKPSPNSSISGDLKSVRIKSSRATPVPSTRRTYSEEDINNAMHEVLSGRLGTRKAAVQFNVPRSTLRNKMYKMATGAKRGADTPTEILQQELEKDLSADEAEGDVDSNASTPQPDDELRRITTPTMLKKIAAANNGEGAMDIADEPLSLSSPKPAHTESSKPQTNNLLNPNAELSTPPQPQIPQIDATLLLQTLLLSDKNLRDLFSALLLNSTINLKDVLLGATTAATTAATAATAAAAVAAAATVNEPNTNSPNNGNQQQDYRSLLQLLLQQQQQQQQQQQSSFAPGRRLPKSDTPETNSSMDPNESCDDPSSAILKIPSYTPVAGTSSSMGPSSSRGSPALHCHNSNNSNSNRNGGGDSPGPLMLVAAKNQLGANNSLSVTPPLLHGGVDGQSNQPLRMRDVIANSIHRTMSEQANKDVLLGLVADCERNNSSGMDYKKPTISVVKNIGGTDTSRFGTAPNLLANAAMHNSHHHHHMHAHHLRSQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGASNSSKSNANIPAGLDKLKAGNGPNASLKLSGAALKSNGGTGTAGFPANVGNGMKLPMFDPTLAHLPYAPTMFWQHQQAAFGQLQMDLNRNATAASSGASPTETGSEILKSHMQRYQEATSGGGNTTNSSNGPSPISSPPIISGHDINRARELYETNAANGANFLDGIIRKTLDRKSNEVSGIPSSSSSGGGGGGGGVLLDQLLMKKTPLPFTNNRGMVDYNSLSHSPSNKRTGSPLSLRAASIKRERNDSGSDDDETSQSGADEYDRENNNNNNTSGSSKGGHGSLKTLLHQRDRRIASRDSASETDASSLKSEQLHNNNNNNNSSSHHMHLHHNNNGSNTNNNNNVASDINGGGGGAINVKREIPTLESGTSILQEKLSQIKSEQQENEENL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -