Mdom005399.1
Basic Information
- Insect
- Musca domestica
- Gene Symbol
- lov
- Assembly
- GCA_000371365.1
- Location
- Scaffold19758:68606-71602[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.8e-09 1.4e-05 24.4 0.0 8 39 412 443 407 449 0.87 2 4 1.2e-14 2.1e-11 43.0 0.0 5 44 463 502 459 503 0.93 3 4 0.011 19 4.8 0.0 27 37 532 542 528 547 0.89 4 4 3.8e-16 6.8e-13 47.8 0.1 4 41 571 608 571 610 0.93
Sequence Information
- Coding Sequence
- ATGAACCATTTGAAATGGATGGGACACTCGGCTACCATTTTGGAAATACACAAGGGCTTGCGTGACGACTTACAAAGTTGTGAAGTGACCATGGTGGCAGGGAATAGTTCTGTTAAGGCGCACCGATTTGTGTTGTCGTCATGCAGCGACTTATTGAGAAACCTTTTGAGCGACGTTCCATTGCAGCAGGAGTGTTGTATTATGCTACCCGACATATCTGGATATCTGCTGGAAAATGTTCTTTCATTTGTCTATTTGGGCGAGTGTTCTCTTTCTTCGACAAACTTGTCAGAATTCCTCGAAGCTATAAATGTGTTGGGAATTAAAAGTGCTATCAGCTTCGAATGTCACACGAATGCTATGCAAGTGTCCCAGAGTCAGAATATTAACAATAATGCCATAACATCGAATGCACCGGCTAATGTTGGTGTAGGAAGACATGTAAGTGCAAGCGCCGCAGTTCATGGACCTGGCACCACCGTCACCATACAGCACCAGGAAGAATTAATTGAAGCACACGCAGTGTTGCAAACAAGTAACCAGACGACGTTAGCCCCAAATACAAACACTGCGTCCACCAATGAAGAAAATAGAGATCTTGAGTTTATTGATGTATACCAACATGAACCACAACATAAAATCACATATTCTATAGAACATGTTCCCGGATCTACTAATGgcaatgaatttattttaacagaaaattcaGGTACCTTCACACTAACCCAAAACCACAAGTTAGATTCAACATCTAGTTCCGAATCAACCACTATGGAAGTGAACGAAGAGGACGCTTGCGAATCTCATATAATTGAGGAATACAGCAGTGGTGATGAACCGCTGATACACATTGGAAGCACGGATGTTGCATCTgtgacaacaacaaatgtttccACTGCAACGCAAACTAACAATCCCACTCCATCCACTATCAATACGACATCTATAATCGAAATGAAACCAAAGTCATCAATGAAAACTCTTAAGCTAAGAGGTCACACAGCAGCCGCCGGTATTATTCCGAAACTAGATCAAGTAACCCAAAATGAAATTGAGGCAGTGGTTCAAACCACCGATGATGAGGCTATGTCGTCTATGCTGCATAGCAGTGCCGACAGTAGTTATGCTTTGTTGAAAGATACCAGTGCAAATGAATCGATTGGATCagataattcaaaaaatgacTCAACCTACGACGTGAATAATGCTCCGAGTTTAACAGCTACTGACTTAGCATATCAGGCCATGGTAAACGAAGGTATGTCATTGCCAAAGGCCGCTGGTAAATTTAATGTTTCGAAAACTGAACTGTGGAGAAGAGTTCGCAGTACCGGTGTGGAAAGTCTTCAAAAAGTTTCCAAGATATATAACGACAAGATGGACGTCATTGAACTGGCTAGTCAGGCGGTAATAAACGAGGGATTGTCTTTGCAGAAAGCTGCGATACGTTATGATATCTCTAAAACGGTTCTATGGCGACGCGTTCGTAAGCACCCGCAATACATGAAAACAACTCGGGAAAACCCTATTATTTCCAAGGCCTATGAACGTCTTAAGACGGGAGAGTCGCTTAAAAGCATATCGCAAGATCTAGATATACCCATGTCAACGTTGCATCGTCATAAAGTGCGTCTGTCCAATTCAGGGCAATTGCCGGATTTCGTTAGCTGTCGAAAACGTGACAGTGTATCAAAAGATGATTTAAAAGTAAAATTAGCTAAAGCTGTTTATGCTTGTATTCATGAGGGAATGTCTCAGAATCATGCCGccaatttatatgaaatttcaaagagTACATTGTGGCGTCATTTGCAGCGCCGAGTTGCCGAGGCCGAAGGAGCAGAGACCTCAGAGGGAGCCATAGATACCGATGAGAATATCAAGAAGGAAGTAGTTTTATCTTAA
- Protein Sequence
- MNHLKWMGHSATILEIHKGLRDDLQSCEVTMVAGNSSVKAHRFVLSSCSDLLRNLLSDVPLQQECCIMLPDISGYLLENVLSFVYLGECSLSSTNLSEFLEAINVLGIKSAISFECHTNAMQVSQSQNINNNAITSNAPANVGVGRHVSASAAVHGPGTTVTIQHQEELIEAHAVLQTSNQTTLAPNTNTASTNEENRDLEFIDVYQHEPQHKITYSIEHVPGSTNGNEFILTENSGTFTLTQNHKLDSTSSSESTTMEVNEEDACESHIIEEYSSGDEPLIHIGSTDVASVTTTNVSTATQTNNPTPSTINTTSIIEMKPKSSMKTLKLRGHTAAAGIIPKLDQVTQNEIEAVVQTTDDEAMSSMLHSSADSSYALLKDTSANESIGSDNSKNDSTYDVNNAPSLTATDLAYQAMVNEGMSLPKAAGKFNVSKTELWRRVRSTGVESLQKVSKIYNDKMDVIELASQAVINEGLSLQKAAIRYDISKTVLWRRVRKHPQYMKTTRENPIISKAYERLKTGESLKSISQDLDIPMSTLHRHKVRLSNSGQLPDFVSCRKRDSVSKDDLKVKLAKAVYACIHEGMSQNHAANLYEISKSTLWRHLQRRVAEAEGAETSEGAIDTDENIKKEVVLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01019554;
- 90% Identity
- iTF_01019554;
- 80% Identity
- iTF_01019554;