Mdom000519.1
Basic Information
- Insect
- Musca domestica
- Gene Symbol
- kn
- Assembly
- GCA_000371365.1
- Location
- Scaffold18605:61661-168362[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-236 8.6e-232 770.2 0.0 10 385 58 449 50 452 0.98 2 2 2.8e-10 3.9e-06 25.1 15.9 422 513 452 549 448 567 0.73
Sequence Information
- Coding Sequence
- ATGCGTTCCGATGAACCTGTGCCGGGTTTCAGCTCGGCCTCACCCTGGCCCACCTTGGATTTGGAATGGGGCCGCAAATTGTATCCCACAGCGGCACCACGCACCGCCAGCGGCCTTATGTTTGGCCTGCCACCAACAGCCGCCGATTTAAATCAGCCGCGTGGACCCATGACCTCGCTGAAGGAGGAACCGTTGGGCGCCAGGGCCTGGATGCAGCCGGTGGTGGATCAGAGCAACCTCGGCATTGGCCGCGCCCACTTTGAAAAACAACCGCCCAGCAATTTACGAAAAtcaaatttctttcattttgtcATCGCCCTCTACGATCGCGCCGGTCAACCCATAGAAATCGAACGCACCGCCTTTATAGGTTTCATCGAAAAGGATTCGGAATCGGATACAACGAAAACTAATAATGGCATACAATATCGTCTGCAGCTGCTGTATGCAAATGGTGCCCGCCAGGAACAGGACATATTTGTGCGTCTCATCGATTCGGtgacaaaacaaGCTATCATCTATGAGGGCCAAGATAAAAATCCCGAAATGTGTCGGGTACTGTTAACACATGAAGTTATGTGCAGCCGCTGTTGTGACaaaaaaaGTTGCGGCAACCGCAATGAAACACCATCGGATCCTGTCATTATTGATCGgttctttttgaaattcttcttGAAATGCaatcaaaattgtttgaaaaatgctGGCAATCCCCGAGATATGAGAAGATTTCAGGTTGTCATTTCCACCCAGGTGAGCGTGGAGGGCCCCCTCTTGGCCATATCGGACAATATGTTTGTGCACAACAACTCGAAACATGGTCGCCGCGCCAAACGTTTGGACACCACGGAAGGTACAGGCAATCACTCCCTGTCCATAACGGGACATCCCCTTGCGCCTGACAGTACCTATGATGGTCTCTATCCCCCCTTGCCAGTGGCCACACCCTGCATTAAAGCCATATCGCCCAGTGAGGGTTGGACAACAGGTGGCGCCACCGTCATTATTGTGGGAGACAATTTCTTTGATGGCCTGCAGGTGGTGTTCGGTACAATGCTTGTCTGGAGTGAATTGATCACCTCACATGCCATACGTGTCCAGACCCCGCCCCGACATATACCAGGTGTTGTCGAAGTTACTCTTTCGTATAAGAGCAAACAGTTTTGTAAGGGCTCACCGGGAcgttttgtttatgtgtctttaAATGAACCCACCATCGACTATGGTTTCCAACGTTTACAAAAATTGATACCCCGCCATCCAGGAGATCCAGAAAAGCTACAAAAGGAAATCATCTTGAAAAGGGCAGCTGATCTTGTTGAGGCTTTGTACTCAATGCCAAGATCCCCCGGCGGTTCCACCGGCTTCAACTCATATGCCGGCCAATTGGCAGTCAGCGTCCAGGATGGTTCTGGCCAATGGGCCGAAGATGATTATCAAAGGACCCAGTCGAGCAGTGTCAGCCCACGTGGAGGCTATTGCAGCAGTGCATCGACACCCCACAGTTCGGGAGGTTCATATGGGGCCACCACCACAGCTGGTTCAAATGGCTATGGAGCCACAACCAATATGGGTACGTTGTCAACTTCCCCGGGCAGTGTCTTCAATTCCACTTCAACAAGTGCCTTTTCGCCATTAATTTCAACAGTGTCCAGCACCTGGCACCAGGCTTTGGTCCAACATCATCACACACATCCGCATCACTATCACCATCCCCACCAGCCATGGCATAATACAGCCGTTTCAGCAGCCACAGCAGCAGTTTAG
- Protein Sequence
- MRSDEPVPGFSSASPWPTLDLEWGRKLYPTAAPRTASGLMFGLPPTAADLNQPRGPMTSLKEEPLGARAWMQPVVDQSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDTTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNHSLSITGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWAEDDYQRTQSSSVSPRGGYCSSASTPHSSGGSYGATTTAGSNGYGATTNMGTLSTSPGSVFNSTSTSAFSPLISTVSSTWHQALVQHHHTHPHHYHHPHQPWHNTAVSAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00517500;
- 80% Identity
- -