Basic Information

Insect: Musca domestica
Gene Symbol: retn
Assembly: GCA_000371365.1
Location: Scaffold19935:19675-71012[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.7e-26 6.4e-23 80.6 0.0 2 89 266 351 265 351 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.7e-26	6.4e-23	80.6	0.0	2	89	266	351	265	351	0.96

Sequence Information

Coding Sequence: ATGCAACTCAATACCATGGACTGTACAGGGCGTTCAAATGCACCTGAACGTGAGACGGATCTAGCTGACGATATGTCGCATGAACTCCACTCGGATGATGAACTGCGCGATTGCGATTCCGATGAAGGAGACCACATGACAAGAGTTCGATCTCGCCTAAATGCGTCCATGACTAGCAATGGCGGTGCTGACATCAGTGGTCATGAACACACCGGCGATATGCAAATGAGCCAGCACCACCATCATCAGTTTCCAGCAAATCATCCTCTGAACGCTCTCAACAATTTTATGGGTATGGGTGGTTTGCATGGAATACCCAGTCTGCAGCACAACGATGTATTGGAAAAGCTAAAAATGCAAGTGCGTGACATGAAAGTGGGCTTGATGGATCAGGAATATGCTGCTGCACATGCGGCAGCTTTTGGAGCAAATGTGTTGTCCTCGCCAATTAATTCGGCGTTTTCTTTGCCACCCACAACAATGGCTTCCTTTACGCATGCCGCCCAGACGTTGGCGGCACAGGCTAACAATAACCTAAACTCGCACTTGAGTGCAAGTACACCGACAGCTTCAACGCCTGCTGCAGGCGGATGCTTGCCTAATGGAAACCACAATAACAGTTCCAACTTTTCGTTTACCTCACCTACGGTGCCGAATCCAAAAGACGGAAATCCAGCCTCGAATTCGTCAACATCCAGTGAAACTTCAAATTCATCGCAGCAGAACAACGGATGGAGTTTTGAGGAGCAGTATAAACAAGTCCGCCAGTTGTACGAAATCAGCGATGATCCAAAACGTAAAGAGTTCCTTGATGATTTATTTTCGTTTATGCAAAAAAGAGGTACTCCCATCAATCGATTGCCAATTATGGCCAAGTCCGTTTTGGATCTCTATGAGTTATATAACCTGGTAATTGCTCGCGGTGGTTTGGTCGACGTTATTAACAAGAAGTTGTGGCAAGAAATCATAAAAGGCTTGCATCTGCCATCGAGTATTACAAGTGCTGCTTTTACGCTAAGAACACAGTATATGAAATACTTGTATCCGTACGAATGCGAAAAGAAGAATTTAAGCACACCGGCTGAATTGCAGGCAGCCATCGATGGCAACCGTCGGGAAGGTCGTCGTTCCAGTTATGGCCAATATGAGGCAATGCACAATCAAATGCAAATGCCTCCATTGGGACGGCAAGCACTGCCCGGCGGAATGCAACAAATGTCTCCTCTGGCTTTGGTCACACATGCTGCGGCGGCTAACAATCAACAAGCACAGGCAGCTGCAGCAGCCGCCGCGGCACACCACAGACTTATGGCACCCACATTTggtcaagtgccaaatttggtgacgCAGGAAATCGAACAGCGAATGATCGAGTATTTGAAATTGATACAAGTTAAGAAAGAGCAAAATGCAATGGCCAACGGATCGGCTGGCATGGGCTTATcaccgcatcatcaacagcaccaacaacaacatcagcaacaacaacaacagcgagaacaacaacaccagcaacagcagagacagcgttcacagagcccagagaTCAGTCCGACAGAAGCTCTGAATGCTTTGGAGATGTCACGTGTTGCTCTGTGGCAAATGtatcacaacaacagcagtccCCCAGCATCGGAACCAAAGGAGCAAATCACGTTGAACAACAGTAGCGAAGCTCTCAACCTATCGGATTCACCACCAGGTGTAACTACTATAAAGCGCGAACGTGAACGCGAGCCTAGCCCAGACATAACTCAACGTCAGGATTTTCACCACCAACCTCCTCCAGCGAAACGTGCCGGATTCCCTGCTAACTTTTATCTACCACCTAACATGGCCGCTGCTGCAGCGGCTGTTAACTTCCATTATAAAACCGACAATCCACAAGACTCTGATGCAGAGGGCGAAGATGAACATGACGAGGAAGGTGACCACAATACAACGGCTAATTCATCCCATGACGACCCTTTGGAAAGACAACAATTGAATGGCATGTCCGTAAGGCCTCGACACCACGGAAGCAACAGCAGCGTTCACAATGATAAGTCTGATGATTCGGCGATAGAAAATTCGCCTTCCACATCTGCAGCGTCGGGTGGTGGTAATGAACACATTTCTCCAGTCTCTACTAAAAAGATACACCTGTCTAAACAACATAGTCAACATCAAAGTTGTGAATCGAGCGACATTTGCGATGGCAAAAACAGTTTTTCAGCTGTCAGTTCCTCATTGAATCCCTTCGATGCTTTAAATTTATTGTCGGGAATGCAATTCCGCGTCACACGCAACGGTACCAACGAAAATGGCCAACAACAGTTGGTGGTTAACCTTGAATTAAATGGCGTTAAATACTCGGGACTCCTTGTTgccaacacaaacaacaacgtGCCGCCAGCGGTGGTATCCCCAGCTACAGTCAGTACCAAAGATAAAGAATCCAATGACAACATAAATGGAAACATTGGTGACCTGTGTTCAAGAAAAGATAACGCAAGTCCAGCTCCACACTTGACACATAACTTGGAAAAATGTCAGGCTGTGGATACAGCGGCAGCTGAAGAACATGAATTTACAACGCATGATTCTGACACTCTACCCGCGAAGTCGAAACACATAAATCCTGCTTTGAGTAACGGACCTAACACGACCGTGATGACGTCATag
Protein Sequence: MQLNTMDCTGRSNAPERETDLADDMSHELHSDDELRDCDSDEGDHMTRVRSRLNASMTSNGGADISGHEHTGDMQMSQHHHHQFPANHPLNALNNFMGMGGLHGIPSLQHNDVLEKLKMQVRDMKVGLMDQEYAAAHAAAFGANVLSSPINSAFSLPPTTMASFTHAAQTLAAQANNNLNSHLSASTPTASTPAAGGCLPNGNHNNSSNFSFTSPTVPNPKDGNPASNSSTSSETSNSSQQNNGWSFEEQYKQVRQLYEISDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMQMPPLGRQALPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHHRLMAPTFGQVPNLVTQEIEQRMIEYLKLIQVKKEQNAMANGSAGMGLSPHHQQHQQQHQQQQQQREQQHQQQQRQRSQSPEISPTEALNALEMSRVALWQMYHNNSSPPASEPKEQITLNNSSEALNLSDSPPGVTTIKREREREPSPDITQRQDFHHQPPPAKRAGFPANFYLPPNMAAAAAAVNFHYKTDNPQDSDAEGEDEHDEEGDHNTTANSSHDDPLERQQLNGMSVRPRHHGSNSSVHNDKSDDSAIENSPSTSAASGGGNEHISPVSTKKIHLSKQHSQHQSCESSDICDGKNSFSAVSSSLNPFDALNLLSGMQFRVTRNGTNENGQQQLVVNLELNGVKYSGLLVANTNNNVPPAVVSPATVSTKDKESNDNINGNIGDLCSRKDNASPAPHLTHNLEKCQAVDTAAAEEHEFTTHDSDTLPAKSKHINPALSNGPNTTVMTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -