Basic Information

Gene Symbol
Arid4b
Assembly
GCA_000371365.1
Location
Scaffold19546:10855-35621[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.9e-29 6.8e-26 90.2 0.1 1 88 296 381 296 382 0.95

Sequence Information

Coding Sequence
atgcAGCAAGTGGACGATCCTCCCTATTTACAAGTGGGCACGGAAGTCAGTGCCAAATACAAGGGCGCCTTTTGTGAAGCCAAAGTTAGTGAAGTTGTTCGCAATATCAAAGTCAAGGTTGCCTACAAACAGGGCCTAGGTTCTGGTTTAGTATCCGATGATGATATTAAAGCAACGCCTGGACAGCTTAGGGTGGGAGCTGTTGTTGAGGTACGCCACCCCGATCGCAAAGATTATGTTGAGGCGACAGttacaaaaattcaagattGTTCCCAGTATACGGTAGTCTTTGATGATGGCGACATTACAACGTTGAGACGCACGGCTTTATGTTTGAAAAGTGGACGGCATTTTAATGAAAGTGAAACTTTAGATCAGTTGCCTCTCACTCATCCTGAACATTTTGGCAACCCTGTTGTGGGCGGTAGACGTGGCCGTAGACGAGGCCACATGAACGATGGCAGTTCCGATGAAGACGATGAAAGTGATGCCAAAGAGGTTGTCAACGAGAAGGAAGAACATATTGGCAAAGTTGTGTGTGTCGAAACGGaatcaaagaaaaaagataAGGAAAAGTGGTTTCCTGGCTTAGTGGTGGCTCCTACAGCTCAAGCCACGGTACGCATACGGGTTAAAGATGAATATTTGGTGCGTTCATTTAAGGATGGTCGTTATTATACGGTGCCGAAAAAGGAAGCAACTGGCTTCACCCGAGAGGCGGCTGCTAAACAAGATGGTCCCGCAATACAGGCTGCCTTGGAATATCTTGATAGTGATGTTCTGCCCCCACATTGGGAACGAGATGCCTTATTTGCCCTAAGCAATACATCGAGTGAAAATGAAGACGAAATAGATTCCGACTCTTCGGATGATGAGCCACGAGAGGAGAAAGATCGTTTTGTCGCCCAATTGTATAAATATATGGATGATCGTGGAACACCACTTAATAAAGTACCCTCAATACAAAATAAGGATGTTGATTTATATCGACTTTTTCGTGCTGTTCAAAAGAGAGGAGGTTACAATCGTGTAACTGCCCAAAATCAATGGAAATCAATTGCGGTTCGCTTGGGTTTCGCCCCTGTCACNGTTAGCATAACCAATTTGGTTAAACAGGCATATAAGAAATTCCTACAACCTTATGGAGAATTCCATCGTAAGCTGGGTTGTTCCATGTTGATGTCGCCGCGCAACTCAAACCGCAGTAAGGGTCGCAGTTTGGTGCGGGCCAATTCGGTGGCATCGCCAAAACCccaagacaccaacagagaaTCATCGATACCAATTAGCAAATTGGCAACAACTTCAACTTCAAGTACAGCCTCTACATCGGCTGCCGCTGCTGCAAATACCACCACCACTTCCCTGTCAACATCCAACACGAATGTTTCGATTACCGAAGAATCGGAAAATACAAGTGAATCGAGTAGCCAGGATAATACAAATAAAAGTAAACGTAAATCCTCATTGGGAGGTTCCTCTACTGCTGGATCAAGTAGTGGCGTTGCTGCCGCCACTGGTAGTAAGGTCAAAGGGTTGGtggaaaaatatgaagaaaaaaatcttaaagatgATGGTGATGTTCCGTTGTCTAAAATGAAAGCCGCCGCTACCAGTGCaaataaagagaaaagtgaggaaagcgctaaagagaaggagaaagagcgggagcgagaaaaggaacgcgacaaggctgagagggagaaagaaaaggaaaaagacaaagaaaaggaTAGCGGTAGTTCAAAGGATTCTTCGGGTCATGCTACAAGAGATTCATCGCCATCGGGTTCCAATCTCTCAGCCAAAAAGGACAAATCACAACGTAAACAATCATCCCAAAGTGATGACAAACGTAATAAGCGCCGCAAAGATGAAATTGTTGTGGAAAAAATAGATACAGGTGATTTTGTCGTAGAGACGGGAGATAAATTGAAGGTCTACTATCACGAGAAAAAGGTTACGTATGAGGCCAAAGTTTTGGAAATCACATTACAACGTAATACCCCAATGTATTTGGTACACTATACGGGATGGAATAATCGTTACGATGAATGGGTGCCACGGGAACGTATTGCCGAAAATCTAACTAAAGGTTCGAAATTTAAGGGACGTTCGTCGAACAGTAATGAAAAGACAAAAGAGAATCCTCCAAAACCCCCAACTGCATCGTCATTTGCCTCAgctggtagtggtggtggtggcggcagcGGAGGTGGAAATAGTGGTTCAACATCATCCTCGGCTTCCAGCGGCAATCAACAAAATCTCTCATCGGCAGCGGCAAAAACACCAACCGCTGCTGCCAAACGTGGCAGGGGACGTAGTGATTCAATGCCACCACGTTCCACAACACCATCCTCGGTTGCCTCAAACTCCAGTCGTACCAAATCACCAGCCACATCTTCGGCTCTAAAGAAACGTCCCCAGCGACAAATGCAGGGTAATATCAGGCGAACATCGGCAAATGTTTCCGATGTATCCATGGCCACGGAAGAAGAATCCGACACCGATTCAGATGAACCCGTTAAACGACCAAATCGCAACCTAAAAGATTCCCTCAAAACCCGAAAATCACCAGGAAAATCGAAAATGTCCATATCAGCACCGAATAGTCAATCGGAAAGTGAGGACAACGATGAAGATGAGGAGGAGGATGAAGATATGCCATCTACAAGTAAGACAACAACTCCTCGCAAGGGCAGAGATTATGATCTATCACAAATTCGCTCGGAACTTAAGGGTTTCGAGACCATAAAATCATCATCTGCCAATGACTTGGACGATTCGGGCGAAATCAAACATGAGACAAAAGATTCACCTTTGGGtaaaattaaaacagaaaaGCCGGAATTTGATTCAAAATCCTCAACAAATTCAGCCGCTTCATCGGTTATAATTAAGGAGGAATTGAAATCGGAATCCAAGGAGGAACCCCATAAGAGATCCTCAACGGAAGTGTCTTCGGAAACAGATTCCTTTGGCGATGATGAATCACAGTCATCCGATAAGAcaacaaaattggaaaatatgcgCAAGAAATTCCAACAGCTAATTAATGCCGATAAATCTTCTGAAAAATCATCCACAAAGCCACAATCGTTTAGTGGTGCCGGTGGCAATCGggttgtggaaaaaataatcaaGGAGCGCGAATCCGAGAAACGCAATGAAGCTTCAAAAGCAAAGATTACCATCAAGGAGGAAATTAAGCCAACATTGGCATCcttaaaaatggaaatggatATGAAAAGGGATAGCAGCACGCCCATAAAGGATGAAGAAAAGAAATCCCTGATTGGCACACTGGGTTCCGAAATGAAATGCTCTTTAATACAACCCACACGTTTTCCCACCTCGGCAACATCGTCATCGCTAACACCCTCATCAACTCCCAATAAGTATGCCTCGGTAATTGTGGAAAAGCCATTATCTGCTGTCAAGAAATTGGAAACTTCATTTACGAAAAAGGTGGATACTCCCAAGAAGTCCTCGTCGTCGTCTCTAACTGAAAGTCAAATGTCTGTGCACACCATTAAAAAGTTTATTGAGCCAAATGTCCACAAGGAAATATTAAAGGTTGAGCCTCCAGCAGCATGTTCTCCCTCCTCGacatcctctacatcttcttccacatcgtcctcatcatcggccacatcgtcttcTTCGGGCTCTAGATTTTTACCCGATATGAGTAAATTGGATATAAGCGGAACTTCGtcatcttctaattcaacatcatcgccctcaaattccacctcatcatcctcGACAACTTCATACGCCAGTGCCGTAGCCAAGGAACAAAAGGCGGCGGGCAATATTATGACTGTGAACAAGCCACCATCGCCAGATATCTATGAATTCAAAGATACCGAaccatttgaatttgaaatacgcAAATCACCAATGGTGACTggtggcagcagcagcggcgggGGCAGTTCTTCTGTTATAACTGCCAATTTGGGCAGTTCTTTGGCAGCCTCTTTGGCGGCATCTTCAGCTACAACTGGTGGCGCTTTTAGTACCAACACATCGAGTGTTGGGGCAAGCAGTTCGGCACAACGACTCAAGACTTCCGTGAAAACGGATCTACATATGCCCATGGCCCAAAATCCCATGTCGACCATAGTCAAAAACAAGAAACGTGGTTCGCCCATGAAGGAATCGGTCATAGAGAAATCAAAACTATTGAAACTCGACGATAAACCCAGTAATCCAAGTCCTTTGGTACAGGATGCCAAACTTGTACATCATTCTACAATGTCGGGAGGTCCAACGGCCATTGTTAAAACGTCAGCAAGTGCCATGGCCAAGACAGCAGCGGGTACAACAATAATGCATGCTCCGGCACTACCGAAAACCGCTGCTCCCATTAATACGCCAGCCTCAAGTGCTTCATCACTGTTGGCTCCTGTGATAACAGTGCCCCAGAAGCACTCGTCATCCTCTTCAGCAGAAGCGCCATCTGTTTTCGATGCCCTACGTAAATCTCCCAGTTTTAACTTGAATATCAATGCTCTAAATGAAGAGTTGGCACAAACAGTACAAGAAACCACCAGGGCCTTGACAGATGCTTTGCAGACACCTCAGTCACAGGTGATAGTGCCCAATAATCCAAACGAAAGTACACCAACTAAAATGATTGTAAATATGCCTGTCTCTAGTGGTGGTGGACCTAACTTAAAACCTTTGCTccagacaccaccaccaccagcaccacaaccagcagcacacccaccaACTTCTACGGGTGCTGGTACTAGCACATCAGTATCTACTTCACAGACAATACAATCTCCCAAACTTACCACCCCACCGAGCAGTAGTAATACCACCACAACTAAACCTCAAGTGGGAAGTCCATTCATTGAGACCCGAAGTGTTTTTGAACTATCCTTTGGAGCTGGTACCAGTGGCCGGGAGAATAAATTTGAGCTTGAGAATGCCAAGGTGTTGTTGTCGGCTACAGGCGGAGTTTTTGATTTGGATGTTTCGAAATTGGAAACTAAACCTTCAACCTCTTCCATTGCCGATAAAGTCCTCAAAGCCATTTCACagaagaaagaagaagaggagaacaagaaacaagaggaatcaagaaaagaaaaagagggaaCACTTGCAGAACCCACGAAAGAAACAACTGGTCTTTTGGGACTGGCTGCATTAGCGGGTAAAAGTAATTTGGATGCCTTGCCACAGCCATCAACCACTTTCCCAAGTACTTCATCGTCGGTACTGCTAAGTGAACCATTGAAAATCAACACCGACCTAACAGCCGGTCAGGTCTGCACAACACTGTTGAGTGGTCCCCTCAACACATTCTTGGCAAACAAACGCACACCTCTAACATCTCCAGAACCAAAAATGGGCATACTGGAGTCGATGAGTGGTACCAAAAACCAACTATCCGAAACCATACAAAAACTGGAATGTGCCATTCAAAGACGTACACCAGTCACGAGCCATCCTGTAACACCTACCACACCCCTATCGACCACAAATCCCGAGACCTTTTCCGAAGACAGTAATGACAGTACAGATTCTGAAAGACGTTTGGTCATTGAAGATGTTGCCGATGAAACGGccccaccagcaccaccacaaTCTACAGCCACAACATCTGTCGTCGAACAAAAACCCAGTCCTGTGTCATTGCCCAGAACAGAGTCCCCATCATTGTCATCCAAATCAACGGCGACATCCACGACAACGGTAACACCCATTGTCAGCATCAGCAGTAGTAGTTTACCCATTAAACTGGAATCCACATTGGTACCCACGAAAATAGCCTATGCCGCCCAACATGACATTCCTGCACCAATACCCATTAAAGCTGTGACAGCTATTACCGCAACCAGAGCCACAATCACCCCGACCATAGCATCGAATCCAACGAATATTGTCAATATAGTGGCCTCATCAAGTTTGGTGGTGAATAAACCGGGAAGTGGTACTGTGGTATATCCCAATAGCAGTGGTAACCTTAAACCGGTTATACAAACAAATCCCCAATCAAATAGTGCAGTCTCGGCAGCAAACTCTCCACCAGCCTTGCCAAAAAGTGTTGTGGTTATGTCCAGTGGACTGAATTTGCACCAAAACACGACTCAAATTGGAGGCAGTGCGGAGACCACTGCCAGCAACAGCAGTGGTGCAACAAATGTCATATCAACGCAACACGCCAAGCTACAGCAAGGCTTAAGAGTCACGGCTAGTGGTGTGGTGACGGCCTCCAGTACTGGTGTACCCATTGACCTACCCGATATACCAGCCTCAGTGGTTGTGGCCTCCTCGGCTGTACCCTCTGTCATGGCCGCCGCCCAGGCAGCAGCAGCTGCTTTACAAACCCCCAAACAAACACCACAGAAACAAGTGCCACAATCCTCTCAAGCCATTACCCCACCCACACTCAGTGGTGGCAGTATAGCCAAGCCAACACCAATTATACCCATCTCAACGGCATCCGTGTCGAGTCCCCTGCAAAGTCTCATTACCCCCGTCCAAAGTAGTGGTGGTCCCACAGCATTTGTGGCCACAACAAAATCATTTGAGAATTCCACCACCATTAGGCCGATTGTGCCACAGATTATAAAACCCAATATAAGTTCGAGTGGTATACCTTTAACGGTGACCAAAACATCTGGGGGTTTTCATCCAATTACCACCTCAGGTCCACCGGCATCAACGTCTGGTTTCTATTTGGATCCTCGCACTGAACTACGACCCGATGATGGTCTCAAGCCTTTGATTGATATACCCAAACCACAGGGTAgttccacaacaacaacaacgagaattgaaaatatcgcCAGCAGTAGTAATTTGTCCCACCTGGATAGTTCATCCAATTTGCCAGACACCCACAATGATTCCATAAATCAGTTGCGTTGTGAAGAAACCATACCCGGTAGTCCGGCTTCAGTTATAGCAGGACGTGAAGATTCACAAGAGCGTACGGCGACAtctttattgcccgatccaatCGGGTGTGGCGATAAAGATTTCTCCGTTTTAGGTAGTGCTACTAAAACCATAACTGCTGAATCCTCNAACATGGAATCGGCGGCTATTGCGGGCAGTGCTAATGTCAATAGTTCTCCCAATGATTCTGGCAGCCAAGAGGATGAATCAAGTGAAGACATTAAAAAAGATTTGGATCTCGATAGTGGTGTTTCACCACAGAAACGTAGACGTACACGCAAGCAAGGTGATGGAAACACCAGTGGTTCATTGTCCcatgaacagcagcagcagcaacaacagcagcagcagcagcaacaccaacacatacaacagcaaTCGAAGCGACGTCGTGCTatgacaataaataaaaataaaacagCTGGTTCTGATAGCGATGACAATTCAGATAATATTTCCCAACGCAGCGCACACACCCCAAGACACAGTCTACAACAACAGTCCCAGACACAACAAagttcttcatcatcatcaggtTCAAAACCATGTCCATACAATTTCCTGGTACAATTGGATCCCTCCCTTAGCTCAGATCAATGTATAGcaatattattaaaacaaatacaagATTTGCGCAAAACCTATAACATTATTAAAACAGATTTGGCCAGTATTGATCGACGGCGTAAGAAGTTGCGTCGACGAGAACGTGAAAAGAAACAGCTGATGCAGAATCAACAGCAAATGAAGGTGGGCACATAA
Protein Sequence
MQQVDDPPYLQVGTEVSAKYKGAFCEAKVSEVVRNIKVKVAYKQGLGSGLVSDDDIKATPGQLRVGAVVEVRHPDRKDYVEATVTKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGHMNDGSSDEDDESDAKEVVNEKEEHIGKVVCVETESKKKDKEKWFPGLVVAPTAQATVRIRVKDEYLVRSFKDGRYYTVPKKEATGFTREAAAKQDGPAIQAALEYLDSDVLPPHWERDALFALSNTSSENEDEIDSDSSDDEPREEKDRFVAQLYKYMDDRGTPLNKVPSIQNKDVDLYRLFRAVQKRGGYNRVTAQNQWKSIAVRLGFAPVTVSITNLVKQAYKKFLQPYGEFHRKLGCSMLMSPRNSNRSKGRSLVRANSVASPKPQDTNRESSIPISKLATTSTSSTASTSAAAAANTTTTSLSTSNTNVSITEESENTSESSSQDNTNKSKRKSSLGGSSTAGSSSGVAAATGSKVKGLVEKYEEKNLKDDGDVPLSKMKAAATSANKEKSEESAKEKEKEREREKERDKAEREKEKEKDKEKDSGSSKDSSGHATRDSSPSGSNLSAKKDKSQRKQSSQSDDKRNKRRKDEIVVEKIDTGDFVVETGDKLKVYYHEKKVTYEAKVLEITLQRNTPMYLVHYTGWNNRYDEWVPRERIAENLTKGSKFKGRSSNSNEKTKENPPKPPTASSFASAGSGGGGGSGGGNSGSTSSSASSGNQQNLSSAAAKTPTAAAKRGRGRSDSMPPRSTTPSSVASNSSRTKSPATSSALKKRPQRQMQGNIRRTSANVSDVSMATEEESDTDSDEPVKRPNRNLKDSLKTRKSPGKSKMSISAPNSQSESEDNDEDEEEDEDMPSTSKTTTPRKGRDYDLSQIRSELKGFETIKSSSANDLDDSGEIKHETKDSPLGKIKTEKPEFDSKSSTNSAASSVIIKEELKSESKEEPHKRSSTEVSSETDSFGDDESQSSDKTTKLENMRKKFQQLINADKSSEKSSTKPQSFSGAGGNRVVEKIIKERESEKRNEASKAKITIKEEIKPTLASLKMEMDMKRDSSTPIKDEEKKSLIGTLGSEMKCSLIQPTRFPTSATSSSLTPSSTPNKYASVIVEKPLSAVKKLETSFTKKVDTPKKSSSSSLTESQMSVHTIKKFIEPNVHKEILKVEPPAACSPSSTSSTSSSTSSSSSATSSSSGSRFLPDMSKLDISGTSSSSNSTSSPSNSTSSSSTTSYASAVAKEQKAAGNIMTVNKPPSPDIYEFKDTEPFEFEIRKSPMVTGGSSSGGGSSSVITANLGSSLAASLAASSATTGGAFSTNTSSVGASSSAQRLKTSVKTDLHMPMAQNPMSTIVKNKKRGSPMKESVIEKSKLLKLDDKPSNPSPLVQDAKLVHHSTMSGGPTAIVKTSASAMAKTAAGTTIMHAPALPKTAAPINTPASSASSLLAPVITVPQKHSSSSSAEAPSVFDALRKSPSFNLNINALNEELAQTVQETTRALTDALQTPQSQVIVPNNPNESTPTKMIVNMPVSSGGGPNLKPLLQTPPPPAPQPAAHPPTSTGAGTSTSVSTSQTIQSPKLTTPPSSSNTTTTKPQVGSPFIETRSVFELSFGAGTSGRENKFELENAKVLLSATGGVFDLDVSKLETKPSTSSIADKVLKAISQKKEEEENKKQEESRKEKEGTLAEPTKETTGLLGLAALAGKSNLDALPQPSTTFPSTSSSVLLSEPLKINTDLTAGQVCTTLLSGPLNTFLANKRTPLTSPEPKMGILESMSGTKNQLSETIQKLECAIQRRTPVTSHPVTPTTPLSTTNPETFSEDSNDSTDSERRLVIEDVADETAPPAPPQSTATTSVVEQKPSPVSLPRTESPSLSSKSTATSTTTVTPIVSISSSSLPIKLESTLVPTKIAYAAQHDIPAPIPIKAVTAITATRATITPTIASNPTNIVNIVASSSLVVNKPGSGTVVYPNSSGNLKPVIQTNPQSNSAVSAANSPPALPKSVVVMSSGLNLHQNTTQIGGSAETTASNSSGATNVISTQHAKLQQGLRVTASGVVTASSTGVPIDLPDIPASVVVASSAVPSVMAAAQAAAAALQTPKQTPQKQVPQSSQAITPPTLSGGSIAKPTPIIPISTASVSSPLQSLITPVQSSGGPTAFVATTKSFENSTTIRPIVPQIIKPNISSSGIPLTVTKTSGGFHPITTSGPPASTSGFYLDPRTELRPDDGLKPLIDIPKPQGSSTTTTTRIENIASSSNLSHLDSSSNLPDTHNDSINQLRCEETIPGSPASVIAGREDSQERTATSLLPDPIGCGDKDFSVLGSATKTITAESSNMESAAIAGSANVNSSPNDSGSQEDESSEDIKKDLDLDSGVSPQKRRRTRKQGDGNTSGSLSHEQQQQQQQQQQQQHQHIQQQSKRRRAMTINKNKTAGSDSDDNSDNISQRSAHTPRHSLQQQSQTQQSSSSSSGSKPCPYNFLVQLDPSLSSDQCIAILLKQIQDLRKTYNIIKTDLASIDRRRKKLRRREREKKQLMQNQQQMKVGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-