Basic Information

Insect: Morpho deidamia
Gene Symbol: -
Assembly: GCA_029101505.1
Location: JAPJRL010000005.1:6262257-6281334[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.25 21 6.5 0.3 2 23 219 241 218 241 0.93

2 10 0.086 6.9 8.0 0.0 1 23 273 296 273 296 0.96

3 10 0.0023 0.19 12.9 4.3 1 23 338 361 338 361 0.95

4 10 1.8e-05 0.0014 19.6 1.0 1 23 365 387 365 387 0.96

5 10 0.011 0.87 10.8 0.1 2 23 395 415 395 415 0.97

6 10 0.23 19 6.7 1.7 1 21 421 441 421 446 0.92

7 10 6e-06 0.00048 21.1 0.4 1 23 454 477 454 477 0.96

8 10 0.0015 0.12 13.5 4.2 1 23 483 506 483 507 0.97

9 10 0.00029 0.023 15.8 1.7 3 23 518 538 517 538 0.96

10 10 7.6e-05 0.0061 17.6 2.5 2 23 545 567 544 568 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.25	21	6.5	0.3	2	23	219	241	218	241	0.93
2	10	0.086	6.9	8.0	0.0	1	23	273	296	273	296	0.96
3	10	0.0023	0.19	12.9	4.3	1	23	338	361	338	361	0.95
4	10	1.8e-05	0.0014	19.6	1.0	1	23	365	387	365	387	0.96
5	10	0.011	0.87	10.8	0.1	2	23	395	415	395	415	0.97
6	10	0.23	19	6.7	1.7	1	21	421	441	421	446	0.92
7	10	6e-06	0.00048	21.1	0.4	1	23	454	477	454	477	0.96
8	10	0.0015	0.12	13.5	4.2	1	23	483	506	483	507	0.97
9	10	0.00029	0.023	15.8	1.7	3	23	518	538	517	538	0.96
10	10	7.6e-05	0.0061	17.6	2.5	2	23	545	567	544	568	0.95

Sequence Information

Coding Sequence: ATGGAAGAATCTTCGGAAATTTCACTAAGGAGTGTCTGTTGTACCTGTTTATGTATTGATAGGAAACTAAATCAATTGTGTAGAGTGGATAATGGTGTGAACAATTTGTTTTTCCTGCTTTCACACAAATCTGATGCTTATGAgGCAATGTTTGGCAAAGATGCAACACAGTTGTTTATATGCTGGGAGTGTTCTGCATTGATGCAAAGGCTGATTAGCTTCAGGGATCAAGCATGTAAAGCCCAGTCCTGTCTTTCAGATATAGTTGATGGGAAACTTataatttcaaaaataaaatgcttGTCCAAATTGTCCATATCCAAACAAAGTACTTATAATTGTGAATTTGTTATGAATGAGACTTGTCCTGATAATTTTATTGACTGCGGACAAGATATTGACGATATAAAAATCGAAAATGACTTGGATGACATCCCGTTGGCCGAGTTGAgcgattttgaaaatatataccaTCagCAAGAAACAAAAGAGTTAAAAAGAAATACTGAGATAAccgatgtaaaaaaaatttcaaatgagGGTACTTTTATAGTTGGTTCAAATGGTTATCAAACGATACAAATGTCAGATGCTGAAATGCACGAAAgcataaatataagaaaattacaTGAAAAATATGTCAATGCTTTCAGTAAATGTGAAAGTTGCCTTGAAGGTTTCAACGATATCAATGAATTAGAGAAACACAATTTGAAACTTCATAAACCGaggCAGAAATACGTTCAATGCGAAATATGTAAGGTGTATGTAAAATGCAAGTCTTTGTCCATGCATAATGCTAAGCATTATTTGAAATACCAGTGCGGATATTGCGTGCAAGTGTTGTACACATCAAATGATATGGCGGATCACTTGGCGAGTGCTCATTCTAAACACGGAATATCTATTTTTGGATTGGCGAATAGTAAGGTGAAGCGGAAAGTTCCGAAACCGGATTCAAAGatgagaaagaaagaaaatattatcaaaGATAAAATTACATCACAAGGCTACTTGTGTACGGAATGTGACAAACATTTTgaGAATAAGAACCAACGGTACAAGCATATACAGAAAACGCACAGAGAGGGGTTCGCGTGCGACACTTGTGGGAAGAAGTTTCCCTTCAAAAACACATTGCGAAGACATGAACAGATCCACGGCAGTCCTCTGCCTCGCGAGCAGTGTCCTGTGTGCGGCAGGATGGTGCGCCAGGACCTAGTGCGGACCCACGCAAGGATACACCTGCAGCGGGAGGGGTTCGAGTGCGTCGCCTGCGGGAAGAGCTTCGTCTGCCGCGCCTCCTACGAGAACCACCTCAAGTACACCAGGAGCCACGCCGCTAAGGACGTGCACAGGTACAAATGTCCAACGTGCCAGAAGGTATACCGCAGTCCCGGCGAGCTTCGAGACCATGTCAACTACACGCATATGGGACGGACCACGCATAAATGTCCCATTTGCGACAAGGCGCTCGCAACACGCAGGTGTATAACCCGCCACGTCAGGAGAGCTCACCACGGCGTTAAGGAGAACGCTAGAGACAAGATTTGTCAGACTTGCGGGAGAGCCTTCAGAGACAAGAAGTGTCTCCGCGAACACGAGCTGATACACACGGGCGAGAGGCCTTTGTCCTGCGAGATATGTTCCAGAACATTCCGCCAGAGCGCGTCTCTGTACACGCACAAACGACGGGTGCATCATGTGGGACCTCAACAGAGAACCATCCAGCATACTGAGGGGTGA
Protein Sequence: MEESSEISLRSVCCTCLCIDRKLNQLCRVDNGVNNLFFLLSHKSDAYEAMFGKDATQLFICWECSALMQRLISFRDQACKAQSCLSDIVDGKLIISKIKCLSKLSISKQSTYNCEFVMNETCPDNFIDCGQDIDDIKIENDLDDIPLAELSDFENIYHQQETKELKRNTEITDVKKISNEGTFIVGSNGYQTIQMSDAEMHESINIRKLHEKYVNAFSKCESCLEGFNDINELEKHNLKLHKPRQKYVQCEICKVYVKCKSLSMHNAKHYLKYQCGYCVQVLYTSNDMADHLASAHSKHGISIFGLANSKVKRKVPKPDSKMRKKENIIKDKITSQGYLCTECDKHFENKNQRYKHIQKTHREGFACDTCGKKFPFKNTLRRHEQIHGSPLPREQCPVCGRMVRQDLVRTHARIHLQREGFECVACGKSFVCRASYENHLKYTRSHAAKDVHRYKCPTCQKVYRSPGELRDHVNYTHMGRTTHKCPICDKALATRRCITRHVRRAHHGVKENARDKICQTCGRAFRDKKCLREHELIHTGERPLSCEICSRTFRQSASLYTHKRRVHHVGPQQRTIQHTEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -