Basic Information

Insect: Morpho deidamia
Gene Symbol: -
Assembly: GCA_029101505.1
Location: JAPJRL010000005.1:478021-482624[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00022 0.018 16.1 0.9 1 23 323 345 323 345 0.98

2 10 0.0019 0.15 13.2 1.0 3 23 356 376 354 376 0.98

3 10 2.9e-06 0.00023 22.1 0.7 1 23 381 403 381 403 0.98

4 10 6.7 5.4e+02 2.0 5.7 2 23 410 430 409 430 0.96

5 10 0.0029 0.23 12.6 6.2 1 23 436 458 436 458 0.98

6 10 0.00052 0.042 15.0 2.5 1 23 464 486 464 486 0.99

7 10 3.3e-05 0.0027 18.7 1.4 1 23 492 514 492 514 0.98

8 10 0.0003 0.024 15.7 0.6 1 23 520 542 520 542 0.97

9 10 2e-05 0.0016 19.4 2.3 1 23 548 570 548 570 0.98

10 10 0.0004 0.032 15.3 0.1 1 23 576 598 576 598 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00022	0.018	16.1	0.9	1	23	323	345	323	345	0.98
2	10	0.0019	0.15	13.2	1.0	3	23	356	376	354	376	0.98
3	10	2.9e-06	0.00023	22.1	0.7	1	23	381	403	381	403	0.98
4	10	6.7	5.4e+02	2.0	5.7	2	23	410	430	409	430	0.96
5	10	0.0029	0.23	12.6	6.2	1	23	436	458	436	458	0.98
6	10	0.00052	0.042	15.0	2.5	1	23	464	486	464	486	0.99
7	10	3.3e-05	0.0027	18.7	1.4	1	23	492	514	492	514	0.98
8	10	0.0003	0.024	15.7	0.6	1	23	520	542	520	542	0.97
9	10	2e-05	0.0016	19.4	2.3	1	23	548	570	548	570	0.98
10	10	0.0004	0.032	15.3	0.1	1	23	576	598	576	598	0.98

Sequence Information

Coding Sequence: ATGGATTCTAAGATATACTTATCGATTAAAAAGGAACCAACAGAAAGCAGTACAGATGTTACAGTGGAGAATGAAAACATTTACAAACCTTTGCCATCCATGGTTTGTGACACAGATATCAAACAGGAAGCAATTGAGGAGACAACGACAGTGGAATgcgaaaatatatatgataaaatgcTGACCATTAAGGAAGAATTTTGCAACACTCCATTTGAAAGCACCTTCGATGACAAACCTAATGTTCCATCGCATTTATATTTCATGGAAAAGACTTTCAAAGAACAGACTGACCAGCTTGGACTAAAATCAAATTCACTATACACTGAATCTAATTATTCCCACCACATCATATCGTCACCTGCACTTCACTCTGAAACAGGACCTTCCTTACCCAGCTTGCCAGTAGAAGTTAAAAGTGAAGATATCAAAGCAACAATTAAAGAGAGTTTTGAAAATAGTCTAATAACAAACATACCTgagaaaagtaaaaataatctcAAAAGAAAGCGAGCTTCTAACAAATGCAGCAAAAACAAAGTGGAATTAGACACAAAAGATATTAACTTTACTACAAATCAATACAAAATAAAGTGTGAAACTAACTCGGTAACAAAAAGAGACAGTGAATTAGTCACAACCGAAGACAGTTCTTCTACAAATCATAATGAAATAAAGAGTGATACTACCTCAGTCACAAATAATGAAAAACTAAATACACCCAGtttaataagtattgatataagacctattattaatataagtgaTGAATGCACTGATAAATTAACTacagaatatacatataaaatttccaaTCCGAATTCCCAGAGCGAAGATATTGTGAAAGTTAATAATGAATGCAATACTCAGTTACAGtgcaataatattgaaaataaatgttcgtGTGAACTATGCaacattattaataagaaaAGTGTCAGTGTTGATAACTGTGATAACAAGGGATTTGTTTGCAGAGTTTGCAAAAACAAATTCAGTCTCAAAGTGCAATTGGCAAAGCATATGGAAACTCATATAGAAATAACAGATGCCAAACCTTACTGGTGCGACATATGTCCGTACAAAACAAAGCATAAATCTGATATATACACTCACATCAGAATACACGGAGAGAAACCGTATTCTTGTGAGATCTGTCCGTTCAGAACAAGACAGAAGTACAATCTGGTTCGCCATATAAGAATTCACACGGGAGAGTCACAAGTCCAGTGCAATATATGTAAGTGCAAATGCACCGAGAAGACTATTTCAGATCACATGAAAACACATGCAGACGAGAAGCCGTTCTCATGTCATACATGTGATTTTAAATGCAGCAACAAACAGAGTTTGAACGTACACCTGATGAACCACAGGGAGCCCAAACCTTACTCTTGTAACTTGTGCGAGTTCAGGAGTGCCCATAAGGGTCAACTAACCAGTCATATAAGGAAGCACACTGGTGAAAAGCCTTATATATGCAATTATTGCAGTTTCAAAAGTGCAAGGAAGGATCAACTGTCTGCTCATATGCGGAGGCACACTGGTGTAAAGCCTTATAAATGCATTGTTTGTGGTTATAGAAGTGCAAGGAAGGGTAACTTAGATAAGCATATGCAGAGGCACACCGGTGTTAAGCCTCATACATGCAATGTATGCGGTTTCAAAAGTGCAAGGAAGGATAACTTAGATAAGCATATGCAGACGCACACTGGTGAAAAGCCTTATGCATGCAATGTTTGCGGTTTGAAAAGTGCAACGAAGGGTAATATAGATAGGCATATGAAAGTTCATTTTAAATGA
Protein Sequence: MDSKIYLSIKKEPTESSTDVTVENENIYKPLPSMVCDTDIKQEAIEETTTVECENIYDKMLTIKEEFCNTPFESTFDDKPNVPSHLYFMEKTFKEQTDQLGLKSNSLYTESNYSHHIISSPALHSETGPSLPSLPVEVKSEDIKATIKESFENSLITNIPEKSKNNLKRKRASNKCSKNKVELDTKDINFTTNQYKIKCETNSVTKRDSELVTTEDSSSTNHNEIKSDTTSVTNNEKLNTPSLISIDIRPIINISDECTDKLTTEYTYKISNPNSQSEDIVKVNNECNTQLQCNNIENKCSCELCNIINKKSVSVDNCDNKGFVCRVCKNKFSLKVQLAKHMETHIEITDAKPYWCDICPYKTKHKSDIYTHIRIHGEKPYSCEICPFRTRQKYNLVRHIRIHTGESQVQCNICKCKCTEKTISDHMKTHADEKPFSCHTCDFKCSNKQSLNVHLMNHREPKPYSCNLCEFRSAHKGQLTSHIRKHTGEKPYICNYCSFKSARKDQLSAHMRRHTGVKPYKCIVCGYRSARKGNLDKHMQRHTGVKPHTCNVCGFKSARKDNLDKHMQTHTGEKPYACNVCGLKSATKGNIDRHMKVHFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -