Mdei013390.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Morpho deidamia
Gene Symbol
-
Assembly
GCA_029101505.1
Location
JAPJRL010000016.1:2740778-2751713[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.055 4.4 8.6 2.9 1 23 243 266 243 266 0.91
2 25 0.034 2.7 9.3 0.1 3 23 293 314 292 314 0.95
3 25 0.0094 0.76 11.0 1.1 1 23 336 358 336 358 0.98
4 25 0.083 6.7 8.0 1.3 1 23 362 384 362 384 0.86
5 25 0.32 26 6.2 0.8 1 23 388 411 388 411 0.93
6 25 3.9 3.1e+02 2.8 1.6 2 23 418 440 417 440 0.95
7 25 0.0057 0.46 11.7 0.8 3 23 449 470 448 470 0.95
8 25 0.00093 0.075 14.2 4.7 1 23 476 498 476 498 0.98
9 25 7.1e-05 0.0057 17.7 1.0 1 20 504 523 504 524 0.96
10 25 0.0081 0.65 11.2 1.5 1 23 580 602 580 602 0.96
11 25 0.07 5.7 8.3 0.1 2 23 631 653 630 653 0.93
12 25 0.0064 0.52 11.5 0.2 2 23 674 696 673 696 0.95
13 25 0.00092 0.075 14.2 2.1 2 23 702 724 701 724 0.95
14 25 0.0055 0.44 11.8 0.6 1 23 729 752 729 752 0.93
15 25 2.1 1.7e+02 3.6 0.1 2 23 755 777 754 777 0.94
16 25 0.0069 0.55 11.5 1.5 2 22 784 804 783 804 0.95
17 25 0.038 3.1 9.1 0.4 1 23 862 885 862 885 0.90
18 25 2.5 2e+02 3.4 0.1 3 23 914 935 912 935 0.93
19 25 0.19 15 6.9 0.3 3 23 959 981 957 981 0.94
20 25 0.002 0.16 13.2 0.5 3 20 988 1005 986 1009 0.90
21 25 0.014 1.1 10.5 0.9 1 23 1014 1037 1014 1037 0.98
22 25 0.00056 0.045 14.9 0.2 2 23 1043 1065 1043 1065 0.94
23 25 6.2e-05 0.005 17.9 4.7 1 23 1069 1092 1069 1092 0.97
24 25 0.00056 0.045 14.9 0.3 2 23 1099 1120 1098 1120 0.96
25 25 0.0065 0.53 11.5 2.5 1 23 1126 1148 1126 1148 0.97

Sequence Information

Coding Sequence
atggaaTTTAGCGAGATAGTCGTAAAGGAGATACCCGGCTTGTGCCGGTGTTGTTTGTCTGAAGGATGTTACAAAGATCTAAGTACCGAATATAATTGGATGGATGAACAAGAAATCTACGCCGATATGCTTTTGGAATGTTTCGATATAAGTATATCACAGCACATTGAAGGGCCAAATGGTCCAAACCGTCTTATATGCGAGGTGTGTATTACAAGATTGAGAGATGCATGCAATTTTAAGAAGCAAGTGCTGGAATCAGAGAAGAAGTTTGTGGATATGGTCGGGAGAGGTGACTTTAAATCGAAGGCAATGGTATACCAACCGTCCATGAAGTGCGAGCTCTCCTTGGAGCCAGTTGTGGCTGAAGATGCGGAAGTCGAATACCTTGAAGACGACATGGATTTTGACGatGCTAATAGAGATGAGCCATTGGAGCCCTCAGTGTCCGAAGACATAACAGTAGAGATGTTGCCTGTTAAAGGCAAACGAGGCCGACCGAGGAAGACCGTGGTCAAGCAGGAGAGGAAGAAGGCAAAAACTGAGGACAAACCCAAGGCCCACATCGCTAAAGgtcAAAATCGCCAAGATACGGCAACAGAGGCGCGGAGTAAGTCCTCGAACCTCGCAATGTCGGCAACAAAACGTAATCGTATGATGAAAAGGAACGCTGTTATCGTTCTAGAATCGTCCACAGTGTTACCTTTCAAATGGCACCGCCATAACTATCTATGTTTCTTCTGCCATCGGACATTTAAAACTTTAGGACCTCTAAAAGAGCATACGACTAACGATCATAAATCGTCTAGTATAAAATCCGCTGTATCATACCTCAAAAGGGACGAGAAAGTGAAAATTGATGTCTCAAAACCCATTTGTCGGATTTGCGATGAAAATTTCGAAGACATCAATACTCTTATAGATcatcttaaattaaatcataataaGGTCTTCTCGGGAGATGTCGATTACGGTGTTATTCCTTACAAATTAAATGACAATAAGTATGAATGTGCGTTATGCAAGAAAGATTTTCAATACTTCATCAAGTTAAACCAACATATGAATGAACATTATGAAAATTACGTTTGCGAGTTGTGCGGAAAGTCTTTTTTAAGTCAGGATAGGTTACGTTGCCATGCTCTCAGCCACGGATCGGGTTTTCATTGTAAATTATGCCCGGAGATTTTCGACTCTTTAACCCAGAAAGCCAACCACGAGTTAAGGGTGCACGACAAAAGGCGTTTAATCAAATGCTTCTTTTGTCCGGAACTTTTCCAAAACTATGTTCTACGCAAACGTCATCATAACATAGCGCATAACGTGGAGACATCGGCAGCTAACTGTCCAGTTTGTAACAAATCCTTTCACATACTAAGCAAGATGTTGGCGCATATGAAAGAGGTTCACGTGAGAGAAAAGAATTTCTCATGCTCTCTGTGCGATCAGAAGTTCTTTTCAAAGACACACGTACAGAAGCACATGATCAAACATTTCGGAGTGAAAATTCATCAGTGCGAGATTTGTAAGAAGTCATACGCAAGAAAGCAAACTCTCAGAGATCACATGCTTCCTAAATTTGAACTTGACGAGGGTACATTTACAGTAGCAAATATCTTTTCAGATGTAAAACCGCGCAAACACAAAGGCTGCGAGTCTTCGTCGATGCGTAGACGACGAAACCTTCAGTTGTTGTTCAATAACACGACGATAATACCATTTAAATGGAGAGGCCGATATCTCTGCTTCTATTGCAGCAAAGATATACCACAGTATAGCGAATTAAAGAAACATACCAAATCTCACGGCAACTGCTCAACGAAGGACCATTCTTTAAAAGTGCTCAAGGGTGGACAGAATATGGAAATCAAGATTGACATATCCGAAATAAGTTGCGAGATTTGCAACGAAGAGTTTTCAGTTTTTGACGATATTCTCaaacatttatttgttaaacaTAAACTTGAATATGACGGAGATGTTGAAATGGCTCTAGAAGAGTATAGACTGGTCGATCTAAGTTGTTTGATATGCGATGAAAAGTTCACCTATTTCGGATATTTAGTTTCTCACGTCAATAGCAACCATCCGAAAAATTGTCTCATATGTGACAAGTGCAatcagaaatttaataaaaagaggGATCTTTTCTCGCACATAAAAAATTATCACAGGGAAGGTGGCTATATTTGTGACATCTGCCCGCAGAGTTTCAGCTCTTTGAACATACTTAGGAAACATAGGACCAACAGACATTTAACTAGATGTAACATATGCTTATTGAGACTACCCTCGGCTGTACTTAAGCAGAAGCATATGGAAATAGAACATCCAGACGACGGCTCTCAACAATGCGATATTTGTTACAAGGATTTCCATACAAAACAGGGTCTCAAAATGCATTTGCGTAAATGCAAAGGCGATATATTCGATGTAGCTGTCAAAAAAGAAGAGTACGACGCAATGGACATGGATAACGGATGCGAGAACATCAAACGACCAAGTGTAAAACAAATCAGGGAGAACATTGTTATCGTGATAAACATGTCGACGGCGATACCTTTCAACTTTTATAAGAACAAGTTCAATTGCTTCTACTGTTCTCAAGACTTCGCTGATTCGGACTCTATGAGGGAACACACTGTCTTGGTGCATCCGGTGTGTGATGTTAAAGAGAAGTGCATTCGCAAATGTCGGGAGTCTGTCGCGTGCGTGAAAATCGATATTTCGTCGCTCGCTTGCAAGATTTGCTTTGAATCGATGAGCGATTTAGACCCTTTGTTAGATCATCTGATTTCAAAGCACCAAGCGAACTATGATAAATCGATAACGACTTGCCTCCAGCCTTACAAGTTGATCAAGGATCACATGGCCTGCCCGAACTGTCAGAGTGAAGTGTTTCGGTTCTTCGGTACTTTATTGAAACATATGAATAACGAGCATACGAATAATAACATTATCTGCGTATATTGCGGCCAGACATTCAGACGCGACCAAAATCTGAGGGTGCACGTATGGAGACACCATAGGGACGGAAGATTCAAATGCAGCATATGCAATACCGAATGCAATATACCGTCAAGATTGTACATGCACATGGCGACGGCACACGGCGTGAAAGCGGCGAAGTGTCCAAAATGTCCAGAAAGCTTTGCCACCCAATACCTAAGGCAGAAGCATCTGATAGAGGCCCACGATTCTGGCCACAAGTGTTCTTACTGTGGGAAACTGTTCACCAGGAATTCATTTATGAGGGATCATATAAGACGAACCCATTTGAAGGAGAAGAACGTGGAGTGCTCGATTTGTGGAATGAAATTCTTCAACAATATCGTGTTACGTCGTCATATGGTGAAGCATAGTGGGGAGAAAAATTTCCACTGTGATTTGTGCGGTGAAAGGTTTTACTGGCGTAAAAGTTTGCGTACGCATATGGCTAGGCATAATAAGCAAATaagttctatttaa
Protein Sequence
MEFSEIVVKEIPGLCRCCLSEGCYKDLSTEYNWMDEQEIYADMLLECFDISISQHIEGPNGPNRLICEVCITRLRDACNFKKQVLESEKKFVDMVGRGDFKSKAMVYQPSMKCELSLEPVVAEDAEVEYLEDDMDFDDANRDEPLEPSVSEDITVEMLPVKGKRGRPRKTVVKQERKKAKTEDKPKAHIAKGQNRQDTATEARSKSSNLAMSATKRNRMMKRNAVIVLESSTVLPFKWHRHNYLCFFCHRTFKTLGPLKEHTTNDHKSSSIKSAVSYLKRDEKVKIDVSKPICRICDENFEDINTLIDHLKLNHNKVFSGDVDYGVIPYKLNDNKYECALCKKDFQYFIKLNQHMNEHYENYVCELCGKSFLSQDRLRCHALSHGSGFHCKLCPEIFDSLTQKANHELRVHDKRRLIKCFFCPELFQNYVLRKRHHNIAHNVETSAANCPVCNKSFHILSKMLAHMKEVHVREKNFSCSLCDQKFFSKTHVQKHMIKHFGVKIHQCEICKKSYARKQTLRDHMLPKFELDEGTFTVANIFSDVKPRKHKGCESSSMRRRRNLQLLFNNTTIIPFKWRGRYLCFYCSKDIPQYSELKKHTKSHGNCSTKDHSLKVLKGGQNMEIKIDISEISCEICNEEFSVFDDILKHLFVKHKLEYDGDVEMALEEYRLVDLSCLICDEKFTYFGYLVSHVNSNHPKNCLICDKCNQKFNKKRDLFSHIKNYHREGGYICDICPQSFSSLNILRKHRTNRHLTRCNICLLRLPSAVLKQKHMEIEHPDDGSQQCDICYKDFHTKQGLKMHLRKCKGDIFDVAVKKEEYDAMDMDNGCENIKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSQDFADSDSMREHTVLVHPVCDVKEKCIRKCRESVACVKIDISSLACKICFESMSDLDPLLDHLISKHQANYDKSITTCLQPYKLIKDHMACPNCQSEVFRFFGTLLKHMNNEHTNNNIICVYCGQTFRRDQNLRVHVWRHHRDGRFKCSICNTECNIPSRLYMHMATAHGVKAAKCPKCPESFATQYLRQKHLIEAHDSGHKCSYCGKLFTRNSFMRDHIRRTHLKEKNVECSICGMKFFNNIVLRRHMVKHSGEKNFHCDLCGERFYWRKSLRTHMARHNKQISSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00205377;
90% Identity
-
80% Identity
-