Mdei013341.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Morpho deidamia
Gene Symbol
-
Assembly
GCA_029101505.1
Location
JAPJRL010000016.1:2462923-2469863[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.5 40 5.6 0.5 1 21 82 102 82 103 0.95
2 26 0.019 1.6 10.0 0.2 2 23 175 196 174 196 0.97
3 26 0.02 1.6 10.0 0.1 1 23 200 222 200 222 0.95
4 26 0.47 38 5.7 1.3 1 17 227 243 227 250 0.77
5 26 0.012 0.97 10.7 1.2 1 23 256 279 256 279 0.95
6 26 0.0057 0.46 11.7 1.8 1 23 286 309 286 309 0.97
7 26 0.00017 0.014 16.5 0.9 1 23 316 338 316 338 0.96
8 26 2.3e-06 0.00018 22.4 4.0 1 23 344 366 344 366 0.98
9 26 0.00064 0.052 14.7 0.3 2 23 370 392 369 392 0.96
10 26 0.0097 0.78 11.0 0.1 1 20 476 495 476 499 0.94
11 26 6.9 5.6e+02 2.0 1.3 2 23 526 548 525 548 0.92
12 26 0.019 1.6 10.0 7.0 1 23 570 592 570 592 0.98
13 26 0.00016 0.013 16.6 0.5 1 23 596 618 596 618 0.97
14 26 0.0041 0.33 12.2 0.1 1 21 652 672 652 675 0.90
15 26 0.94 76 4.7 0.6 1 22 682 703 682 703 0.95
16 26 0.88 71 4.8 0.1 1 23 750 772 750 772 0.95
17 26 0.053 4.3 8.7 1.3 1 23 819 841 819 841 0.98
18 26 8.4 6.8e+02 1.7 0.7 2 23 865 887 864 887 0.89
19 26 0.0058 0.46 11.7 1.9 3 23 911 931 909 931 0.96
20 26 0.0022 0.18 13.0 5.7 3 23 937 957 936 957 0.97
21 26 0.0023 0.19 12.9 3.1 1 23 964 987 964 987 0.98
22 26 5.5e-05 0.0044 18.0 2.8 1 23 993 1016 993 1016 0.96
23 26 0.0035 0.28 12.4 0.6 1 23 1022 1045 1022 1045 0.97
24 26 0.033 2.7 9.3 2.4 1 23 1051 1073 1051 1073 0.97
25 26 8.9e-07 7.2e-05 23.7 1.1 1 23 1079 1101 1079 1101 0.99
26 26 0.0015 0.12 13.5 5.6 1 23 1107 1129 1107 1130 0.95

Sequence Information

Coding Sequence
ATGGAATTGTGCTTAGGAATTGACAAAAGTTTTCTGTTTTTAGGAGAACGCGCGCAAACAGAAAACAAGCACGCGTTAAAAATTCAGGCAACAGACAGTTTTGAGTTAGTTGCGCCATTAAAGGCTGAAAAAAGACGTTATCAGAGAAGCGCAAGGGCAGAGGCTCGATTTGTCACTAAGAAAAACGCGGGCTCTATACTCGAATGTTGGTCACTTTGCCCCTTCAGGTGGAAAAGGAACAGATTCAAATGCGCATATTGCGAAGACAATTTTACGGAGTGTATCGAACTGAGGGCACACGTTAAACTCTGTGCGACACAGCACAGCATAAAAGATATTTACAGCAAATTCAAGGAAATGTCCCTTATCAACGTCGATGTCACTGAAGCTGCGTGCAGAATTTGCGCGCTACCTTATCGTGGAGTAGCCGAAATGCGTCTTCACGCCAGAGAACACGGTTTCGACTTCGACACGTCCCATCCTGATGGAGTGTTACCGTTTTGTTTGGATAAAGAATCCTGGCGATGTGTTATTTGTCAGGAAATATTCAACAACTTCCTCAAATTATACGAGCACATGAATATACATTACCAACATTATATTTGTGCGACTTGTGGCAAAGGATACATGACAGCGCCCCGGTTGAGGAAGCATTCGGAAGTGCACATAACGGGGACATTTCCGTGTGATAAATGCAAGAGAGTGTTCACGATGCGCGCTGCAAGAGACTACCACAAAAGTCACGCTCACGCTAAAGGACCTCGATACGAATGCCCACATTGTAACATGAGATTTGTTGGCTATTACGAAAGGATGAACCATTTGAATGAGTCTCATAGGGAGAAGGAAGTTGCCTATAAATGTGCACATTGCGAATTGTCTTTCAAGACTAGCGGAAAACGTGCTACGCATGTTAAGTCCGTCCACTTTCCTCAGCAGCGTAACTTTGCCTGTCCGTTTTGTAAATGGTTTTTCAAAACTGGCTATGAATTAAAAAGGCATATAGTTAAGCATACAGGGGAGCGAAATTTTTGTTGTACGCTTTGTGGAAAAACGTTTCCAAGGAACAGGGCTTTGAGGAAACATCTGAAAACGCACGAAGATCTGAATTGTAAATGGTGTGGAGTTATGTTTAACCAAAAGTTACTTCTGGTTGAACATTTGCGCACGAACCATCCAGATATAAGCGATTTCTTGATTTCCGgtTCCGCAAAAGCGGACTCGAGAGATATAGTGGTAGGAGTTAGACGTATTAGGAAGTTAAAGGAAAACGTGTGTGCCAGACAAATGCGTCGCAGGCGACGTGCGAACAATGAGCTGCCTGAAGAATCTGAGAAACGCATAGCTAAAACGATGATGCGTAGAAACGCGTTGATCATTTTAGAATGTTCTACAGCTTGGGCTTTTCGTTGGTTTCAAAGTTCATTTTACTGCTCTTATTGTGACGCCAAGTTTGTGGATCCGTTGCTTCTAAGAGATCACGTAAACCCTCTTCATTTAAACGACAAACCAACAAAACGTATATTCTCAAAGTTAACTGAAAATAATATGGTTAAGGTAGACGTCACAGATTTAAAATGCAGGGCTTGCAATTGTCAAGTCGAAACAATTGACTCTTTGAAAAATCATTTAGTAAAGAGTCATGGTAGATATTTTCATGATGAGTTTAACGATGGTGTTCTTCCCTTTAAACTTGAAACTGATAGATACTGTTGTCAAAAATGTTCTATTTGTTTCACTAGTTTCTCGAAAATTAATGAGCATATGAATACGCATTACCAAAACTATATTTGCGATGCTTGTGGAAAGGCTTTTGTATCTAAATCACGTTTTAGAACACATGTGCAATCTCATGAAGTTGGCAGTTTTCCTTGTGGTGAATGTGATGAAATCCTCGAAACTAGAGCAGCTAGAATGTGTCATAGATTGAGAGTCCATAAAAGAGGTATTCGATACACTTGTCCGAGATGTCCTGAGGTCTTCACCACCTATTATGCGAGAGCAAAACACTTAGTGGATGGACATAATCAACAGAAAATAGTTTACGAGTGTTCTGCTTgcgaaaaattatttgaaacaagTTGTAAACGTGCAGCACATATACGGTCCGAAGACAAAGAGACAAATGGAGGAACCTCAATCAAAATTAAATGGAAAAAGAAAAGACCAGTAGCAGAAGAGAAGGCTAATGCTGCTCTCATTCTTGAATACTCTAACGCTGTTGCATTTAGATGGATGCGGGGAAAATTTATGTGTGCTTATTGTCCTAATATATGCGCAGACCTCGGAGAAATTCGCAGACATTCCATAATACATGATAAACTAGATCTATTCCgCACATTCAAGAAATTTATATGGAAACGGCGACGGAGACTGTATAATGACCAAAGAGATAACGCTGCCATTATAATAGAATATTCTAACGCTTGTCCATTTCGTTGGAAACGCGGCGCTTTCACTTGTTCCCAATGTCCAAGTACATTCGGTCATTTTGCAGACGTTTATAATCATATGCAGGAACATCCAAGCCGTATAGACGCTATGCGTTACGCTCGCCCTTACGATAGTGTTAAATTAGAAATTACAGACTTAAAATGTACAATCTGTTCCGATAATATGAATGATTTGAACCACCTAAAAGATCATCTGATAAATGTTCATCAAAAACCTATAGCAAAGGATATGGACATAGGAGTAACTCCTTTTATATTACGCAATAACGAAATGATTTGCGCTCATTGCTCTGAGCGCTTCTCTCTATTCTCTAAGCTCAACAGTCATATGAACTTGCACTATCCGAATAACATTTGTTGCCACTGTGGCAAATCTTTCACAGCCGCACATAGATTGAAAGCACACCAACTTACCCACGAATCTAATGAATCTGAACACAAGTGTTCAAAATGCGATGAAGTTTTCGAAACACGAGTGCTTAGAAATTATCACATGAATACGAAGCACGCACCGGCGAACCGGTACAGATGTCCTTATTGCAATCAGTCGTTTAAACGTTATTCAGACAGATCGCGACATTTGAAAGAGTCTCACAATCAAAACGTAGAGTATCCTTGCCATTTGTGCTCAGCAGTTTTCGCTTTGTCTGACCAAAGAACTAAACACATACGAAACGTTCACATCAAGCACAAACAATTCCAGTGCGATTGCTGTCAGAGTAAATTCGTCACAGCCGGGCAATTAAAGAGTCACATGGTCAAACATACTGGTTCTAGGGAATTTCAGTGCAACGTATGCAAGAAGAGCTACGCGAGAGCCAGGACGTTGAAGGAACATATGAGAATCCATAATGATGAAAGGAGATTTGCATGCCAGTATTGTAACAACGCGTTCATCCAAAAATGTAGTCTCAAGAGCCATTTAAAGACGCACCATCCCAATATTGAGACTTCTAAGAATGCTATCGattaa
Protein Sequence
MELCLGIDKSFLFLGERAQTENKHALKIQATDSFELVAPLKAEKRRYQRSARAEARFVTKKNAGSILECWSLCPFRWKRNRFKCAYCEDNFTECIELRAHVKLCATQHSIKDIYSKFKEMSLINVDVTEAACRICALPYRGVAEMRLHAREHGFDFDTSHPDGVLPFCLDKESWRCVICQEIFNNFLKLYEHMNIHYQHYICATCGKGYMTAPRLRKHSEVHITGTFPCDKCKRVFTMRAARDYHKSHAHAKGPRYECPHCNMRFVGYYERMNHLNESHREKEVAYKCAHCELSFKTSGKRATHVKSVHFPQQRNFACPFCKWFFKTGYELKRHIVKHTGERNFCCTLCGKTFPRNRALRKHLKTHEDLNCKWCGVMFNQKLLLVEHLRTNHPDISDFLISGSAKADSRDIVVGVRRIRKLKENVCARQMRRRRRANNELPEESEKRIAKTMMRRNALIILECSTAWAFRWFQSSFYCSYCDAKFVDPLLLRDHVNPLHLNDKPTKRIFSKLTENNMVKVDVTDLKCRACNCQVETIDSLKNHLVKSHGRYFHDEFNDGVLPFKLETDRYCCQKCSICFTSFSKINEHMNTHYQNYICDACGKAFVSKSRFRTHVQSHEVGSFPCGECDEILETRAARMCHRLRVHKRGIRYTCPRCPEVFTTYYARAKHLVDGHNQQKIVYECSACEKLFETSCKRAAHIRSEDKETNGGTSIKIKWKKKRPVAEEKANAALILEYSNAVAFRWMRGKFMCAYCPNICADLGEIRRHSIIHDKLDLFRTFKKFIWKRRRRLYNDQRDNAAIIIEYSNACPFRWKRGAFTCSQCPSTFGHFADVYNHMQEHPSRIDAMRYARPYDSVKLEITDLKCTICSDNMNDLNHLKDHLINVHQKPIAKDMDIGVTPFILRNNEMICAHCSERFSLFSKLNSHMNLHYPNNICCHCGKSFTAAHRLKAHQLTHESNESEHKCSKCDEVFETRVLRNYHMNTKHAPANRYRCPYCNQSFKRYSDRSRHLKESHNQNVEYPCHLCSAVFALSDQRTKHIRNVHIKHKQFQCDCCQSKFVTAGQLKSHMVKHTGSREFQCNVCKKSYARARTLKEHMRIHNDERRFACQYCNNAFIQKCSLKSHLKTHHPNIETSKNAID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01017909;
90% Identity
-
80% Identity
-