Mdei013797.1
Basic Information
- Insect
- Morpho deidamia
- Gene Symbol
- -
- Assembly
- GCA_029101505.1
- Location
- JAPJRL010000016.1:4390706-4391316[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.8e-10 9.4e-07 29.1 0.0 3 38 16 51 14 56 0.93 2 3 3.1 5e+03 -2.0 0.0 14 22 97 104 90 104 0.68 3 3 0.9 1.4e+03 -0.3 0.0 22 31 130 139 130 144 0.80
Sequence Information
- Coding Sequence
- atgtctgcatCCCATAAATACAGCAAAAGAAAGAAGTGGGAGAAAGAGGATATGTCCGCTGCGATTATCGCTGTTCGAGAAAAGAGAATGGGATACTTGAAGACTGCTAAACAGTTTAACGTTCCCAGGTCTACCCTCTTTCGATTTGTTAATCATAATGACTCCTCGACTGAATCTGTGATGAATAAAGCTATTGGTCGAAGGCCAGTTTGGGATGGATTTGCTGGAAGATATTGGCTGAAGGGATTTTTAAAACGCCATAATGAAATTTTGTCCATAAGACAGCCAACTGGAACTTCTCAAGCAAGGGCCAACGGATTCTCTAAAGAAAGAGTGGACGAGTTCTTTGACAATCTTGATAAAATCCAGGCTGATAAGCCTTTCCCTGCTGCGCGCATATTCAACGTTGATGAGAGTGGTCTCTCTATTGTTCAGAGTAAAATTCCAAAAATCATTGCGCTcaaaggaaaaaaataa
- Protein Sequence
- MSASHKYSKRKKWEKEDMSAAIIAVREKRMGYLKTAKQFNVPRSTLFRFVNHNDSSTESVMNKAIGRRPVWDGFAGRYWLKGFLKRHNEILSIRQPTGTSQARANGFSKERVDEFFDNLDKIQADKPFPAARIFNVDESGLSIVQSKIPKIIALKGKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -