Basic Information

Gene Symbol
GATA-B_1
Assembly
GCA_947086495.1
Location
CAMTZB010000011.1:20057972-20063669[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.4 1.7e+04 -3.6 0.1 13 19 265 271 265 272 0.87
2 3 1e-17 5e-14 52.5 3.9 1 34 397 429 397 431 0.97
3 3 9e-18 4.3e-14 52.7 5.5 1 34 450 482 450 484 0.98

Sequence Information

Coding Sequence
ATGTTCCCGGCGGCAGTCGACGGAATCCACGTCCGGACTCCGCGCCGAGCCGGTCCGTCCGCTCCCGGGCGCGACCTCGGCCGGTACGGGGGACCGACGCACACTTATTTGAATTACCTATATTATTGGGCGTCAACCGATCCGCTCTCGTTCGTTCACAAGTGCAACCATGTAGCCATGAGCCGCCGTGACCCGCTGTCCGTTGCAGGAGGTGTGGGGCCTGGAGGGCGGGCGGCGCGCGCAGCTGCCGGCCTCGGCCAGCCTCTCGGCCATTGTAGGTTTATCGATGTGTTATCTCTGACGCGAGCGCTCGTGCTCGAAAGGACGCCACCCCCGAGCATACCGTCCCCAGGTTCGGCATCGGCCGCCTCGCCGGGAACCGCCGGCAGCCATCGGGCACGGAACTCGGAACGGAACCGGCCCGCGGAACGTGACGCGCCGGGCCCGTCCCCCCACACCCCGCCCCGCCCCGCGCCGCCCCGCGCCGCCCGCACCGATAAGCCGCGCCACTCGAACCTTCGTCGGCCGCGACGTTTTTTGCAACCGAAGTGTGAGGCCATAAAGCTGTCACTCCCTGACAGCGAGCGCGTCTCCTCCGCGCGGCCCGCGCCCCCACTGTGCCCGCACTGCGCCCGCGCCCGGCGCGCCTCGCACGGTCGTTCGTTCCGTTCACGTTTTCGGTCGTGTCCGGGCCTCGTCCCGCGGCCGACGTGTTCTACTTTGTTTACATTATTTTCTTTCGTCCCGCCCGGCCCGAGCCCGGCCCGCGCCCGGCCCGCGCCGCTCCGTCCCCGTCGCGGCCCGCGCGGCACGCTGCGTGCTAATCTAGCGAGCGAGTCGGCACGTCCTCGCGGACGACGACGACGTGCCGATCCCTCCTCGATCCGGAGAGAGGCGAGCGATCTTCGCTTCGTGCCAATATACGGCGCGGCACATGGCCGTAACGCGACACCGCGCCGCCGCGATAAGCGCGCCCGGTCGGTGCGGCTCTcggcgcgggttcgattctcgcgcCGCGAAGCTGAAGCGACACGGCCGAGTCGCGCGGCGCTCGGGCCCCGGCGCCGGCGGCGAGGCGGCGAGGCGGCCGCCGCGGACGGTATGCTCGGGCCGGCGGGGGCGAGGCGGTGCCAGCTGATGGTGTGTTGCGCAGTCGAGATGGCGGAGTTTTTCACGGAGGGCCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCCGATGGGCAGCAAGCGGCCCGGCGTGCTGTGCAGCAACTGCCAGACGGGCACCACCTCGCTGTGGCGCCGCAACGCGCAGGGCGAGAACGTGTGCAACGCGTGCGGGCTGTACTACAAGCTGCACGGCATCAACCGGCCCATGGCCATGAAGAAGGACTCCATCCAGACGCGGAAGCGGAAACCAAAGAACGCCACgaatctgaagaataaagttaacACCATTAAACTGGAGTTGGAGACCGGCAAGGCCAGCACGACGTGCGTGGTGCGCTCGCCGCTGTCCTTCGGGTACTACGTGCACCACCACCAGCAGTaccagcagcagcagcagcagcagcaggagcagcagcagcagcagcagcacgCCGCCGTCAAGCTGGAGGAGCCGCCGCCGGCGCACGCGCACTCGCAGTCCTATTACGAGGAGGAGTACCGGCGCGCGGAGCCGGCCGAGCGCCTCGAGCGGCCCACCGTGGTGTCGCTGGGCAGCTGA
Protein Sequence
MFPAAVDGIHVRTPRRAGPSAPGRDLGRYGGPTHTYLNYLYYWASTDPLSFVHKCNHVAMSRRDPLSVAGGVGPGGRAARAAAGLGQPLGHCRFIDVLSLTRALVLERTPPPSIPSPGSASAASPGTAGSHRARNSERNRPAERDAPGPSPHTPPRPAPPRAARTDKPRHSNLRRPRRFLQPKCEAIKLSLPDSERVSSARPAPPLCPHCARARRASHGRSFRSRFRSCPGLVPRPTCSTLFTLFSFVPPGPSPARARPAPLRPRRGPRGTLRANLASESARPRGRRRRADPSSIRREASDLRFVPIYGAAHGRNATPRRRDKRARSVRLSARVRFSRREAEATRPSRAALGPRRRRRGGEAAAADGMLGPAGARRCQLMVCCAVEMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRPMGSKRPGVLCSNCQTGTTSLWRRNAQGENVCNACGLYYKLHGINRPMAMKKDSIQTRKRKPKNATNLKNKVNTIKLELETGKASTTCVVRSPLSFGYYVHHHQQYQQQQQQQQEQQQQQQHAAVKLEEPPPAHAHSQSYYEEEYRRAEPAERLERPTVVSLGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-