Mach029784.1
Basic Information
- Insect
- Morpho achilles
- Gene Symbol
- -
- Assembly
- GCA_947086495.1
- Location
- CAMTZB010000030.1:235790-249754[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.056 5 8.6 0.2 2 23 236 258 235 258 0.93 2 10 0.091 8.2 8.0 0.8 1 23 290 313 290 313 0.96 3 10 0.0015 0.13 13.6 3.5 1 23 356 379 356 379 0.97 4 10 1.2e-06 0.0001 23.4 2.8 1 23 383 405 383 405 0.98 5 10 1.1 1e+02 4.5 0.1 2 10 412 420 411 432 0.81 6 10 0.0015 0.13 13.6 2.6 1 21 438 458 438 463 0.94 7 10 1.3e-05 0.0012 20.0 1.2 1 23 471 494 471 494 0.95 8 10 0.00036 0.032 15.5 2.1 1 23 500 523 500 524 0.96 9 10 0.00027 0.025 15.9 2.1 3 23 536 556 535 556 0.97 10 10 3.7e-05 0.0033 18.6 2.4 2 23 563 585 562 585 0.96
Sequence Information
- Coding Sequence
- atggatGATTACACTGTAGAAACGCTACGGAAAATCTGTTGTACTTGCTTAAGTATTGATAGAAAACTATATCAACTATGCAAATTGGAGGATggtataaacaatttattttttctattatcaTCGGATTCTGAGGCATACAAGGCCATGTTTAGCAGAGATGCGACATTGTTGTTCATCTGTTGGGAATGCAGTGCTATAATGCGAAGACAAAAAAGGTTTATTGAACAAGTTTGTATTGCTCAGAAACAGTTGTCAAAAATTATAGATCAACAATTACTTttgAAATCAGCAAATAGCCTTTCTAAATTAACTAGTTTCCATCAAAAcacatataatatacattttttacataGCGATAATATAGACAATTTTATTGATTGTGGACCAGatattaatgatattaaatGTGAACTAGAAACAAATATCAATAACGAATCAAATAGCACTGATGAATACACAACTGAACTAATAGATGAGATAAAAATATCTGaacgtaaaatagaaattaaacctcttttaaagaaaactagaaaattaaaaaaagaaaatatcaataaaaaaggtTCTGTTAAAAGAAAAACAGATGAAACAGAAGATGAAGTTAAAGAAGAaggtttttctaaaataaaaatgactgAAGAGGAAATGGTAGAGCGTGTCGAGATTAAGAAGTTGGAAGAGGTTTATGTTAATGCGACAAGCAAATGTGAGTCTTGTGTAGAAGTGTTTAAAGATGAGAATGAATTGGAAGAACATAATTCAAGATTACATATACAGAAACCAAAATTGATGCAATGCGACATATGtctagtatatataaaattctggTGGCTTCCGGAGCATAGAGATGAACATTACCACAAATACCAGTGTCATCATTGCGAGCTGGTGGGCTACACCCTTATTGAGATTTTGACGCATTTGAGGGTAGTTCACTCGATTAAAGACGCTCTAGCACCGGCTATGTTAAAAAAGATAAAAAGAAAAGCTATGTTAACTAATCCAGTTTTGGCGCCAAAAAAGCAAGACGAAATTTGCATGGACGGAGAATCTCTTTTAGGGTTCAAGTGTAACGAATGCAACAAATATTTCGATAACAGATACCTGCGCTACAAACACATATTGAAGTCGCACAGAGAGGGGCACCAGTGTCCCACCTGTGGGAAAACTTTCGCGTTCAAGAACACACTGAACAAACACCAGCAGGTCCACGCCGACCAGCCAAGGCAGCCGTGTCCGGTTTGCGGCAAGTCGGTACGCGCCGACCGCATCCAGTTCCACGCCAGGATCCATTCGGACCGGAAGTCGTTCGAGTGCGTGTCGTGCGACAAGAGTTTCGTGTCGCATGACTCTTATGAGAAACATCTCAAATATTCCAGGAAACACGCCGTAAGGGACGTACACAAATACAAATGCACGATGTGCGAGAAAGGGTTCAGGACCAAGAGAGAGTTGAATGACCATATCGACTACAATCATATGGAGAAGACGCAGTACAAGTGTCCTATTTGTCATAAGGCTCTGGCGACCCGCCGCTCTGTCACCCGCCACGTCAGCAGAGCCCACCACGGCATCAAGGAGAAGTTGGGCGACAAGATACTATGTCAGACTTGTGGGAAGGCGTTCAGGGACAAGAAGTGTCTCCGCGAGCACGAGCTGATCCACACGGGCGAGAAGCCGCTGTCGTGCGACGAGTGCGGCCGCTCCTTCCGGCAGAGCGCGTGCCTCTACACGCACAAGCGGCGCGTGCACAAGATGGCGGCCAAGCGGGCGCGCGTGCGGCACGCGGCCGCAGAGACATTACCGCGTGCTCTACACGCACAAGCGGCGCGTGCACAAGATGGCGGCCAAGCGGGCGCGCGTGCGGCACGCGGCCGCAGAGACATTGAGGAACACGCTGTAAACGCGGCACAGTACCGCGTGCTCTACACGCACAAGCGGCGCGTGCACAAGATGGCGGCCAAGCGGGCGCGCGTGCGGCACGCGGCCGCAGAGACATGTGAATGA
- Protein Sequence
- MDDYTVETLRKICCTCLSIDRKLYQLCKLEDGINNLFFLLSSDSEAYKAMFSRDATLLFICWECSAIMRRQKRFIEQVCIAQKQLSKIIDQQLLLKSANSLSKLTSFHQNTYNIHFLHSDNIDNFIDCGPDINDIKCELETNINNESNSTDEYTTELIDEIKISERKIEIKPLLKKTRKLKKENINKKGSVKRKTDETEDEVKEEGFSKIKMTEEEMVERVEIKKLEEVYVNATSKCESCVEVFKDENELEEHNSRLHIQKPKLMQCDICLVYIKFWWLPEHRDEHYHKYQCHHCELVGYTLIEILTHLRVVHSIKDALAPAMLKKIKRKAMLTNPVLAPKKQDEICMDGESLLGFKCNECNKYFDNRYLRYKHILKSHREGHQCPTCGKTFAFKNTLNKHQQVHADQPRQPCPVCGKSVRADRIQFHARIHSDRKSFECVSCDKSFVSHDSYEKHLKYSRKHAVRDVHKYKCTMCEKGFRTKRELNDHIDYNHMEKTQYKCPICHKALATRRSVTRHVSRAHHGIKEKLGDKILCQTCGKAFRDKKCLREHELIHTGEKPLSCDECGRSFRQSACLYTHKRRVHKMAAKRARVRHAAAETLPRALHAQAARAQDGGQAGARAARGRRDIEEHAVNAAQYRVLYTHKRRVHKMAAKRARVRHAAAETCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01018916;
- 90% Identity
- -
- 80% Identity
- -