Mach027828.1
Basic Information
- Insect
- Morpho achilles
- Gene Symbol
- -
- Assembly
- GCA_947086495.1
- Location
- CAMTZB010000027.1:2331374-2356265[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0077 0.69 11.4 3.9 1 23 419 441 419 441 0.99 2 15 0.00063 0.057 14.8 0.8 1 23 448 471 448 471 0.96 3 15 0.0097 0.88 11.0 0.2 2 23 505 527 504 527 0.94 4 15 0.035 3.2 9.3 1.2 2 21 537 556 537 561 0.92 5 15 6.4e-05 0.0058 17.9 1.0 1 23 854 876 854 876 0.99 6 15 0.0053 0.48 11.8 5.7 1 23 883 906 883 906 0.97 7 15 3.3 3e+02 3.1 2.1 1 23 910 932 910 932 0.96 8 15 0.00023 0.021 16.1 2.8 1 23 937 960 937 960 0.98 9 15 7.5e-05 0.0068 17.7 0.4 1 23 964 987 964 987 0.97 10 15 0.075 6.8 8.2 0.1 3 22 1000 1019 999 1023 0.93 11 15 0.2 18 6.9 1.1 2 23 1056 1078 1055 1078 0.96 12 15 0.0011 0.1 14.0 0.7 3 20 1095 1112 1093 1115 0.92 13 15 0.00047 0.042 15.2 0.2 1 23 1121 1143 1121 1143 0.98 14 15 2.2e-06 0.0002 22.5 0.2 1 23 1150 1172 1150 1172 0.96 15 15 0.0016 0.14 13.5 0.6 1 23 1178 1201 1178 1201 0.92
Sequence Information
- Coding Sequence
- ATGGAAAGTCTGAAATCTAGTCACATGTCAGAGAGAGATTTAAATGAGAGTGGATTTAGGACTTCACTTACTAACAATGTTTATTCAGCTAAGGTAtcattagaaaatataaataacaagaaTCAAATACATAATAAACCATTGAATATTGTGAAAAAGATATTTGAACCAAACCACTGTGATCTTTATTTCAAAGATGAAAAAGAGTATATTGACCAGGGAAAAGAAATACTACAGTCTGTagatactattaataaaaacagtttAGTTGAAGCTATGACTATTGAAAATGAAGACAATATAGGAAGTAACGAGAAACCAATCAAAGTAGATTCAAACAGTGATGCAGATAGTATCTTTGAAATGAACGTTGAATATGATCTAGAGTTTATAAATAACGATATGGAAACGGATGATGAATTTTTGAATAACGAAATGTTAGATAATGAAAGAGATAGGGATGTTCTGTACATATGCGAAGATGATACCAATATCAGAACTAGAAATTGCAATAGTGTTTTAGACAATGACAATGATGCATTTTTAGATAACGACAGAAATTGTTATAACGATAGTGATGTTGAGATATGTGAAGTAGTCAATAGAACTAGATGTGACAATAGTAATTTGCAATCTCGTCAAAGCAGTGGAAGAAATCAAGCTGACGAAGATGAGTTTCCAATTAATAAATCAAGGAAAATGATGCCTAAGCAAGTTGATTTTGTTAAGTCTAAGAAGAAAAAACCTTTAACAGATGGTATTAAGTTTAATATATCTAAGTTTAGTCCTGAAGTGTTAGCAGATGAATTATTAGATGACGGAAGTGATAACTGGGAGGCTGAATTTTTAAACGACGATGATAGCTATAATACTATAAGTGATATTAGTTGTAATGTAGATTCGGTTTATACTAAAGCAAACAATAATGAAGTAAACAAACAGAATGGAATACTTGCTAAGAAAAACATGAAAATTGGTCCAAAAAAGGGGCTAATTAAATCTAAAATGATTAAAAGTAAACTGGTTAATACTAAAGTGGAAAATAATGAAGTAAGCAAACAAAACCCTAAAATACTTGCTAAGAAAATCATGAAAATTGTTCCAAAAAGTCAAGTTGTGAAAtctaaaataagtaaaagaaaaCCTGCCTATTTAGATGGTCTCAAGTTATTTAAGATAACAGAATTAAGTTATGACGAACAGTTGGTGGAATTTGAGGATAGAAAAGAGTCGCCGCGATACAAGTCGTCCCATTATAAATGTGTTACTTGCTACAAAGGATGCAATACTAAGAAAGCTTATGAGAGACATATTTTGAAACACACAAgggatTTCGGTAATTTCGAATGTTCAATATGCAAATTGCGCTACAGGCGTCGCAATTTCCTCAACGCACACGTTCGCGAAGTACATAGCAACAAATACAACTGCAAGTCTTGTACATTCGTCACAAAGCACAAtaAGGTCTCCAGCTACTTCAGCCACTTACGAATGAAACACCCCTCGGACATCGTGTGCACAATCTGCGGGTCATCGTTCATTGGCGAAAAGGGCCTCCACCAGCACATGCTCCAAATGCACCGTCTCGAAAGTAAGGACCCAGTTCCGACATGCCACCCTTGCGGGATCACCTTTTCGTCCAAGGCCGCATACAAGCAGCACGTCAAGTTGACTTTCAAGCACAGAAAAAATGAGTTTCCTACTGAAAAATTTGTTTCCTGGTATAAAACCGGAAGGATGGCAAACAAAGTGAGAGATGGAATGGTTCGCTCTCAACATTTTACTTCTGATGATTTTCATGTGACAAAAAGTTGTACAAAGAAGCCGAGACATAGTGCTGAGCCACCAATTATACAGGCATGCTTGATATGTCTAGATACAGACAGTAAACTGTATAACCTGAGAAAATATAATTTGGAGGAGGGTTATAGAAATTTGACTGGATGCGAGttCTCCAATGGAGTCAACCTTAATATGATATGCATTACATGTGCTCAAAAGTTGATAAACTTTATTAAGTTCAGAGAGAAGAGTATAAGAGGTCATACACTGTTGATGGAGTTGTTTGAGAAGAATAAATTGataacagtaaaaaatataaaaactataaatagagagaaaaacaatttaacaTCGTCTATATCCAAAAAGATCTTTGAACCTGATCACTGCGATCAACATTTTACATTTACtggtaataatgaaaataattatattgaaataaataaatgtaacataataaatgaaaacatcAAAGATGAATCTAAAGATGAAATggatattaaatttgaaaatttagtcGATGAAAATAATCCAGATATTGATAATACAAAATTCAATAatgaaattgaatttgttgATGAAGTTAGTGAAGCTGAGTTAAATGATAGTGATTCAGATGAAGTTGAACTAAAAGTTAAGGTTACTGATAAAGGCaaggttaaaaaaataaagccaGTTAAAGCTATCAAACTGTTTAAAGTGAGATCGTTGAATTACGAAGAACAGTTAGCTGATGTTGTTAAGAGGAAGGAATCTCCCAATTACCGAAACTCCTTTTACAAATGTACGATTTGTTTTAAAGGATTTAATGATAAGAATGCTTATAATGCACACCTTTTGAGACATACGAATAAATTCGGCGATTTCGAGTGCGCACTATGCGGGCTGCATTTCAAATTGAGGTACCATTTGAGTCATCATATACGGCAGAACCATAGCTGGAGGTATAGCTGTATGACGTGCCCTTTCGTCACCAAGCATAAGAGATCGGCGTACCTCCACGAGCGTTGGCACAAAGGCACCAAATACAAGTGCTCCCATTGCGACGAACAGTTCATCCGAGTTTCGACCTACATGACCCATCTCCGTATAAAGCATCCATCGGAGTTCTCTTGCACGATATGCGGGTATTCCTTCGTCGGCAGAAAAGGACTGGACCAGCATATGAACATGAAACACCGTTTCGAGGACGTCCAGAATGCTTCCGGTCCAATCTGCGAGTCATGCAATATCCGCTTCGCAACAGACGACGCCTATAACCAACACATGAAAGTATCGCCCAAACATAGCAGCGATGGTATCCGCAAACGTAACGACCCGAGTGTGTATTGCAAACGACAATATAAGGGAATCCGCCAACAAACTGCAGAATCGGACCCCGTCACTTGCGAACAgTGCGGCATCGAGCTCAGGGACTACCGTCTATACACCCACCACTTCAAACGGGCCCACCCCGACAAGAACAGGACCAAGTACGCGCCCACCAGTGGGCATTGTCTGTGCGAGCAGTGTGGGAAGGTGTTTCAGAGTCAAGCACTGCTCAGATACCATATGCCGGTGCACTCCGGACAGACAATGTTCACGTGCGACGTCTGCGACAAGGGGTTCATGCTCAGGGCGAACCTTTTGATACACAAGAAGATACACAGCGATACACGAGAGTCGTTCGAGTGCCCCGTGTGCGGGAAGAGCTTCGCGTACCAGTCGAACCGGGCGCGGCATATGGTGCTGCACAACGGCCTTAAACCTTTCAAATGCGAGATTTGCGAGAAGAACTTCTCCACAGCAGCCGAGAGGACCTCGCACGTGGCCCACGTTCACCTCAAGAAGCCGTGGCCCAAACGGAACCGAGGCACGCGAGTCACTCGTCACGTGAGACGCCAGAGGGACACGGCCTCGGTGCAAGACGAGTGA
- Protein Sequence
- MESLKSSHMSERDLNESGFRTSLTNNVYSAKVSLENINNKNQIHNKPLNIVKKIFEPNHCDLYFKDEKEYIDQGKEILQSVDTINKNSLVEAMTIENEDNIGSNEKPIKVDSNSDADSIFEMNVEYDLEFINNDMETDDEFLNNEMLDNERDRDVLYICEDDTNIRTRNCNSVLDNDNDAFLDNDRNCYNDSDVEICEVVNRTRCDNSNLQSRQSSGRNQADEDEFPINKSRKMMPKQVDFVKSKKKKPLTDGIKFNISKFSPEVLADELLDDGSDNWEAEFLNDDDSYNTISDISCNVDSVYTKANNNEVNKQNGILAKKNMKIGPKKGLIKSKMIKSKLVNTKVENNEVSKQNPKILAKKIMKIVPKSQVVKSKISKRKPAYLDGLKLFKITELSYDEQLVEFEDRKESPRYKSSHYKCVTCYKGCNTKKAYERHILKHTRDFGNFECSICKLRYRRRNFLNAHVREVHSNKYNCKSCTFVTKHNKVSSYFSHLRMKHPSDIVCTICGSSFIGEKGLHQHMLQMHRLESKDPVPTCHPCGITFSSKAAYKQHVKLTFKHRKNEFPTEKFVSWYKTGRMANKVRDGMVRSQHFTSDDFHVTKSCTKKPRHSAEPPIIQACLICLDTDSKLYNLRKYNLEEGYRNLTGCEFSNGVNLNMICITCAQKLINFIKFREKSIRGHTLLMELFEKNKLITVKNIKTINREKNNLTSSISKKIFEPDHCDQHFTFTGNNENNYIEINKCNIINENIKDESKDEMDIKFENLVDENNPDIDNTKFNNEIEFVDEVSEAELNDSDSDEVELKVKVTDKGKVKKIKPVKAIKLFKVRSLNYEEQLADVVKRKESPNYRNSFYKCTICFKGFNDKNAYNAHLLRHTNKFGDFECALCGLHFKLRYHLSHHIRQNHSWRYSCMTCPFVTKHKRSAYLHERWHKGTKYKCSHCDEQFIRVSTYMTHLRIKHPSEFSCTICGYSFVGRKGLDQHMNMKHRFEDVQNASGPICESCNIRFATDDAYNQHMKVSPKHSSDGIRKRNDPSVYCKRQYKGIRQQTAESDPVTCEQCGIELRDYRLYTHHFKRAHPDKNRTKYAPTSGHCLCEQCGKVFQSQALLRYHMPVHSGQTMFTCDVCDKGFMLRANLLIHKKIHSDTRESFECPVCGKSFAYQSNRARHMVLHNGLKPFKCEICEKNFSTAAERTSHVAHVHLKKPWPKRNRGTRVTRHVRRQRDTASVQDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -