Basic Information

Gene Symbol
-
Assembly
GCA_947086495.1
Location
CAMTZB010000015.1:3193165-3207837[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.0003 0.027 15.8 0.1 2 23 143 165 142 165 0.96
2 17 0.027 2.4 9.6 0.7 2 23 397 419 396 419 0.96
3 17 0.017 1.5 10.3 0.1 1 20 427 446 427 448 0.95
4 17 0.014 1.2 10.6 0.8 2 23 458 479 457 479 0.94
5 17 1.1 1e+02 4.5 0.5 1 23 495 518 495 518 0.85
6 17 0.0022 0.2 13.1 4.7 1 23 527 550 527 550 0.95
7 17 0.27 24 6.5 0.5 3 23 628 649 626 649 0.90
8 17 6.8 6.1e+02 2.1 2.3 1 23 654 677 654 677 0.89
9 17 5.8e-05 0.0053 18.0 1.8 1 23 683 705 683 705 0.96
10 17 1.7e-06 0.00015 22.9 0.8 1 23 712 734 712 734 0.98
11 17 9.8e-05 0.0088 17.3 2.3 1 23 739 761 739 761 0.96
12 17 0.00043 0.039 15.3 2.6 1 23 767 789 767 789 0.99
13 17 2e-06 0.00018 22.6 1.4 1 23 795 817 795 817 0.98
14 17 6.6e-05 0.006 17.9 1.4 2 23 824 845 824 845 0.97
15 17 0.00064 0.058 14.7 0.3 2 23 853 875 852 875 0.97
16 17 0.0023 0.2 13.0 1.1 1 23 880 902 880 902 0.98
17 17 0.33 30 6.2 4.9 1 23 908 931 908 931 0.97

Sequence Information

Coding Sequence
ATGTCATCTGACGAAACTGACGATGAACCGCTATCTGTATTAGCGGCAGCAAAAAAAACAAATCCTGAAGAATTTTCAGATCGATACTCCGACAGTGATTATGAGATACCgtcaaaaaagaagaagaagaaaaagaaagagcTTCCTATAAAAAAACTAGGTGTCACTATAAAGATTAATCGAAAATTAAGCGCTCTTGTCTCTCCACCTGTGATCGCAAGGCCAATGGATGTTTggttatatttaaaagatttaaatccAACTGGCCCGTACAGCTGTTTGCTTTGCTCTGATTGGTTCATAAATCGGTCTAAAATGATTCTACATTATGCTTTGAATCACAAGAAAGACTTTTGTGGGATTTGCAGATATTTTGTGCCAGACCGGGAAGCATGGGTACTGCACGAGCAGTTTCATTCACCATGGCCTTGCTCTCAATGTGTAGAAACATTTCCCACTGAAGGGCTATTACGGAACCATCTTAGAACAGTGCATAATTTGATTCATTGTCGCTTATGTCACTTTAGAGTCTCAGCTGACGAAAACTACAATTCACACTTATTTCAAAAACATAGTGTCACAAATATGCCTATGAAAGATGAGGAGCTAGTCTGGGAATTAGATTATGAGAATACTGATAAATTTATCTGTCTACTTTGCTCAAAGTCTGATAATACAGTGACAACATTTTTTGGGCATTTTATGGGTATACATCATTTCACCCTTAAATGTCTGACAAGTATAATAGCTGGGAAAGATACACCTTTTTCCGTAAATGGAGCTGATGTTAGTGATAGATTTCTTCGTGAACAGCTAAAAGAATATGGTAGGCTTGGGTATGTGGATTTGGAACCAAAGAGTTTTATACCAAATCAAGAAACAGAAGATATCAAACCTACTACAATTTTACTACCTGAGGTCAAAGAAGAAAATACCAGTGACATGGAGGATAAAATGGAAAAAGAAACCGATTTCAGTGAGAAAGATGAGAACAGTCAAAATAACGATGAAACAATAGATTACAAAGGTGACGAAGATTTTGATATTACACACACAGAAGTTATCCTTATAGAAAAATGTTACCATGAATATCTTGAAAAATCTTTGAATGATGTCAATGAAAAAATAGTTACTGAAGTCTCGCATATAAACTATGACAAGATAAAAGGTGATGCATATATTGATGTTGAATGTTCACTATGCAAAAATAAATTCGATTCTGCTCAATCATTCACAATACATTTGAATAAAATGCATAGTATTAAGACAGTGCCGTTATTTTCATGTAGAATTTGCGCTACAACATTCGATACTTATGTTGATTTAACTAGCCATATTACAGAAGAATTAGGAGATTTTGAAGATTTATGGATATGTCAGTTTTGCGAGAAAGAGTTTGATAACAGAGAACAAACGAGGAGACATTTGACGGAACATTGGAGTGCTCTGGACTATGATAACTGTTTCAGTCCGCATTTGGGGTTCAAGTGTAAATATTGTCCAACATTATTCTGGAATGAGACTGAGAGAGAACTTCACCAGATCAGAGTgcactttaataaatataaggaCCAGTTTTATAAATGTGAGCAATGCTCTAAAACTTTTAGTGATAAgATCTGGTATATACATCATCACCTACAAAATCATTCAAGTGAAGATGATCAATCAAAGTACCTGATCAAGTGCTGCTTATGTTGTGTTGTCGAGGGCACCTATGATAAGATGAGGAGCCACTTTGATGATCAGCATCCGGAAATAAGGAAATTGTATTGCTCTTTGGATGCCTGTGTGTTCAAACCATTGAGCCATCGGAAGTCATTTAAACTACATGTGAAGATGATCCACGGTCCAACAGCTCGTATAGACAGGCCCGTTAACTGCAACGTGTGCAACCGTGAATTTGCGAGCGCGCGTGCGTGCAGTACGCACATGGCGCAAGTACACGGCCCGGGCAAGTTCAAATGCAAACTGTGCAAGGAGGTATTACAGACTATCGACGAGAGGAAACTCCACTACCTCCTCTGCCACCCTGGCCGGCACCCCTTCGAGTGTTCCGAGTGCGGCAAGTCCTTCCAATACAAGTCCTCGCTCTACATGCACAAGCAGGACCACTTGCCGAACAAGCAGAGCTACACGTGCAACTACTGCGGGAAGGTGTTTGCGAAGAAGGACTCGTACCGCGAGCACGTGCAGATCCATGAGGGGCCGCGGCACGCGTGCTCGTACTGCCCCATGCGGTTCGTGCAGCGGTCCAACATGCTGCGGCACGAGCGGCGGCACACGGGCGAGCGACCGTACCGCTGCTCGCACTGCCCGCGGGCATTCGCCGACAAGGGCGCATGCACCGCGCACACCAGAACACATTCACGCGATACGTCGTATGCTTGTCTGTATTGCGGGCAGACGTTCGTTCAGAAATCCAAACTCACATATCATATAAGGAAACACACAGGAGAAAATCTGGAATCATGTACGGTGTGCGCCAAAGTGTTTACCAGCGCGTGTGCTTTACGAGAGCACATGAAAACACATCTCGAGAAGAGGCAAATCGTCAAGTGTCCTCTATGTGATAAGGGCTACCAGGACGAGCGGTACATGCTCCGCCACCTTCGCACGTTGCACACCCGGTCGCAGTTCTCGTGCCCGCTGTGTCACAAGCTGCTGACCAGCGCGGCCGGCCTCCGCCACCATGTGATCACCCACAGCAGCATCAACACCTTCCAGTGCAAATGTTGCTCGAAGTCGTACGCTGTAAAGCGAACTATAGAGAAGCATTTACGTAAACGTCACGGGCTTAGAGGCAACGAAGTGAACATAAAGGATTTCTACAACCGTTTGGAGCCAAGGGAATGCAAGTTGGACCTCGACGAAGAAACGATGACCAGTATATTCGGACCTCCCAAAATGAACATAATACCAGATGTACTTATAAGTGATTTTGTTACTTTCGCcaataagaataaattgaaTCAGAATCTAGCAACCGATGATGAAAATGATGGAAACGAAAGTGAAGCCAATGAAAGTGAGAAAGAGAGTGACGATGAAAAAGAGAAGGTGGAGATAAAGCAAGAAGCTGAAAGTGGTGATGAGGAATTGGAGCCTACGGATTTTGTTAGTGTTAAAATTGAGCCGTTAGATGAGGATCAGGAATAG
Protein Sequence
MSSDETDDEPLSVLAAAKKTNPEEFSDRYSDSDYEIPSKKKKKKKKELPIKKLGVTIKINRKLSALVSPPVIARPMDVWLYLKDLNPTGPYSCLLCSDWFINRSKMILHYALNHKKDFCGICRYFVPDREAWVLHEQFHSPWPCSQCVETFPTEGLLRNHLRTVHNLIHCRLCHFRVSADENYNSHLFQKHSVTNMPMKDEELVWELDYENTDKFICLLCSKSDNTVTTFFGHFMGIHHFTLKCLTSIIAGKDTPFSVNGADVSDRFLREQLKEYGRLGYVDLEPKSFIPNQETEDIKPTTILLPEVKEENTSDMEDKMEKETDFSEKDENSQNNDETIDYKGDEDFDITHTEVILIEKCYHEYLEKSLNDVNEKIVTEVSHINYDKIKGDAYIDVECSLCKNKFDSAQSFTIHLNKMHSIKTVPLFSCRICATTFDTYVDLTSHITEELGDFEDLWICQFCEKEFDNREQTRRHLTEHWSALDYDNCFSPHLGFKCKYCPTLFWNETERELHQIRVHFNKYKDQFYKCEQCSKTFSDKIWYIHHHLQNHSSEDDQSKYLIKCCLCCVVEGTYDKMRSHFDDQHPEIRKLYCSLDACVFKPLSHRKSFKLHVKMIHGPTARIDRPVNCNVCNREFASARACSTHMAQVHGPGKFKCKLCKEVLQTIDERKLHYLLCHPGRHPFECSECGKSFQYKSSLYMHKQDHLPNKQSYTCNYCGKVFAKKDSYREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYRCSHCPRAFADKGACTAHTRTHSRDTSYACLYCGQTFVQKSKLTYHIRKHTGENLESCTVCAKVFTSACALREHMKTHLEKRQIVKCPLCDKGYQDERYMLRHLRTLHTRSQFSCPLCHKLLTSAAGLRHHVITHSSINTFQCKCCSKSYAVKRTIEKHLRKRHGLRGNEVNIKDFYNRLEPRECKLDLDEETMTSIFGPPKMNIIPDVLISDFVTFANKNKLNQNLATDDENDGNESEANESEKESDDEKEKVEIKQEAESGDEELEPTDFVSVKIEPLDEDQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01018794;
90% Identity
iTF_01018794;
80% Identity
-