Mach027918.1
Basic Information
- Insect
- Morpho achilles
- Gene Symbol
- -
- Assembly
- GCA_947086495.1
- Location
- CAMTZB010000027.1:3416016-3417743[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0013 0.12 13.8 3.7 1 23 208 230 208 230 0.98 2 13 1.3e-05 0.0012 20.1 1.4 1 23 236 258 236 258 0.98 3 13 6.4e-05 0.0058 17.9 2.4 1 23 264 286 264 286 0.98 4 13 0.00039 0.035 15.4 4.3 1 23 292 314 292 314 0.98 5 13 0.33 30 6.2 2.6 1 23 320 342 320 342 0.97 6 13 0.0027 0.25 12.8 4.6 1 23 348 370 348 370 0.98 7 13 6.9e-05 0.0062 17.8 3.0 1 23 376 398 376 398 0.98 8 13 0.0081 0.73 11.3 2.2 1 20 402 421 402 423 0.94 9 13 2.2e-05 0.002 19.3 4.7 1 23 428 450 428 450 0.98 10 13 0.0035 0.32 12.4 7.6 1 23 456 478 456 478 0.99 11 13 0.0019 0.17 13.3 4.4 1 23 484 506 484 506 0.98 12 13 0.00021 0.019 16.3 2.9 1 23 512 534 512 534 0.98 13 13 1.9e-05 0.0017 19.5 5.6 3 23 541 561 539 561 0.96
Sequence Information
- Coding Sequence
- ATGAAAAAAAAAGGAGTAGCCAAATGTGAAAAATATGCTTACAAAGCAACAGCTCTAAAGACAGCAGAAATAAATAATGTGATTGCTAAAATAAGACCAACAAATGTTGAAATTAATGAAGAATTAAAGATGGAAATAGAAAGTGAAGATATATACAAACCTAAAGTATTTGATCTTGAGATCAACAACAAAATGAATACTGATTCTCATCTCCAGTTAATTAAACCAGGAAATGTTGACATGAATGAAGAATTTAAGAAAGAAGCAGAAAGTATAGATCAGTCAAAACCTAAAGTCAATCTTGAGATTAGCCCTGAAATGAATACGGAATCTTTACTACATTTAATTAAACCAGAAAATGTTGTTATAAAGGAAGAATTAAAGAAAGAAACAGAAAGTGTAGATATATCAAAAGCTAAAGTTAATCTTGAGATTAGTCCTGAAATGAATACGGAATCTCTAATGCATTTAATTAAATCAGAAAATGTTGATTTAAATGATGAATTAGAGAAAGAAAGTGATGGTGTAATAAAACCTAAAAGCAATCTTGATATCAGCCCTGACACGAATACAGAATCTCATCTGCAATTACGGACAAGTAAAGCGAATATCGAAAACATATATGCATGTCGTCATTGCACATTTGTAACTAAGTATAGAAGCAGTTTGACAGTACATATTAAAAAGCACACTGGTGAAAAACCTTTCGCATGCAGTGTTTGCGATCATAAATTTGGACAGAAGATTCAATTAGTCAACCATATGCGTACGCATACTGGAGAGAAACCATATTCCTGCAATATATGTGGATATAAATGTGGGAGAAAGGATAGATTGATGATCCACATGAAATCTCATTACGGAGAGAAACCATATTCGTGCAATACAtgcaattataaatgtaaactcAAACAGAACTTAGTAAGTCATATGCGGATTCACAGTGGAGAAAAGCCTTATGCTTGCGATATATGCATGTATAGATGCAGTTGGAAACAACATTTGGTCGCTCATATGACGACTCATACTGGAGAAAAACCTTTTTCTTGCAACTTTTGCAGTTACAAATGTAGAGTCAAACAGAGTTTAGTCCAACATATACGGACTCATACGGGAGAGAGACCTTACACTTGCAACATATGCCTAAATAAGTTCTGTCAAAAGAATAACTTAATGAAACACATGGCTGTGCATAATAAAACTTACTCGTGCAATATATGCAATTATAAATGTAGTTTGAAGACTAGTTTAGTTAAGCATAGAGAAAGCTGTGCGAAACCCTTTATATGTAACTATTGTGGGTTTAAATGTAGTCAGAAACATAACTTAGTTAGCCATATAAGGATACACACTGGTGAGAAACCGTTCAAATGTAATGTATGCAAGTTTAAGTGCTGTAAGAAGGGCGATTTGGATCGCCATCTGAGAACTCATACTGGTGAGAAACCCTATTCTTGTGATCTCTGCGAATATAGATGTGGTCGGCAACACAGTTTGGACAAGCACATGCTAACTCATACTGGCGAGAAACCTTTTCCTTGCAGCTTGTGCGATTACAGATCTAGTTACAAACACAGTTTGGTCAAGCACATGAGCACCCATTTTGACGGGCCACACCTTTGTAAGATATGTGGGCATAAGTATTCGAGGAAATATGATTTGGTACGACATATGAAGAAACATGATCGAATAAATTCCATAGATAAATTATTCAGAATGATCAACTAA
- Protein Sequence
- MKKKGVAKCEKYAYKATALKTAEINNVIAKIRPTNVEINEELKMEIESEDIYKPKVFDLEINNKMNTDSHLQLIKPGNVDMNEEFKKEAESIDQSKPKVNLEISPEMNTESLLHLIKPENVVIKEELKKETESVDISKAKVNLEISPEMNTESLMHLIKSENVDLNDELEKESDGVIKPKSNLDISPDTNTESHLQLRTSKANIENIYACRHCTFVTKYRSSLTVHIKKHTGEKPFACSVCDHKFGQKIQLVNHMRTHTGEKPYSCNICGYKCGRKDRLMIHMKSHYGEKPYSCNTCNYKCKLKQNLVSHMRIHSGEKPYACDICMYRCSWKQHLVAHMTTHTGEKPFSCNFCSYKCRVKQSLVQHIRTHTGERPYTCNICLNKFCQKNNLMKHMAVHNKTYSCNICNYKCSLKTSLVKHRESCAKPFICNYCGFKCSQKHNLVSHIRIHTGEKPFKCNVCKFKCCKKGDLDRHLRTHTGEKPYSCDLCEYRCGRQHSLDKHMLTHTGEKPFPCSLCDYRSSYKHSLVKHMSTHFDGPHLCKICGHKYSRKYDLVRHMKKHDRINSIDKLFRMIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -