Mach030263.1
Basic Information
- Insect
- Morpho achilles
- Gene Symbol
- -
- Assembly
- GCA_947086495.1
- Location
- CAMTZB010000031.1:2271880-2274852[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.038 3.4 9.2 3.8 1 23 57 80 57 80 0.93 2 19 0.0044 0.4 12.1 3.0 2 23 151 172 150 172 0.97 3 19 0.0011 0.1 14.0 1.4 2 23 177 198 176 198 0.94 4 19 0.0036 0.32 12.4 1.1 1 23 203 226 203 226 0.89 5 19 0.0085 0.77 11.2 3.4 1 23 233 256 233 256 0.93 6 19 0.0031 0.28 12.6 3.2 2 23 264 286 263 286 0.97 7 19 3.9e-05 0.0035 18.6 0.6 1 23 292 314 292 314 0.98 8 19 9.7e-06 0.00088 20.5 2.8 1 23 320 342 320 342 0.99 9 19 3.9e-05 0.0036 18.6 2.9 1 23 348 371 348 371 0.98 10 19 0.019 1.7 10.1 3.5 3 23 415 436 413 436 0.96 11 19 0.075 6.8 8.2 0.1 2 23 462 483 461 483 0.96 12 19 0.021 1.9 10.0 1.2 2 23 506 527 505 527 0.97 13 19 0.0034 0.31 12.5 0.0 2 23 532 553 532 553 0.96 14 19 0.035 3.1 9.3 1.7 1 22 558 579 558 581 0.87 15 19 0.0015 0.13 13.6 4.4 2 23 589 611 588 611 0.96 16 19 0.0074 0.67 11.4 2.6 2 23 619 641 618 641 0.97 17 19 0.12 11 7.6 5.5 1 23 647 669 647 669 0.98 18 19 5.5e-06 0.0005 21.3 1.2 1 23 675 697 675 697 0.99 19 19 4.3e-05 0.0039 18.4 4.5 1 23 703 726 703 726 0.98
Sequence Information
- Coding Sequence
- ATGTATCCTTTCTTTATAGGGATACAAACAGAGGAAAAGGAGTCCAGGAATGTGAAAGTGAGTACATATAAGACTAAACAGGAGGAAATGAGGAAACATGGCGATAACATTTATACGATATTTGAGTACACTAACGCAACTCCTATTAGGTGTCAGAACGATTTCGGTTACGCGTGTTGCTTTTGCAGCGAATTTTACACGCAACCTCACGAGCTCAAAAACCATACGATACTGTCCCACGATTATGAAATGAAAAACAGTTTTATGGAAGGCAAACGTGTTGGCGATTATTTGGTCAAACTTGACGTTACTGGTCTGCAATGTGATATATGCAGTTTGCGGCTAAATACATTGGAAGAAGCGATGTGCCATCTGAGAGATCACAAAAAGACTATCCATTTCGATATAAATAATCACATAATACCGTTCGACTTTGAAGGCGAAGAATTAAAATGTACATTCTGCAAGATGGTATTTAACAAGTTTAAGAAGCTTTTAGAGCATATGAACAGGCATTACAGGAATTGCGTCTGCGATATTTGCGGTGCTGGCTTCGTCAATAGGAGCACGTTCACCGTCCACTACCACGGACACCAGACCGGATGTTTCCCTTGTCAATACTGCCAAAAGGTGTTCGATACTAAACGAAAGCAGAAATCTCACGAACTAGCCGTACACGTCAAAGCGAAGAAGACTTACAAATGCGTTTACTGTAACGAGCATTTCAGCACGCATTGGAGCAAGGAGAGGCATATAGCGGGCAAACACGGCGTTAATCTCCGAGAGATTAAATGCCACGTGTGTGGGAAGACTTGTTTGACGGCTAACTCTTTGAGGATACATTTGAAGAGGGACCATTTGAAGGAGCGACGGTACGAATGTAGTGTGTGCGGCTATAAATTCTTCGGATCTCAGGAATTAAAAGATCACATGTTGAAACATACGGGTGTGAAGAAATACCAGTGTGATGTGTGCTCGAAGTGCTTTGGGAAGAAAACGACGCTACGCGAGCATATACGCATACATACGGACGATAGGCGGTTCAAATGCGAACTCTGTCCGCAAGCGTTTATACAAAAGTGCAGCCTCAAGAATCATTTGCGCTCCAAACATGATCCCGGGAAGGCAATAGCGAACAATGCGAAAAAAGGTGAAAGAAGCAAGCATATGGATAATATTACCACGTTGTTCGAACATACAAACGCAACACCGATACGGTCTCAAAGAGACGTTGGGTATGGATGTTGTTTCTGCAGGAAATTTTATAAAGAACCGTCCGAACTTAAGGATCATACGAGGAAATCTCATCAAGCAgatatatcaaacattatgcGAGGCAAATCAATAAACGACTACTTAGTCAAACTGGACATAACGGAGTTACAATGCAATATATGCAATATGAAAATTGATAATTTAGAAGACATGATGAGCCATCTCAAAGGACACAAGAAACCTATGCACCTAGATATTAACAACCACATTATGCCCTTCAATTTTGAAAGTGAGGAATTAAAATGCGCAATCTGTAAATTggaatttaataaattcaaaaagatGATCGAACACATGAACCGCCATTACAGAAATCGGGTCTGCGACGTTTGTGGAGCCGGATTCATCAATGAAAAATCATTCCAGATACACTTGCAAGGGCACAAGACGGGGGAATTCCCCTGCAAGTACTGCCACAAGGTGTACGATACGCTAGGCAAGAAAAAATCGCACGAATCAGCGGTTCACGTGCATTCACAGATGTTGAGCAAATGCGGGTACTGTAATAAGAAATTCAAGTCCCATAGGAACAAGGAGAAGCATATTTCTAGCGTTCACGGAGTTAAGTTGCGCGAGATCAAATGCCATATCTGCGGAAAGGTCTGTCTTACTATGAATGCGTTGCGCGTGCATACTAGAAGGGACCATCTGAAAGAACGGCCATACGAGTGTCATTTATGCGATTTTAAGTCCTATGGAAGTAATTGTTTGAAGAGTCATATGTTGAAGCACACTGGAATAAGGGAGTTTCAATGTGACATCTGCCTCAAGGCATATTCCAAGAAGAAAACTCTCCGTGAGCATATGCGTATACATGCAGACGACAGGCGGTTCAAATGTGAACACTGTGGGCTAACGTTTATACAGAAGTGTAGTTTGAACGGTCATATACGGTCGAAACACAAAGATTTGGCGTGTGTGAATGAttga
- Protein Sequence
- MYPFFIGIQTEEKESRNVKVSTYKTKQEEMRKHGDNIYTIFEYTNATPIRCQNDFGYACCFCSEFYTQPHELKNHTILSHDYEMKNSFMEGKRVGDYLVKLDVTGLQCDICSLRLNTLEEAMCHLRDHKKTIHFDINNHIIPFDFEGEELKCTFCKMVFNKFKKLLEHMNRHYRNCVCDICGAGFVNRSTFTVHYHGHQTGCFPCQYCQKVFDTKRKQKSHELAVHVKAKKTYKCVYCNEHFSTHWSKERHIAGKHGVNLREIKCHVCGKTCLTANSLRIHLKRDHLKERRYECSVCGYKFFGSQELKDHMLKHTGVKKYQCDVCSKCFGKKTTLREHIRIHTDDRRFKCELCPQAFIQKCSLKNHLRSKHDPGKAIANNAKKGERSKHMDNITTLFEHTNATPIRSQRDVGYGCCFCRKFYKEPSELKDHTRKSHQADISNIMRGKSINDYLVKLDITELQCNICNMKIDNLEDMMSHLKGHKKPMHLDINNHIMPFNFESEELKCAICKLEFNKFKKMIEHMNRHYRNRVCDVCGAGFINEKSFQIHLQGHKTGEFPCKYCHKVYDTLGKKKSHESAVHVHSQMLSKCGYCNKKFKSHRNKEKHISSVHGVKLREIKCHICGKVCLTMNALRVHTRRDHLKERPYECHLCDFKSYGSNCLKSHMLKHTGIREFQCDICLKAYSKKKTLREHMRIHADDRRFKCEHCGLTFIQKCSLNGHIRSKHKDLACVND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -