Mach026305.1
Basic Information
- Insect
- Morpho achilles
- Gene Symbol
- -
- Assembly
- GCA_947086495.1
- Location
- CAMTZB010000025.1:3508912-3515421[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.38 34 6.0 4.8 2 23 160 179 159 179 0.90 2 13 0.25 23 6.6 0.7 3 23 224 244 222 244 0.91 3 13 0.0034 0.31 12.5 3.9 3 20 253 270 252 272 0.94 4 13 9.4e-05 0.0085 17.4 1.7 2 23 305 326 304 326 0.97 5 13 0.00025 0.023 16.0 2.1 2 23 334 355 333 355 0.91 6 13 1.5e-06 0.00013 23.1 0.6 1 23 361 383 361 383 0.99 7 13 2.5e-06 0.00023 22.3 1.1 3 23 391 411 390 411 0.99 8 13 3.8e-07 3.4e-05 24.9 0.9 1 23 417 439 417 439 0.96 9 13 5.6e-06 0.00051 21.2 0.4 1 23 445 467 445 467 0.98 10 13 3.6e-06 0.00033 21.8 2.1 1 23 473 495 473 495 0.98 11 13 2.6e-05 0.0024 19.1 6.8 1 23 501 523 501 523 0.98 12 13 4.6e-07 4.2e-05 24.6 0.7 1 23 529 551 529 551 0.98 13 13 0.00094 0.085 14.2 1.4 1 23 557 579 557 579 0.97
Sequence Information
- Coding Sequence
- atggcTTCTGAAACGAGCGTTACTACATATGAAAATTGTTGTCGTACCTGCCTTAAAGAAGATACTTTAATGTTTGATCTCTTCACAGAAAGATTGGGATCATCAAATATAGCAGATATGCTTATAATCTGTACGAAATTAAACGTAAATAAAGATGATTCCCTTCCAAGGCAAATATGCAGATATTGCTATAACTGTCTTTTATCCTTCTCACTCTTTCGGAGTAAGGCGCAAAAAGCTGAAGACAAACTCAGGCACATAATGCTGAGTATTAATGGATTCAACCACCTTAATACTGAAGGTGATttctatgaaataaaaatagaaaataatgatAACGATAACTTATTTGAATCTCAGATCGAAGAAAAATATCCGAATTGTCTTttaagtgaaaataaaaattctgaATCTTACAATTCAAATGTGTTGCAGCCTAATGATTGTGTGGaagatgttaaaataaaaaaggaattaaATTGTGTTCAATGTAATAAAACGTTCAGCCAAAAACTCAAACATCACCAACAAAAACATTTCCATCTTGaccaaaatatatgtaaaatatgtaCAGACACAAATGACAATGAGAATAAGTCGTTTTCAGCGATAAACGGAAACCaggatataaatataattgttaattcaAATACTGAAGCAGATTTGTCATGTATTATTTGTTCTTCCAGATTCAAATCAATGAATTTGTTAACGGCACATTTAAGCAGGCACTTAGAGAAGGGCCAAGTGGTATTCTGTAAAGAGTGTGGTAAACAATTCAAAAAAGTTAAGCACCTAAAGCATCACAAAGCGAGTCAAGAATGTTCAAGAATTCCGCTGATAACAAAATCAATCTTAAACGAGACTGTGAACACAAGTATATGTGAACCCAATCCATCAGATCAAGGACTTCAATGTAGTAAATGTTCGTTAAAATTCAAGAACGTCAATTCACTGTCAGCGCATATGAGGAAACATACAGAGAAAGGCAGAGTTATTTCATGTAgagtgtgcaataaagttttcaaAAAAATCAGTCATTTAAAAAGGCATGAAGTACAGCATGACGTGAATTGTTCATATAAATGTTCTTTATGTCCTAAATCCTTTGCAACTGAGGATATGTTGAAGGATCATTTGAACAAACATAAAGGTGTTAAGCCGCACGGTTGTCCAGTTTGTGGGAAGAAATTCTCACATTTGTCAACGTTAACTACACATGTTAAGATACATACACGAGATAAGGCATATTTATGTCCGACGTGCGGTAAAAAGTTTGACTCTAGTACGAATTTGAATCAACATATGCTTAGACACATCGGATTAAAGAAATATGCTTGTACCTTATGTCCTAAAAGATTTGTTAGTAAAGGTGAACTAAAATCGCACACAATCACACACACAGGTGAACGTTCCTATACATGTGACCAATGTGGGGCCACATTCACAAAGCGCAGTTCGCTGACCAAGCATAAATTGAGGCACTTGGGCCTCAAACCGCATCAGTGTGACACATGCTCTATGAGGTTCACATCTAAGGATCACTTAAAGCGACACTATAGAATACATACTGGAGAAAAACCATACAAGTGTGACATGTGCGACAGGGCGTTCACGCAGAGCAATGATCTGATTAAGCATCGAAGAGCTCATGTAGGGGACAAAGTGTATAAatGTCTTCAGTGCGACGAGGGTTTCCGTCTTCATACAGAGTTGCGTCAACATATTTCAGAGCACTTTATTACCTCGCAAATGGAAGCAGCAAATATTTCAAATGTACCAAAAGATGGCGTTAGTAGCAAAGGTTCAATTGCTAATCTGTTGCACCTACAAAGTGTTGGGACAGATGGGCAGAGTACAGACTAA
- Protein Sequence
- MASETSVTTYENCCRTCLKEDTLMFDLFTERLGSSNIADMLIICTKLNVNKDDSLPRQICRYCYNCLLSFSLFRSKAQKAEDKLRHIMLSINGFNHLNTEGDFYEIKIENNDNDNLFESQIEEKYPNCLLSENKNSESYNSNVLQPNDCVEDVKIKKELNCVQCNKTFSQKLKHHQQKHFHLDQNICKICTDTNDNENKSFSAINGNQDINIIVNSNTEADLSCIICSSRFKSMNLLTAHLSRHLEKGQVVFCKECGKQFKKVKHLKHHKASQECSRIPLITKSILNETVNTSICEPNPSDQGLQCSKCSLKFKNVNSLSAHMRKHTEKGRVISCRVCNKVFKKISHLKRHEVQHDVNCSYKCSLCPKSFATEDMLKDHLNKHKGVKPHGCPVCGKKFSHLSTLTTHVKIHTRDKAYLCPTCGKKFDSSTNLNQHMLRHIGLKKYACTLCPKRFVSKGELKSHTITHTGERSYTCDQCGATFTKRSSLTKHKLRHLGLKPHQCDTCSMRFTSKDHLKRHYRIHTGEKPYKCDMCDRAFTQSNDLIKHRRAHVGDKVYKCLQCDEGFRLHTELRQHISEHFITSQMEAANISNVPKDGVSSKGSIANLLHLQSVGTDGQSTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01018762;
- 90% Identity
- -
- 80% Identity
- -