Mach030284.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Morpho achilles
Gene Symbol
-
Assembly
GCA_947086495.1
Location
CAMTZB010000031.1:2361764-2367091[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.036 3.2 9.3 1.2 1 23 64 87 64 87 0.96
2 26 1.6 1.5e+02 4.0 0.8 2 23 115 137 114 137 0.94
3 26 0.013 1.1 10.7 0.8 2 23 160 181 159 181 0.97
4 26 0.2 18 6.9 0.3 1 23 185 207 185 207 0.97
5 26 0.00016 0.015 16.6 1.7 1 23 212 235 212 235 0.98
6 26 0.049 4.4 8.8 3.5 1 23 242 265 242 265 0.97
7 26 0.00077 0.069 14.5 2.4 2 23 273 295 273 295 0.94
8 26 0.0012 0.11 13.8 1.2 1 23 301 323 301 323 0.98
9 26 0.13 11 7.5 1.7 1 23 329 351 329 351 0.98
10 26 0.0073 0.66 11.4 6.4 1 23 563 585 563 585 0.98
11 26 6.1e-06 0.00055 21.1 0.1 1 23 589 611 589 611 0.98
12 26 0.0012 0.11 13.9 0.9 1 23 616 639 616 639 0.97
13 26 0.25 22 6.6 0.2 2 23 647 669 647 669 0.91
14 26 1.5e-06 0.00013 23.1 4.0 1 23 676 699 676 699 0.98
15 26 0.0009 0.082 14.3 3.4 1 23 705 727 705 727 0.97
16 26 5.7e-08 5.2e-06 27.5 2.6 1 23 733 755 733 755 0.98
17 26 0.012 1 10.8 0.4 1 23 860 883 860 883 0.91
18 26 0.00057 0.052 14.9 0.4 2 23 910 932 909 932 0.97
19 26 0.1 9.1 7.8 3.3 2 23 955 976 954 976 0.97
20 26 0.088 7.9 8.0 1.4 1 23 980 1002 980 1002 0.91
21 26 0.0035 0.31 12.4 2.5 1 23 1007 1030 1007 1030 0.98
22 26 0.22 20 6.7 0.6 2 23 1038 1060 1037 1060 0.96
23 26 0.00012 0.011 17.1 5.5 2 23 1068 1089 1067 1090 0.95
24 26 0.00034 0.031 15.6 0.6 1 23 1096 1118 1096 1118 0.98
25 26 7.9e-05 0.0072 17.6 3.3 1 23 1124 1146 1124 1146 0.99
26 26 0.00011 0.0097 17.2 1.8 1 23 1152 1175 1152 1175 0.95

Sequence Information

Coding Sequence
ATGTCTAATGAAAATAATACTTCTATTGTAAAGATACCTGTTGTGAAAAAATTGAATTGCAAAACCAGCAAATCTAAAAAGGCTAAAACTTCAGCCCCAATTCAAGAACATCAAAAACATAGCAACAATTTTGAAGTTGTTTTGGAAAATTCTAATGCGACACCGATACGCAGTCATAACGGAGTTGGTTACACTTGTTGCTTTTGCTCAGAGCAATATGGGAATCCAGCTGAACTAAAAAGTCACACATTAATCACACATAACAACGGTTATGACAGGCGCGACTTCATGAAGAAACAAACCTCAAGTGCTTATTTACTTAAACTTGATATTACTCTATTGCATTGTAAATTATGTGATGAACGCATTGAAACACTTGAACGCTTGTTTGATCACTTGCAAAACGAGCATAAGAAGCTGATCTATACAGATGTAAAAAATCAGATAGTTCCCTTTAAATTTGAAAGTGAAGAACTTAAGTGCGCTATATGTCCCCTCGAGTTTAACAGATTCAAAGTTCTTTTAGAACATATGCATACACATTATAGGAATTACGTCTGCGAGGTTTGTGATGCAGGATGTATCAATAGAAGAGTACTGCTGACTCACAAAGGGACGCATAAGATAGGCTCTTTTGAATGTAGTAAATGCAACAAAGTTTTCGCCACTCAACAGAGAAGAACAACGCACATGAATACGGTTCATAAGTATATGAACAAGGCACATAAATGCGGAGTTTGTAACGAGAGATTTAAAAGCAGCCAAATGAAGGATCAGCATATGACGACGAAGCATGGGATGTCGCCAATAATCCGGAGGTGTCTTGCTTGCGACAAAACATTTACAAGTCAAAATTCGCTAAGGTTGCACAGGAAGAAGTATCATTTGATGGAGCGGCAGTATCAATGCAATGAATGCGAAATGAGCTTCTTCACTGGAGCACAGTTAAAGTATCACACGTTGAAGCATACAGGAAAAAAGGAGTTTCAATGTGATGTTTGCATGAAATGGTTCGGGAGGAAGTGCGTTTTGCGCGAGCACATGCGTATCCATACGAATGATAGGCGGTTCAAATGCGCGCAATGCGGCCGTGGGGAAGATGAACTAACATTTGGAATACAGCCACAGACAATACAAAAGGAGGTTCAAAAAATTCAACAGTGCATTTTGTTTATAGGTCCCCATCAGCAAATAACCATCGCAACCGGAGCCAAAGCGGACGAAATTCTTCACAATATTCAAGAATCAAGTGAAAAACCTGTCAAAGTACAAAGGGGTACTAATAAAAGGAATCTTAAGAAGAGTCTAGATGAGACATGTGTCCAAGAAGTCGAGAAGCATCGCAAAAACTTGCTAGAGATATTGGTAAACTCTAACGCTACACCGATACGGTATCGTGGTGATCTTGGATACTCGTGCTGCTTCTGTAATGACCAATATCTAGAAGCAGCTGACCTCAAGAAGCACACGCTAAAAGAACACGATGTTGATGCCTTGAAATTAGTTATTCAAGACATGAAAATTTATACAGTTAAATTAGATGTAACAGCATTGAAATGTACTATTTGTTGCATTAATATATCTACACTAGAACTACTGGTGGAACATTTGATTAAAACTCACAAACGGACTATTTATACGGATATCAAAAATCATATGATACCTTTCAAATTTGAAGATAATGACCATAAATGTGCAATGTGCTCCACTAAATGCTCGACGTTTAGAAATTTAACCGAACATATGAACACGcattatagaaattatatttgcaAAGACTGTGGCGCCGGATTCATTAATCGTGACTTATTGAGGAGCCATTTAAGGATACATAAGACGGGGACCTTCACATGTAATTTCTGTTCGAAAATTTTTAATACGCGTGTCAAAATGCTGTCGCATATAAACGTCGTACACAAACATCTGTTCATGACGAGAAAATGCGGGTACTGCAGTGAAATGTTTGTAAATGAATACAAGAAGAACGAACATTTGGCCGAAGTACACGGCGCTAAGATGCAAGAGTTTAAATGTGAAATATGTGACAAGATATTTAACACCCACACCAATTTGAGAAGGCACACAAGGAAAGACCACTTGATGGAAAGGAACTTTGAATGTGATATGTGTCATATGAGATTCTTTGGCCGCAAAAATTTGCGCAATCATATGGTGAGACATACCGGCCAGCGTGATTTTCACTGTGATATATGCGGGAAGGCGTTTACAAGAAAATACACACTTAATCAACACATGAGAGTACATGTCAAAGAACAGCGAAGGGCTAGCAGTGACTCGAAGGATAAATATTTGATTGTAATGGAGTCGGATGTAGAGGCTGgtAAACACTCCCATACTGAATATAAAGAAGATGAAAGGGAAATTAAAGTCTCTGAAATGCGACTACGTAGTAACGATACTGAAAATTATAATGTAGATACTAAGAAAGAGAGAATCAAATCCGAcaaaaagattaaattaaaaccGATCAAAGAACTGTCTAAGcatcataataatataaaagagatACTTCAATGGTCCAATGCAACACCTATACATGGTCGAAGTGATATAGGTTACTTGTGTTGTTATTGCAAAGAACAATATGCAGACCCTGCTGATTTAAAGGCGCACACGTTAGCAAACCACGAAAACAATACAAATGCTACATTTCTCCGGAAAAGagacttaaaaaaatatcacgTTAAAGTCGACATTACAggattaaaatgtaaaatatgcaATCAGAGTATAGAAAATTTGGACCAGTTGATAAATCATTTGAAAActaatcataataaaaaaatatatacagataTCAAGAATCATATCGTGCCCTTTAAATTTGATAGTAATGAGTTAAAATGCTTTGTATGTTCGACCGTGTACACCAAATTCAAAATGCTTTTAGAGCATATGCATAAGCATTGCAGGAATTTCATATGCACTCAATGCGGCAATGGATTTTTCAATCGACGATCATTGCTCAACCACGATAAGCGTCATAAGTTGGGAGAGTTCAAATGCGAACATTGCGAAAAAGTGTTTGATaacatacaaaagaaaaattcTCATGTTCGCACAGTGCACGTGCATGGTTACCTATTGAACAAATGTGGTTATTGCAATCAAAAGTTCCCAGGATACAGAACAAAGGCGGAACACTTGAAGACTGTACATGGTATTGGCTTAGAACCGGTTAAATGTCAAGCTTGTGAAAAGAGTTTTTGTAACAGTGACTCTTTAAGGAAACACATAAAGCGGCATCATCTAATGGAGGGCCGATACAGCTGCTCCGAGTGCGATATGAAGTTCTATGGTAATAAAGATTTAATGGAACACATGGTGAAACATACGAAGACTCGTTGCTTCCAGTGCAAAGTTTGCTTGAAACGGTATGGGAGGCAGCACACGTTGCGCGAGCATATGCGGATTCACGATAACGATCGCCGTTTCAAGTGCGACAATTGCGGAATGGCTTTCGTGCAAAAGTGCAGTTGGCGGCGCCATATGCTCGCTAAACATGGAGAGCAAACATAG
Protein Sequence
MSNENNTSIVKIPVVKKLNCKTSKSKKAKTSAPIQEHQKHSNNFEVVLENSNATPIRSHNGVGYTCCFCSEQYGNPAELKSHTLITHNNGYDRRDFMKKQTSSAYLLKLDITLLHCKLCDERIETLERLFDHLQNEHKKLIYTDVKNQIVPFKFESEELKCAICPLEFNRFKVLLEHMHTHYRNYVCEVCDAGCINRRVLLTHKGTHKIGSFECSKCNKVFATQQRRTTHMNTVHKYMNKAHKCGVCNERFKSSQMKDQHMTTKHGMSPIIRRCLACDKTFTSQNSLRLHRKKYHLMERQYQCNECEMSFFTGAQLKYHTLKHTGKKEFQCDVCMKWFGRKCVLREHMRIHTNDRRFKCAQCGRGEDELTFGIQPQTIQKEVQKIQQCILFIGPHQQITIATGAKADEILHNIQESSEKPVKVQRGTNKRNLKKSLDETCVQEVEKHRKNLLEILVNSNATPIRYRGDLGYSCCFCNDQYLEAADLKKHTLKEHDVDALKLVIQDMKIYTVKLDVTALKCTICCINISTLELLVEHLIKTHKRTIYTDIKNHMIPFKFEDNDHKCAMCSTKCSTFRNLTEHMNTHYRNYICKDCGAGFINRDLLRSHLRIHKTGTFTCNFCSKIFNTRVKMLSHINVVHKHLFMTRKCGYCSEMFVNEYKKNEHLAEVHGAKMQEFKCEICDKIFNTHTNLRRHTRKDHLMERNFECDMCHMRFFGRKNLRNHMVRHTGQRDFHCDICGKAFTRKYTLNQHMRVHVKEQRRASSDSKDKYLIVMESDVEAGKHSHTEYKEDEREIKVSEMRLRSNDTENYNVDTKKERIKSDKKIKLKPIKELSKHHNNIKEILQWSNATPIHGRSDIGYLCCYCKEQYADPADLKAHTLANHENNTNATFLRKRDLKKYHVKVDITGLKCKICNQSIENLDQLINHLKTNHNKKIYTDIKNHIVPFKFDSNELKCFVCSTVYTKFKMLLEHMHKHCRNFICTQCGNGFFNRRSLLNHDKRHKLGEFKCEHCEKVFDNIQKKNSHVRTVHVHGYLLNKCGYCNQKFPGYRTKAEHLKTVHGIGLEPVKCQACEKSFCNSDSLRKHIKRHHLMEGRYSCSECDMKFYGNKDLMEHMVKHTKTRCFQCKVCLKRYGRQHTLREHMRIHDNDRRFKCDNCGMAFVQKCSWRRHMLAKHGEQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-