Mlae032026.1
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- -
- Assembly
- GCA_947458855.1
- Location
- OX375846.1:3073093-3082139[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 3.6 3.1e+02 3.2 0.2 3 23 257 278 256 278 0.88 2 16 0.0065 0.56 11.8 0.3 2 23 304 326 303 326 0.96 3 16 0.0036 0.31 12.7 1.5 2 23 349 370 348 370 0.96 4 16 5.8e-05 0.005 18.3 0.5 1 23 374 397 374 397 0.96 5 16 0.96 83 5.0 1.9 3 22 405 424 404 424 0.92 6 16 0.12 11 7.8 0.5 1 23 431 454 431 454 0.90 7 16 0.84 73 5.2 0.4 1 23 499 522 499 522 0.90 8 16 0.005 0.43 12.2 0.4 2 23 548 570 547 570 0.94 9 16 1.4 1.2e+02 4.5 0.6 2 23 592 613 591 613 0.95 10 16 0.084 7.3 8.3 1.0 2 21 618 637 617 640 0.93 11 16 9.7 8.4e+02 1.9 1.0 1 22 645 666 645 666 0.90 12 16 0.096 8.4 8.2 1.3 1 23 673 696 673 696 0.97 13 16 0.21 18 7.1 4.2 1 23 703 725 703 726 0.95 14 16 0.0025 0.22 13.1 0.8 1 23 731 753 731 753 0.97 15 16 5.5e-07 4.8e-05 24.7 1.8 1 23 759 781 759 781 0.97 16 16 0.00013 0.011 17.2 2.5 1 23 787 809 787 809 0.98
Sequence Information
- Coding Sequence
- ATGGAATCTAAGAATATAGTGTGGAGGCCGAGTCCTACGGTTTGCCGATGTTGTTTCAACGACGGTTGCTATAAAGATATTTCTACTGAATATTTTTGGATGGGAAAGAGAGAAATTTATTCAGAAATGTTGACCGATACGTTAGATGTGTCTATTTCATACTCTCAATCTGGAGGTCCAAACAGTAACAGTCGTCTTATCTGTGAACCGTGCATTGCTCGTCTACGAGATGCCTCGGATTTCAAGAAACAGGTCCTCGAGTGTGAGAAGATGTTCCTGCTGCAACTGAACCCAGATAATGACTCTGTTCCATCAGAAGTAGAACTGGAAACAAATGAATCTCAAATGAAGACTGAAGAAGTGAAGATAGAAAAGTTGACGAGTGTAGAAGATTTTCCAGACAGTGTGGACTTTGGCGGCACTCAAGGGGAAGATAATGTTGATGATGATGATGACCTTGACGACGAACCGCTCACCAAGCTGGCCAGTAAGATACCGAAAAAAGAAAAAGTAGATTTAATGGACTTAGTAGATAACGTAAAAGCGACTGAAAAGCGAAAATCTTCAAGCAAAGCAAAGTCAAGTCCGGCCAAGAAAGCAAAGACGAAGAGCAAAACTGAGGCTGCTCAGCCATCGTCTAGTGGATCTAAAGTGGTCCCTAAAAAGCAAAAAGCGGATCCCTCCGTCGATCCAGTTCGCAGAAACGCAGAATTAATCCTTAAATATACCACTGCGCATCCGTTCAGGGTCCACGTAAAGAATATATTGTGCGTTTACTGTTTAGATGAATTTGAAGATCCAAAACTTTTCAAACAACATATGTATGACGAACATGAAACATTTAACATTCCAATGGTATTTGTTAAACTACAAAAAACTGAATACGTTAAAGTTGATTTTACTAACTTAACATGCAGGATATGTTCTCAGGAATATAATGATTTGGATAATGTTACCAAACATCTGACTACCGTTCATAAAAAAGCGTTGAATCTTAACGTGCCGTTGGGCGTAATGCCCTATCTGTTAAAGAAAGATACGTGGAGTTGTGCTATTTGCTCCAAATACTTTCCATCACTGTTGCACCTCAATAAACACACCACTACTCATTTTTCGAGCCACGTCTGTGATGTTTGCGGCAAAAGTTATGTCTCGAGCACTGGATTGCTTCAGCATGTGAGGAACACGCATCAACGGGATTCGAAGCCTTTTTGCAGAAGATGCAAAACTACTTTTTCTTCGAATGAAGCGAAGAAATCTCACGAAAAAACGGATAAAAGCTGCATGCCGTACTGCTGCTCCGAATGCCCCGACAGGTTTCCCAACTGGGAGTTGAAGCAGAGGCATTTGGTGGAAGTGCACGGTTGTACAAAAGCTTTGTATCCGTGTACCAAATTGGAAAACGATGACGATGGAGTGAAAGCGTCAAGAGAAAACTGCAAAACTATACTCCTGCATTCTACAGCCTACCCTTTCCGGATCAAATCCTGCAAATTTCGTTGTCTATATTGTTACGAAAACATCGAAGATCCCGACGAATTCCGAAACCATTTTGACCAAGAACATAAAACGTTTAATGTTTCTATCGCCATGGCACTTCTCCACTCCAGTATCTACATCCGGATCGATGTAACCAATCTCAAATGCAGGATATGCGATGAACCTTTTGAGAAGTTTGACAATTTTGTCCAACATTTGAATGGCAAACACGGCCTTCTCGATTTAAAAGCCGACCTGAAAGTAGTACCTTATCGTCTAGAAAAAGAAAAGTGGAATTGTGAAATTTGTAGTAAAAAACAAAGAGGGTTAATGCAGCTGATGACACATACAAACTCGCACTTTCTTCGATTAATTTGCGATAATTGCGGTCAAAGGTTTCTGAGCGCAGCAGGTTTGAATAAGCATATAAAGTGTAAACACGCGGCGCACCCGCACGTCTGCCGCGCTTGTTTCAAGGGGTTCGACACTTACGAGGCGAAGCATGCTCACGTTCGGAAAGTCAAAGCATGCCATCCGTTCTCGTGCAACAAGTGCAACGATAGATTTATGTATTACGAAGCTCGGCAGCGGCACATGGCCACGGAGCACGGCGAGCCCATGAAAGTGTACAACTGTAACGAGTGCGAGAACGTGTACCACTCGAGGACGCTGCTGTACCTGCACTATAAGGTGCACCACAGCAATGAGCACTTCTCGTGCCAGACTTGTAGCCTCAAGTTGGCGACTAGAAGCGAGTTGAATAAGCACACTTTGGTTCATTCGGGTATAAGAGAGTTTGATTGTGACATATGCGGAAAGAGTTTTACCAGAAAGACTAGTTTGACTTCCCATTATAAGCTCCATGCTGCGGTGAAGCCTTACGTCTGTCCTATTTGTCAGAAAGGTTTTGTTAATTGCGCTAAGTTCAAGCATCATGTTCAAATTCACTGTTTGGATACTATGGATTAG
- Protein Sequence
- MESKNIVWRPSPTVCRCCFNDGCYKDISTEYFWMGKREIYSEMLTDTLDVSISYSQSGGPNSNSRLICEPCIARLRDASDFKKQVLECEKMFLLQLNPDNDSVPSEVELETNESQMKTEEVKIEKLTSVEDFPDSVDFGGTQGEDNVDDDDDLDDEPLTKLASKIPKKEKVDLMDLVDNVKATEKRKSSSKAKSSPAKKAKTKSKTEAAQPSSSGSKVVPKKQKADPSVDPVRRNAELILKYTTAHPFRVHVKNILCVYCLDEFEDPKLFKQHMYDEHETFNIPMVFVKLQKTEYVKVDFTNLTCRICSQEYNDLDNVTKHLTTVHKKALNLNVPLGVMPYLLKKDTWSCAICSKYFPSLLHLNKHTTTHFSSHVCDVCGKSYVSSTGLLQHVRNTHQRDSKPFCRRCKTTFSSNEAKKSHEKTDKSCMPYCCSECPDRFPNWELKQRHLVEVHGCTKALYPCTKLENDDDGVKASRENCKTILLHSTAYPFRIKSCKFRCLYCYENIEDPDEFRNHFDQEHKTFNVSIAMALLHSSIYIRIDVTNLKCRICDEPFEKFDNFVQHLNGKHGLLDLKADLKVVPYRLEKEKWNCEICSKKQRGLMQLMTHTNSHFLRLICDNCGQRFLSAAGLNKHIKCKHAAHPHVCRACFKGFDTYEAKHAHVRKVKACHPFSCNKCNDRFMYYEARQRHMATEHGEPMKVYNCNECENVYHSRTLLYLHYKVHHSNEHFSCQTCSLKLATRSELNKHTLVHSGIREFDCDICGKSFTRKTSLTSHYKLHAAVKPYVCPICQKGFVNCAKFKHHVQIHCLDTMD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -