Mlae009147.1
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- ZFY
- Assembly
- GCA_947458855.1
- Location
- OX375857.1:8108032-8119670[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.4e-05 0.0013 20.2 1.6 3 22 86 105 84 105 0.94 2 12 0.003 0.26 12.9 2.0 1 23 132 155 132 155 0.96 3 12 1.5 1.3e+02 4.5 1.3 2 23 163 185 162 185 0.94 4 12 0.00077 0.067 14.8 0.3 1 20 190 209 190 211 0.95 5 12 2.2e-06 0.00019 22.8 1.1 1 23 223 246 223 246 0.97 6 12 0.088 7.6 8.3 2.1 1 23 253 276 253 276 0.97 7 12 0.55 47 5.8 0.1 1 23 281 303 281 303 0.97 8 12 9.4 8.2e+02 1.9 2.4 1 23 308 330 308 330 0.95 9 12 0.0012 0.1 14.2 0.3 2 23 337 358 336 358 0.97 10 12 5.7e-06 0.0005 21.5 0.4 2 23 361 382 361 382 0.98 11 12 6.4 5.5e+02 2.4 0.0 8 23 400 415 389 415 0.87 12 12 0.00044 0.038 15.5 4.1 1 23 422 444 422 444 0.98
Sequence Information
- Coding Sequence
- ATGGCTTCGAGAACAACTCGAAGTTCTACTAAAAAAACATTTATAAAGTATGAAGACGAAGATGATGAAGATTCCAATGATTTGTCACTTAGCGAATTTAAAATCCAAGAAGATTTAGACAAGACTGGGGAAGATTCAAACATAAGTAATGATTCAGATACTGTAGTGGTTTGTACAATTATCGAAGATGATGAGGATATGAAATTAATATCTGAAATTGCTGTTAGGGACAATAAAGAGCCATCTACAATAATTTGTAAATTCTGTCCAAAAACTTTTAAATCTTCTTCTCAAATGAGAAAACACCAACGAAAATGTTTGATAAATGTTAAAAAAGGTGGCATCATCATCCCGGCCAAGATGGCACAACTTGCTAGAGTCAATAAACCTAATTATTCTTGCAAATTATGCAGGAAAAATTTCAAATTTGAAGGATCTTACAGTAGTCATATGCTCAATGAACATTCATCATTGCCGCAAAGCATTTCTTGTAAGTTGTGCATAGCTTGCTGCCCAGATAAGGAAACTCTCATGATGCATATTGAAAAAGTGCATAACGCTCCAGTGTATGAATGCCCATTGTGCAAGGCTACATTTTCACGTGGATATCATGTCACTAGACATATTGAACAAAAGGGATGTAATGGAATGACCAAAGTTAAGAAATTTAGTTGCAAGATATGTGGGGCCCAGTTTTCAAGAAAAGATAACTTGATGTATCATCTCCGAAACAACCATATGGCCAGTACCAAGAAGTTTCAATGCAAACTCTGTGATTATGGAGTCCAGAACTTTAACACACTAGTTAGACATTTCAAAAGATATCATATGGAAAATGTCTTCATTTGTGACATCTGTAATTCTCGACTTGGTTCCCGAATGGCTGTAGCAAAGCATCTGGAGACACACGGAGATAAAAAATACTGCTGTGGTGTTTGCAAATACATGTCTCACACCATAGAAGTGATGAAGCGTCATGTGCTGATCCACACCAAGGAGAAGCCTATCAAGTGCTCCGAGTGTGATTCCTCCTTCATCCAAGTGCTGCAGCTGAGAGCCCATCAGCTCAAACACAAGCGCACCTGCGCGATCTGCGACGAAGAGTTTAAAAATCGCCAACAATTGCTGATACATATGAGAACCCACATGGGCAAAGATAAGCTGGTGTGTCCGATAAATTCCTGCAGCATGCCCCGGAGAGAGTTTGTGGACGAGGAAGCTCTGGACCAACATTTGAAAATGCATGACAAAAAAAATCAAATATTCAAATGCGAAATCTGCAACAAGACGTACCACAAGGAGGTATACTTACGTCGGCACGAGCGTCAGCACGCGCTGGAGCGTCCGCGTCGCTGCATGTACTGCGTGTCGGCGCGCGCGTACGGCCGCGGGGACCGTCTGCTGCGACACCTGCGGCTGCAGCACCCGTCCGTGTTCGCGCAACACCTGGCCAGCGTCAAGCAGATGCCAGTGGAGGATGAAGAAATGCCAAACTACAAGCTTACCAAGCAAGAGACAGACGAGATCCTCTCAATACTGGATTCTATACAGGACCAAGCGTTGCAGCAGAATGGAGGCATGCCGTATGCTGGCATGGGAGGCTCTAGCGACGAAGTGATTACTCCTGATGTCAAGATCAAGAGCCAGGCGAGTTCAAGTCCAGTGATGAGCGAGCAGGAGTTGGGAGAGAGCGTGCGCGCGCTGCTCGCCCAGCTCATCGACGCGCCCACCCTGCGCGCGCTCGGCGCCGGCGACGACGACGTGGATCTGGTCCTACAGCGCGTGATAGAGCATTGTGGCGCAGAAGCAGCCCAGGGGAGCGAATGGGCGCGCGTGCAGAGAGTGCGGGAGAATCTCAAGCTGCTGTTTGTGCGGGTTTTGGATGATGACGATGTGCGCAAGATGCTGGACAGACACACCGTGGACCAGGTCGTCAGGCACATGCTCGCTGTACACAAACAGGAAGATGACTACTGA
- Protein Sequence
- MASRTTRSSTKKTFIKYEDEDDEDSNDLSLSEFKIQEDLDKTGEDSNISNDSDTVVVCTIIEDDEDMKLISEIAVRDNKEPSTIICKFCPKTFKSSSQMRKHQRKCLINVKKGGIIIPAKMAQLARVNKPNYSCKLCRKNFKFEGSYSSHMLNEHSSLPQSISCKLCIACCPDKETLMMHIEKVHNAPVYECPLCKATFSRGYHVTRHIEQKGCNGMTKVKKFSCKICGAQFSRKDNLMYHLRNNHMASTKKFQCKLCDYGVQNFNTLVRHFKRYHMENVFICDICNSRLGSRMAVAKHLETHGDKKYCCGVCKYMSHTIEVMKRHVLIHTKEKPIKCSECDSSFIQVLQLRAHQLKHKRTCAICDEEFKNRQQLLIHMRTHMGKDKLVCPINSCSMPRREFVDEEALDQHLKMHDKKNQIFKCEICNKTYHKEVYLRRHERQHALERPRRCMYCVSARAYGRGDRLLRHLRLQHPSVFAQHLASVKQMPVEDEEMPNYKLTKQETDEILSILDSIQDQALQQNGGMPYAGMGGSSDEVITPDVKIKSQASSSPVMSEQELGESVRALLAQLIDAPTLRALGAGDDDVDLVLQRVIEHCGAEAAQGSEWARVQRVRENLKLLFVRVLDDDDVRKMLDRHTVDQVVRHMLAVHKQEDDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -