Mlae030177.1
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- -
- Assembly
- GCA_947458855.1
- Location
- OX375843.1:6678887-6694788[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.012 1 11.0 0.3 1 23 504 527 504 527 0.97 2 15 0.39 34 6.2 0.8 2 20 707 725 706 727 0.93 3 15 0.075 6.5 8.5 1.9 2 21 769 788 768 789 0.91 4 15 0.11 9.5 8.0 1.8 1 23 802 827 802 827 0.92 5 15 0.00045 0.039 15.5 0.2 2 23 834 857 833 857 0.95 6 15 0.0016 0.13 13.8 0.3 1 23 863 885 863 885 0.95 7 15 0.0022 0.19 13.3 3.1 1 23 891 913 891 913 0.98 8 15 1.5 1.3e+02 4.4 0.1 1 19 923 941 923 943 0.90 9 15 0.0018 0.15 13.6 0.5 1 23 1018 1040 1018 1040 0.96 10 15 3.1 2.7e+02 3.4 7.2 1 23 1047 1069 1047 1069 0.95 11 15 0.0021 0.18 13.4 1.8 1 23 1107 1130 1107 1130 0.95 12 15 0.21 18 7.1 4.4 1 23 1137 1160 1137 1160 0.96 13 15 0.015 1.3 10.7 0.1 2 23 1177 1199 1176 1199 0.95 14 15 0.0075 0.65 11.7 2.1 1 23 1235 1257 1235 1257 0.97 15 15 5.3e-06 0.00046 21.6 1.0 1 23 1263 1285 1263 1285 0.97
Sequence Information
- Coding Sequence
- ATGGATGAAAAATCCCTAACTCCGCTAATTCTGTGTATGGAAAATGCTAATGGTGAGGATGTTGCTTTGAAAATAGAACCCACTGACAACTTTAAAACTTTTCTTGATATAGCGAAAACTCTTCTTGGATTTGAAGTGGATATTAACTCAATTACTCGCAATGAAACAGTTAGTTTAACAGATAATATTTATGAATTTCTAATGAACGCTGAGAAGAATGACCCTTTAAATATAAGCACTGAACTAAACCTTGATATACTTGAAGAAAATGCAAGTAGTGACTTTGTTTATATGCTAGATGATGGGACTCAAATAAATGCTTCACAAATACAATTTGATAATGACGAACCAGAAGAAAAGTTTAATGTCAATGAGTTACCTTTCATTAAAAGAATTGATACCACGGAAGCCGTCGACGATAATAAAATTAATGACGCCACAGAGATAAGAACACATAACATAGAAAGTCCTTTGCGAAAATGTAAACATGTCAATCCTAAGAAAAGTTTTGCAAGTACGTTACCTTTTAGAGTATTGCCCAATAAAGCAAAAAATTTTGAGGCTCAAGTAAATACATTTTTAGCAAAAAGGCCTACGTATTTTTTTAATAATATTCCTGCAACGAAGCTTAGCAGCCCCATTGCAAATATTAACAGAGACAATAATCAAATAAAAAGTGTACAAGATATTACTTATACCAGAGAACAAGTTTTAGATTTGGTTAAAGATTCACCACTAGCTGCTAATATTGAAAACATGAATAATTCAAATAATGAAATTCGTCGCCATGCAAGAAAAACCGATCCTTGCAAACCTGTACCCAAGAAAATAGAAAGCACACAACCAGCAATCAACGAAACGCCTAAGAAAACTAAAAATAATACTCAAATGTGTTTCGTATGTGAAAAATATTTAGATCGAGTAAAAGATAAACTATATATATTTGATAAAGAAGATCAAAAACTTCATCGTTCTTTGCGGCAAACCAAGCAATCAGAGGACCTAAAAGTTCTTTGTGATAAATGCTTAAAAGAACATTTTCGACCAGGTGTTGTAAAGGATCCTGAATTAACTTTAGAAGATAACGAATTCTTAGTAATAAGGAATAATCAGCAGTTTGTATTTCATCGCAATATAATGGATAACAATAAATCTCCTAAATTGGAAAAAATTGAAAGTGAAAACACAAAGGTGCTTGATGATGATGAAGAAGTGAAATTTGTTAAAATGATTGCAGAAACTGATAATGAAATAATAAACAATGATAATATTAACGTTAACAATAATGTAGTTGTAATAAAAGAAGAATATCAATCAGAGCCAGAAGAAACAAATATAAACAATTTAGATGCAGTTAATGAAAACTTAGAAGATTTTTTAGGGAAATACCAAGAAATAGATTTAGCTGAAGCAAAGTGCAGATTCTGTTATATAAATTTTCCGGATATAAATTGCATCATTGAACATGGATTAGAACATAAACATGATATTGTAGAGGACGGTCAAATATTTCCTTGCCCTTTATGTGATTATGGCTATGCTACCCATAAATGGTTAAAATTTCATATAAGAATAGCACACGATGAAAACTTTAATAAAGATAATTGCAACAACGTAAAACAATTATTTGAAAAAGAAAAAAATAACGAAAATTCAGAAGGTTATCTTAAATCTACCGAAAACGGCGGGTCCCAAAGTAAAGCTGTTGAAACGGATGAAAATTCTGTAGATAATGTAAATAAAGATTCATTAGAAGCTCTCATTTCATCTCCGATTGCTAAACGGACTCGGAGTTCTATTACTAAAAAAAAGGAAAGTTGTGATAAAGAAAGCTCTGATAAACCTGAAGACATAAAGCCTGTAGAAGAAAATCATGAAATGAATATCAAAACTACATTAGAAGTAGATCCCTCCAAGGATATTTTTTCTGCTAATGACATAAAATTGGATGTACTCGTAAAATCAGAGCCTCAAGACAAAAGTGACAATGAAAGCATATGGATTCTTGAAGCTGAAGAATTGAGCGACAATGAATTATGCAATGATAATAGTTTGTGGTCTTTTGAGAATAAAATAAAATATAAAAAAGAAAAATCGAGTAAGGAGAAAACACATATGTCATGTCAACTTTGCAATCAAATACTAGTATCTAAGGATTCTTTGAAAACTCATAAATGTGCAAAGAAACGTGGACGAAAACGAAAAAATGTGAATAACGATGATGTTTACGTAGCTACTGAAGACGAGAAGGAAAAGGAAATTAAAAAGAAGACCAGAGATTATAAAAGAGAGTCGCAGGTCATGACTTGTCATAATTGTAATGAGTCCTTTACTTCTAAAGTCAGACTTAAATTTCATATGCAATTCTACGAAAACAAATGTTCGTCTCGCAATGAAGGTAGCTACAAGTGTTCAGATTGCAAACTAAACAAAGTGTTTAGTACAGAAAACGCTTTGTTCGACCACGTTCACTTTGATCATCCCAAACAGAAGCGTTGGCAATGCCCCGTCGAGGAATGTGGCAAGACTTTCTATTTACGCGCTACTCTCACAAAACACAGTCGTGGTCATACAGACACGCGACGGTATGTTTGTCCGTCTTGTGGGAAAAGATTCTTTGATAAACAAACATTGGATGAACACGGGGTTACGCATTTGAAGATAAAACCTTATCAATGTCACATATGTTTGAAGCAACTAACTCGCCGGTCCAGACTGCGCATGCACCTACGAGCTCATGAAGAAGAATTATCACCTGCTTTAGTGTATGTGTGTCGAGTGTGCGCGCGCGCATTCAAAGATCACACTGATGCCGAGGAACACGGAATTTGTTTTAGTAGTTGTGTAGATGTTATGACGATGCCAGCGACACACCTATGTCCTACCACAGGACTTCTTTCTGACCAACCTCAAAATATAAAACAATTGGAAGAAATATTTGCGAAACACAAAATTTACGAACCTCGTGACGAAGACAAAAAGAAATCAATGCTTAGTCAGTTATCAGATGCTGCTAAGGTAGTAATAAACGTTGTGGAAATAGAAAAGGCATTTCGCTGTGAATATTGTGAGGAAGTGTTCTTCTTGGAAGATAATTTAAACAACCATCGTGATTTGCACAAAAATGTAAAAAATCCATTTACCTGCCACATCTGTAAAGTCTCTTTTGCAACTTACTCTAGATGCACAACTCATAAAACCACCCACGGATTCTACAAGCGCCCTCTACCATTTAAAAACAAAACAGAAACTAATGACGTAGGAAGTGAATCTGCCAGCGGGATCCTGGGATACGGAGGGTTCCCTGTAGTTAAACATTTTTTGTGTGAGGATTGTGGACGTTCGTATCTTCACTGGACGTATCTACAAGTACATCGACGTATGAAGCATCCACGAAATAATATGATACACCAATGTTCTACGTGCCACCTTACATTTCCTAACAGTTGGAGTGTGTCGTATCACAAGAAGAAAGTGCACGGGGTTCAGATAGGAAAGAAGTCTAAGGGAAATAAGGATTATTGGATACCCTGTCGGGATTGTGAAGAGGTATTGCCAAACAAAAGTGCACTTTATAAACATAGAAGCAGGGAACATTGTAATATGACTGACAGAGAAGACAGTCTGTCCTACTGCAATACATGTGAAGATGATTACGATCAATCATCTTCTCACAAATGCATGAATAAGAACAAAAATAAATACTTTTGTCTGGTCTGCGGACACTCATTCCGAACCGTTACCCAAAGGAATGAACACCTGCGCATCCACACTGGCGAGAAACCATTCAATTGCAAGGAATGTGGCATGACTTTCAGAAGGCTAAGTGCATTACGGAATCATCGAATATCCCACCAAGATCCAGAAGTTCCTACTTATGTCCATTTGCTTTTAGAGGTTCCCGGCCTAAATCCTACCCCTAAACGCATTATTGAAGAACTACTGGAGTATCATATTAAATTAGAAAATATTGTTGACGTTTCTAAGATATCTTTTCAAAAGGATGACAAAGTAACAATTCCTAAAACAAAAGAAGAGTTAATTCAGCTATTAGAAATAGAAGGCGACGAATTAATACAATGGAAAAAGGATCTTATGACTCAAATTTATTTAAGGAAATTCGGCCAAAATCACGATTTTGATAAAGATAATCCTTCAACATCAACTTTTAATCAACCAAATATAAGTCAAGCAAGCTGTAGCGTTAGTAGCTATAGCTCTATAGCTTCTACTAGCTATCCTATTACGCTTAATATTCCTGGAGAGGAGATATCCGATGTAAATCTACAACTATTACTTCGCGAAGGTGTCGTAGTCAATGGTTCTCAGATGGTTCCCCTTTATCCCAACTATCCTTTCTTACCAGAATCTACGTCCGATATTATTAACTCAGGAATTAGCATAGAAATTTTACAGGACGTAGATAAATCTGCTATTATCGATATGGAATAA
- Protein Sequence
- MDEKSLTPLILCMENANGEDVALKIEPTDNFKTFLDIAKTLLGFEVDINSITRNETVSLTDNIYEFLMNAEKNDPLNISTELNLDILEENASSDFVYMLDDGTQINASQIQFDNDEPEEKFNVNELPFIKRIDTTEAVDDNKINDATEIRTHNIESPLRKCKHVNPKKSFASTLPFRVLPNKAKNFEAQVNTFLAKRPTYFFNNIPATKLSSPIANINRDNNQIKSVQDITYTREQVLDLVKDSPLAANIENMNNSNNEIRRHARKTDPCKPVPKKIESTQPAINETPKKTKNNTQMCFVCEKYLDRVKDKLYIFDKEDQKLHRSLRQTKQSEDLKVLCDKCLKEHFRPGVVKDPELTLEDNEFLVIRNNQQFVFHRNIMDNNKSPKLEKIESENTKVLDDDEEVKFVKMIAETDNEIINNDNINVNNNVVVIKEEYQSEPEETNINNLDAVNENLEDFLGKYQEIDLAEAKCRFCYINFPDINCIIEHGLEHKHDIVEDGQIFPCPLCDYGYATHKWLKFHIRIAHDENFNKDNCNNVKQLFEKEKNNENSEGYLKSTENGGSQSKAVETDENSVDNVNKDSLEALISSPIAKRTRSSITKKKESCDKESSDKPEDIKPVEENHEMNIKTTLEVDPSKDIFSANDIKLDVLVKSEPQDKSDNESIWILEAEELSDNELCNDNSLWSFENKIKYKKEKSSKEKTHMSCQLCNQILVSKDSLKTHKCAKKRGRKRKNVNNDDVYVATEDEKEKEIKKKTRDYKRESQVMTCHNCNESFTSKVRLKFHMQFYENKCSSRNEGSYKCSDCKLNKVFSTENALFDHVHFDHPKQKRWQCPVEECGKTFYLRATLTKHSRGHTDTRRYVCPSCGKRFFDKQTLDEHGVTHLKIKPYQCHICLKQLTRRSRLRMHLRAHEEELSPALVYVCRVCARAFKDHTDAEEHGICFSSCVDVMTMPATHLCPTTGLLSDQPQNIKQLEEIFAKHKIYEPRDEDKKKSMLSQLSDAAKVVINVVEIEKAFRCEYCEEVFFLEDNLNNHRDLHKNVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRPLPFKNKTETNDVGSESASGILGYGGFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHPRNNMIHQCSTCHLTFPNSWSVSYHKKKVHGVQIGKKSKGNKDYWIPCRDCEEVLPNKSALYKHRSREHCNMTDREDSLSYCNTCEDDYDQSSSHKCMNKNKNKYFCLVCGHSFRTVTQRNEHLRIHTGEKPFNCKECGMTFRRLSALRNHRISHQDPEVPTYVHLLLEVPGLNPTPKRIIEELLEYHIKLENIVDVSKISFQKDDKVTIPKTKEELIQLLEIEGDELIQWKKDLMTQIYLRKFGQNHDFDKDNPSTSTFNQPNISQASCSVSSYSSIASTSYPITLNIPGEEISDVNLQLLLREGVVVNGSQMVPLYPNYPFLPESTSDIINSGISIEILQDVDKSAIIDME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -