Basic Information

Insect: Monopis laevigella
Gene Symbol: -
Assembly: GCA_947458855.1
Location: OX375842.1:26808488-26818995[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.3e-06 0.00012 23.4 2.7 1 23 323 346 323 346 0.97

2 8 2.1e-05 0.0018 19.7 0.9 3 23 354 374 353 374 0.97

3 8 4.3e-05 0.0037 18.7 3.3 1 23 381 403 381 403 0.99

4 8 1.3 1.1e+02 4.7 0.5 3 21 413 431 412 436 0.90

5 8 1.4e-05 0.0012 20.2 0.9 1 23 444 467 444 467 0.94

6 8 2.5e-05 0.0022 19.4 0.8 1 23 473 496 473 496 0.94

7 8 1.6e-05 0.0014 20.1 3.1 1 23 505 527 505 527 0.97

8 8 3.7e-05 0.0032 18.9 1.0 1 23 533 556 533 556 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.3e-06	0.00012	23.4	2.7	1	23	323	346	323	346	0.97
2	8	2.1e-05	0.0018	19.7	0.9	3	23	354	374	353	374	0.97
3	8	4.3e-05	0.0037	18.7	3.3	1	23	381	403	381	403	0.99
4	8	1.3	1.1e+02	4.7	0.5	3	21	413	431	412	436	0.90
5	8	1.4e-05	0.0012	20.2	0.9	1	23	444	467	444	467	0.94
6	8	2.5e-05	0.0022	19.4	0.8	1	23	473	496	473	496	0.94
7	8	1.6e-05	0.0014	20.1	3.1	1	23	505	527	505	527	0.97
8	8	3.7e-05	0.0032	18.9	1.0	1	23	533	556	533	556	0.96

Sequence Information

Coding Sequence: ATGGACTCAATTTGTGCAACGTGCCTGTGTACTGATCGCAGAGCTGTGCTTGTAAATGACATTAAACAGTATACTGATTTATGGTATCCTAATATTTCCTTAAACCCGTCAGATAATATTTGTTGGGAGTGTGAAGCAGTTTTTGTAAAGCTATGGAATTTTTATCAAAAAGCACTAAAAGCACAGGGAATCCTTAAGAATCATGAGGCATCCAAGATTCTACCAAGATTATCTAATTTATCTTTATCAGAAACAAAACTTAATGAATTTATAATTAAACAAGAAATTAAAGTAGAACCTGAATACCTTGCCTTAGAAAGTGAATCTGTATCAGAAATACCTAGTAAAAAGAGAAAAAATAATAAATCAGTTAAGGAATATAAAAAGGAAACAAAGATTTCTGTCAAAGTTATTTGTGATGATGATTCCATTAATGATTTTAATGACTTTTCTGATGATTTAAATGATTATGAAGATAAAGTAAAAATTGAATCTATAGATTTAGAAATTAATCAAAGGGAACCAAATTTTCTTAACAGTGAAGATAATGATTATTTTATTACTACTACTTTATATGATGGTACTGAAAGGAAATTACCTTTTGAGCCTTTAGAAAAAGAAAAAAGTTACAAGATGAGAGTTTTATTAGAACATGAAATGTTAAAAATGAGGGAAGAAGAGAGAATGTCAGAGTACTTCTTAAGATATACATATAAATGTGAGAAATGTTTACTGATCTATCATGGAGAAAAGGTTTATAAGCAGCATTTAGAGAAGAAACATAATAATGATCCAAGTTACTATGCATGTTCAATATGTGATGTACGGACAAGTGGATTAGACAAGCACATTGCACATTTCGTTCGACACTATATTTCTTATCATTGTAAGAACTGTCATTATCAAAGTTTAAACTTTGGTCGCATTGTGGAACATCAAAGGCATGAGCATAGTAAAGGGGAGCACTTTGAATGTAAAACTTGTGGAAAAGTTTTCAGTAGGAATAGACAGCTGCAGTACCACTACAACAAAATGCATAGAACTCCTCCGTGTGAGCCATGTAAATTCTGTGGGAAGACTTTTGCATCTAAAACTGGCTATGATTATCATATGCGAACACACGAAGGCAAATTTACAATGTACAAATGTCATATATGTAAAAAAGACTATAAAGAGAAACTGGGGCTAAAAGTCCACATGAGGTCGCATATAACCGAAATTAATGAGAACGCATTTTGTGCTGAATGCAATATGCAATTCAAAAACGAATTTATTTACAAAAGACATTTACAGATTAATGCTAACCACAGAGAGCCCGGCGTTATGAAGTATGAATGTTCGTATTGCGACAAAAAGTTTTATCATAAACCAGGGTTAAATATACATATGGATGCTATTCACTTAAATAAAAGAGCTTACATATGCTCCATATGCAATAAGGATTTTGGCAGAAAAGATGCGCTAAGAAATCACATAACACATGGCCACGATGGAGTGCCTCGACCGAGAAATCATATTTGTTCATACTGCGGAAATCGATTTACGAATCAGAAGGTATTGAAGAACCACATCCGCACGCACACGGGGGAGCGGCCGTTCAAGTGTGAGCTGTGTTCGCGGACCTTCGGCCAGAAGACTACGCTCAACACTCACATCAAAGGCGTACATAATAAGAAATAA
Protein Sequence: MDSICATCLCTDRRAVLVNDIKQYTDLWYPNISLNPSDNICWECEAVFVKLWNFYQKALKAQGILKNHEASKILPRLSNLSLSETKLNEFIIKQEIKVEPEYLALESESVSEIPSKKRKNNKSVKEYKKETKISVKVICDDDSINDFNDFSDDLNDYEDKVKIESIDLEINQREPNFLNSEDNDYFITTTLYDGTERKLPFEPLEKEKSYKMRVLLEHEMLKMREEERMSEYFLRYTYKCEKCLLIYHGEKVYKQHLEKKHNNDPSYYACSICDVRTSGLDKHIAHFVRHYISYHCKNCHYQSLNFGRIVEHQRHEHSKGEHFECKTCGKVFSRNRQLQYHYNKMHRTPPCEPCKFCGKTFASKTGYDYHMRTHEGKFTMYKCHICKKDYKEKLGLKVHMRSHITEINENAFCAECNMQFKNEFIYKRHLQINANHREPGVMKYECSYCDKKFYHKPGLNIHMDAIHLNKRAYICSICNKDFGRKDALRNHITHGHDGVPRPRNHICSYCGNRFTNQKVLKNHIRTHTGERPFKCELCSRTFGQKTTLNTHIKGVHNKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -