Mlae036480.1
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- -
- Assembly
- GCA_947458855.1
- Location
- OX375849.1:22069854-22083637[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2 1.7e+02 4.0 0.3 2 23 6 27 5 27 0.96 2 13 0.0013 0.11 14.0 4.9 1 23 973 995 973 996 0.95 3 13 6.6e-06 0.00057 21.3 0.8 2 23 1100 1121 1099 1121 0.97 4 13 2.4e-05 0.0021 19.5 1.6 1 23 1127 1149 1127 1149 0.98 5 13 0.00023 0.02 16.4 5.9 1 23 1155 1177 1155 1178 0.96 6 13 0.38 33 6.3 2.1 5 23 1191 1209 1190 1209 0.97 7 13 0.0007 0.061 14.9 0.5 3 23 1216 1237 1215 1237 0.97 8 13 0.064 5.5 8.7 0.1 2 23 1255 1275 1254 1275 0.96 9 13 7.7e-05 0.0066 17.9 1.9 1 20 1281 1300 1281 1303 0.91 10 13 0.0051 0.45 12.2 0.3 1 23 1311 1333 1311 1333 0.98 11 13 0.017 1.5 10.5 7.3 1 23 1339 1361 1339 1361 0.98 12 13 2.3e-06 0.0002 22.7 1.5 1 23 1367 1391 1367 1391 0.96 13 13 0.0012 0.11 14.1 5.1 1 23 1397 1419 1397 1420 0.95
Sequence Information
- Coding Sequence
- ATGGAGCAAGCAGTTCAATGCCCGGTGTGCACCTTGTTCCTACACAATGGCATGTCCCTGGAGAGTCACTTGGACACTCATCCAAAAGATCAAGTCATCAAAGCTCTGTGCAGTCTTTCAGCAAGTAAAAGTAATTATTCTAGTAGAAGTTCGACGCCATCCCTTTCAGAGAAATCGTACAGGAGTAGGTCTCGCACCCCAGCCTCTGAAGAAAATGTACAGAGGTGGAGTGGGGGGATCCCCGACCAGTCATACTGGCGTCGATTGCCCAGCCGAGTTCCTAACAGACCACCCAGCAGAGTACATAGTCAAACACCCAAACCTACTAATGCTAGAATCGAACCTCCAGATGTCAGAATTGGAGAACTTACTTTTGAAAATTTAAACACAAATTTGTCACCTATTTTATTTTCTGGTGCCACATCCATGAAGTCCGACAAACCATCTATTGTTGCTGCTCCAGCTTCGGACTGTGAGCCATATTCTTATGTGCAAGATCAAAAAGAAGATTTGGAAATAAAATATTCTAGAAGCATGGAGTACAATGCTCCCAGTAACATGGCCAATGTGTTTGCATGTAGCACTCCAAACCCCACCATTAAATTACAACCTTTAATATCTACTGCCAAAAGAAACAATGATTTAGTTAATATCAATGTAGTGAATAATAGCAATGGTTATTTAAACCAGAAAACTGATAATTTAACTATTCTGAAGACTGACTTAGGCTCCGTACAGTACATATCGTCGAGAGGGAACACAATGCAGATGGTGGTGCCCACATCTCAGTCTCTTGTCAAGTCCCACAATAATCTTATTTTGCAAACTAATATGTCTAACTCTTCTCAAACAGTTCACAAGACAGTTTCATCTACTATTTTGCCTCTTCAATTTGGTCACCTAACAACAAGCTCTCTGACACCGGCTAAAACTGTTGTTGCTCAAAATTCACAGATTATATACAGAGAGATGGTACATAACACTGAAAACAAGCCATTTATGTCTGGTACAGCTGAGAGTTTACCGGGCCCTAGTCAGGCAGGTATAGTTGGAGGTTTACCAGGGCATAGTCAGGCAAGTACAGTTAGTGGTTTGCCAGGGCAAAGTCAAGCAGGTACAGCTAGTGGTTTGCCAGGCCATAGTCATACTGCCCGTTATCACAATCTAATGTTTGTTCATCCCTATAAAGATCCAGGGTTAATAGGCCAAGTTCCAAAGACTGTACCTGCAACTATTACATCCACCAATAACCAAAAAACTATTAATGAACCCAACAAAACATTGGTAATAGAAATAGGGCCAAGATTACAGAACACACCTGTGTGTACCCAAAATAGTGTAGAGATATCTAAAGTCAATGATAATATCAGGGATAATAGGACAGAGAGTCCTGATGTGGATATTCATAATCAGAACAGTATGGAAAGAGGTCTCAAAATTTTGAGTAATATTAAAGTAGAGGTGCCTGTCCAACACCATCATAGTATGCTGGGCAAAGTAATTGATATCACAGATCCTGACTATGTTAACTATGAATATGGAAATTTAACATCTAATAGAAGGGAAGGTATGATATCAACCACAAATGATAAAAAATTACATACACATACATTTTCTGTTATCAAGAATGTTGGAAATCCTCCAACATATAAGGACTCTCGCAAGCCCACTGTAGATAGTAAACATTCAGACATGGAATCTTTGGACAGTTGTCCTGTTCCTGACTTAATTTGTAATGAAAAGCCATCAATCTCCCCCTGCAGTGAGTTGTCTGAAAATGGAGATAATGCAACAGATAATATGAGTACTCTTTCTTCCAAAAGAGCCATTGATACAAAACAAGAGACTGAGAACTTAAAATCTAGTAATAAAGACGAACTACCTCAAAAACCTTATTGGAATCAGTCCATAGGGTCAAAAAATGTTTTTACAAGAAAACCAAAAAAGATTCTCCAAATTAAAAATAGCAAATTTCCCAAGACAGCTCCTTCATGTTCCCGCACACCAGATCATGTTGTGGGGGAGGTGAAGAAGAAATATTCAAAAACAAGCTCATACAATGTAGATAGTAATATATGTACTTCAAATATTTTTGATGCTGACACTGAGGAGCAATCTATGGACATAGAACCAATGGCTCACACCTCTTACAATGAATCTGCAGATGTGGACCTGAAACAGATAAAGCAGGAAGCCAACAACAGTGATGAGTTGATCATCCCAGATGTTCTGAAACTTTCAACCAAGGACATGACTCCGGCTGAAACAATCAGGCCCATTAATATAAACAATTATGGAAATAACTTTAATTCAGAATTGGACCATAGAAAATTTATAGAATTAGAAAATGTGTCTAAAAATAAATATGTCAATATGATGAATGATAATTATTTTGGTGATAACATTTATGCTGACTACTTTACTCCAGACAGGGTAGAGTCATTTGGAGAGACTATAAGAGAGTCTGAAAATTTAGAAGAAGGAAGCCAGAGTGAAAACTTTATTATTCCAAATTATGAACCTAGTTATAAAGAGGATGGTAATTGTACAAATTACACTCTGACCACAGAAGGAATGTTAGAGGAGGTGGAGTTTAGTGATGATAATGATTGTGAAGGGGAGTCGGGTGAGCAGGACAGTAAGTTGGACGTGCTGAGCGTGTCCCGCAGCGAGAGTGGGGAAGTGCTGGACATCTGTGCCAATGAGAAGATGCCCCCCCGGGGAGAGCTCAGTGGACAAGAAAGCAATGGTGACATGGATGCTCCTTGGACAGGCATATATTCCGAAGTAACCCCACCAGAGCCCTATGATCTGATTGCGCGGGAGTCTTGGATATCTGACAGCTCAGATATGGATGCGAGAGACAGGCATGAATTTATAGATGTTGAAATAGCGCTGGAGAAACCAATTCTTCAATACTCGTGCACACACTGTGATATAAGTTTCCCCACGCTCAAGGAACTCAATGCGCATCACACTCAGCACCACAGCAACACCACCAAGAGTGCCTCCGTCCAAGGTCAGCGGGCAGCTAACAAACTTGACAAACTTCCCATTGCACGCATCAAGAAAGAAGACAATAAAAATGATATTGATATGCTTCCAGAAGTATCAACTGACATAAAATCTGACTTAAAGTCCCAGATAATATTTGAGGATATAAAGGAGACAAAGCCAATTATAAGCGAGCTCATCAAGAAGGAGCGCCGGAAGAGAAAGGACTATATTTGCTCCACCTGCAAAGAGGACCAGAAGACTGACATAGGATTTCATGAGCATTTGAGGATACATCCGCTGGAATGTTTGACTTGCGGAAAGTACTTTTACAGACGTGCCAACCTAAATATGCACATGCGGATGCATCTTGGAATACGAAATTTTAAGTGCGAGGTGTGCGAAAAGCGATTCTCGACGCGGCAGAAGTTACAAGAGCACCAAAACGGCCACACCGACCGAACGCCGTACCAGTGTAATTTCTGTACAAAGAGCTTCCGGCGCTATTCCAATATGATACAACATAGAGACCGCCACCACCTAAAGAAGAAGGTAAAGCAGCGCGACCTGGTGTGCCACTGCGGCGCGGTGTTCCACTCCCGCGCCAAGCTGCGCTGGCACGCGGAGACGCACGCGGAGCGGCCGCGCGCGTGCCCTTACTGCCGCGACCGGTTCGTGCACGCCGCGTCGCTCACGCGCCACATCCGCCGCGCGCACGACGCCTACTACGTGCCCGGCGCGCCCTACCCCAACCTCGTGCTCAACGTGCCCTGTCccatctgcaaacagATATACCTCAGGACGACATTAAAGAGCCACATGGCCACCCACACAGGTAAGCGTCCCTTCCTCTGCCACATCTGCAACAAATCCTTCACCACCAACTGGAATCTCAAGCTCCATCGCTGGGTCCACATGAGCCGGTCTTCCAAGCCTTACAAGTGTGGGTTGTGTAAGAGTGCCTTCTTCAGACTAGCAGAGTACACCGCCCATATGAACGCTCACAAATCTGTCAAACCTTACACCTGTAACTACTGCGGCTGTCAATTCATTAGGAAATACAACTGTCAAAGACATGTTAAAGAACATGAGATGGCCAAAAAGTTTATATGTAAGGTCCCGGACTGTGGGAAGTCGTTCCACAGGAGTTATTACTTGACGGACCACATGAGGGTTCACAGCGGGGCCAGACCGTTCTCCTGTAACATCTGCGGGAAGACCAGTAGCAACAAATCTAATCACAATAAACATGTTAAGGTACACCATTCTAGAGACCCTATTCCGACTGAGGCCTAA
- Protein Sequence
- MEQAVQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCSLSASKSNYSSRSSTPSLSEKSYRSRSRTPASEENVQRWSGGIPDQSYWRRLPSRVPNRPPSRVHSQTPKPTNARIEPPDVRIGELTFENLNTNLSPILFSGATSMKSDKPSIVAAPASDCEPYSYVQDQKEDLEIKYSRSMEYNAPSNMANVFACSTPNPTIKLQPLISTAKRNNDLVNINVVNNSNGYLNQKTDNLTILKTDLGSVQYISSRGNTMQMVVPTSQSLVKSHNNLILQTNMSNSSQTVHKTVSSTILPLQFGHLTTSSLTPAKTVVAQNSQIIYREMVHNTENKPFMSGTAESLPGPSQAGIVGGLPGHSQASTVSGLPGQSQAGTASGLPGHSHTARYHNLMFVHPYKDPGLIGQVPKTVPATITSTNNQKTINEPNKTLVIEIGPRLQNTPVCTQNSVEISKVNDNIRDNRTESPDVDIHNQNSMERGLKILSNIKVEVPVQHHHSMLGKVIDITDPDYVNYEYGNLTSNRREGMISTTNDKKLHTHTFSVIKNVGNPPTYKDSRKPTVDSKHSDMESLDSCPVPDLICNEKPSISPCSELSENGDNATDNMSTLSSKRAIDTKQETENLKSSNKDELPQKPYWNQSIGSKNVFTRKPKKILQIKNSKFPKTAPSCSRTPDHVVGEVKKKYSKTSSYNVDSNICTSNIFDADTEEQSMDIEPMAHTSYNESADVDLKQIKQEANNSDELIIPDVLKLSTKDMTPAETIRPININNYGNNFNSELDHRKFIELENVSKNKYVNMMNDNYFGDNIYADYFTPDRVESFGETIRESENLEEGSQSENFIIPNYEPSYKEDGNCTNYTLTTEGMLEEVEFSDDNDCEGESGEQDSKLDVLSVSRSESGEVLDICANEKMPPRGELSGQESNGDMDAPWTGIYSEVTPPEPYDLIARESWISDSSDMDARDRHEFIDVEIALEKPILQYSCTHCDISFPTLKELNAHHTQHHSNTTKSASVQGQRAANKLDKLPIARIKKEDNKNDIDMLPEVSTDIKSDLKSQIIFEDIKETKPIISELIKKERRKRKDYICSTCKEDQKTDIGFHEHLRIHPLECLTCGKYFYRRANLNMHMRMHLGIRNFKCEVCEKRFSTRQKLQEHQNGHTDRTPYQCNFCTKSFRRYSNMIQHRDRHHLKKKVKQRDLVCHCGAVFHSRAKLRWHAETHAERPRACPYCRDRFVHAASLTRHIRRAHDAYYVPGAPYPNLVLNVPCPICKQIYLRTTLKSHMATHTGKRPFLCHICNKSFTTNWNLKLHRWVHMSRSSKPYKCGLCKSAFFRLAEYTAHMNAHKSVKPYTCNYCGCQFIRKYNCQRHVKEHEMAKKFICKVPDCGKSFHRSYYLTDHMRVHSGARPFSCNICGKTSSNKSNHNKHVKVHHSRDPIPTEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -