Basic Information

Insect: Monopis laevigella
Gene Symbol: -
Assembly: GCA_947458855.1
Location: OX375846.1:3474964-3479571[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.7 2.4e+02 3.6 3.8 1 23 59 82 59 82 0.96

2 14 0.05 4.3 9.1 0.4 2 23 106 128 105 128 0.94

3 14 0.0041 0.36 12.5 0.5 1 23 152 174 152 174 0.97

4 14 5.4e-06 0.00047 21.5 0.7 1 23 178 200 178 200 0.98

5 14 0.043 3.8 9.3 2.0 1 23 249 272 249 272 0.95

6 14 0.84 73 5.2 0.2 2 23 298 320 297 320 0.92

7 14 0.64 55 5.6 0.4 1 23 342 364 342 364 0.96

8 14 1.7e-05 0.0015 20.0 0.2 1 23 368 390 368 390 0.95

9 14 0.023 2 10.1 3.4 1 23 395 418 395 418 0.93

10 14 0.038 3.3 9.4 1.3 3 23 427 448 425 448 0.93

11 14 6.3e-05 0.0055 18.2 4.1 1 23 453 476 453 476 0.97

12 14 1.1e-06 9.5e-05 23.7 0.6 1 23 482 504 482 504 0.98

13 14 2.3e-06 0.0002 22.7 1.0 1 23 510 532 510 532 0.99

14 14 0.00052 0.045 15.3 0.2 1 23 538 561 538 561 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.7	2.4e+02	3.6	3.8	1	23	59	82	59	82	0.96
2	14	0.05	4.3	9.1	0.4	2	23	106	128	105	128	0.94
3	14	0.0041	0.36	12.5	0.5	1	23	152	174	152	174	0.97
4	14	5.4e-06	0.00047	21.5	0.7	1	23	178	200	178	200	0.98
5	14	0.043	3.8	9.3	2.0	1	23	249	272	249	272	0.95
6	14	0.84	73	5.2	0.2	2	23	298	320	297	320	0.92
7	14	0.64	55	5.6	0.4	1	23	342	364	342	364	0.96
8	14	1.7e-05	0.0015	20.0	0.2	1	23	368	390	368	390	0.95
9	14	0.023	2	10.1	3.4	1	23	395	418	395	418	0.93
10	14	0.038	3.3	9.4	1.3	3	23	427	448	425	448	0.93
11	14	6.3e-05	0.0055	18.2	4.1	1	23	453	476	453	476	0.97
12	14	1.1e-06	9.5e-05	23.7	0.6	1	23	482	504	482	504	0.98
13	14	2.3e-06	0.0002	22.7	1.0	1	23	510	532	510	532	0.99
14	14	0.00052	0.045	15.3	0.2	1	23	538	561	538	561	0.96

Sequence Information

Coding Sequence: ATGTCCTTTTCTTTCTTAACAGGACAAGACACTACGAAAGCCGAGACAACTCGTACAGAAAGCCGGAACTATAAACAATTGAAGTTCAAAAATTATATAAATATACCTAGCCACCTAGATTATTTAATGAAATATTCCAACTGTACTCCGTTCAGACACAGATCTACGGAAGGATACCACTGTGCATTTTGTACGGAAATATTTTTGGATCCTAAATATCTAAGGGAGCATACACACAAACAACACAGACTACAACAATCTATTAAATTACGACCAGAAACACCAGTACCACTAAAAATAGACATTACTGATTTGAAATGTAATATATGCAACGAAAAAATAAGCAATATTAAATTATTTTTACAACATATTCAAGAAACCCATAAGAAACGTCTTTGTACAGATCCTAATAAATTTGACGTGGCTGAATTTAAATTAAAACCTCATCCAATATATGATTGTGTACAATGCGACTCTACTTACGAAACATATAAAATGCTGCTACAGCATATGAATATTCATTACAATAATTATGTTTGTGAAACGTGCGGTAAAGGGTTTGCTAATAAACGAAGATTAAGATCGCATATAACCACACACACAACTGGAGAATTTGTTTGGTTCGGACAAGTTCCTGTGAAAACTGAAAGAACAATTAAAGATATTCGAAAGTTGGGCTATGACGTGATTACTCTAATGAAGTATTCTAACTGCACGCCGTTCTTGAGTAAGACTTGGCAAGGATACAGCTGTCTTTTCTGCCATAAGATGTTTCTGGATCCCAATGAACTCAAGGAACATAACAATAAAGAGCATAGGCGAACGACTAATACCTTAAAGAACTTTAAACTTCAATCACATATAGCATTAAAATTTGATATATCCGATTTGACTTGTAACGTTTGTAAAGAAAAAAATCCTAATATAGAAACGTTAATACGCCATCTTAAAGATAGCCATAAATATCATTTTTTTACGGATAAAATGGAAGTAATTGAATTTAAATTAAATGCTGGTCCAATATACAATTGTGCATTTTGCGACGCTACTCAAGAAACGTTTAAAATGTTATTACAACATATGAACGTGCACTACAACTATTATATATGTGAACTATGCGGAAAGGGCTTTGCCAATAAGAGAAATTTAATTGCGCATAATTATAGACACGAATCAGGTAACTATGCCTGTCAGTCTTGTGACAAAGTATTTTCGACCAGAGAAAAGAAATGTGTACATGAAAGGTTTTCCCATAAAGGAGGAAAAAGAAAAATAAACTGTCCATATTGCCCGGAGACGTTCACCGGATATTACCGTCGAAATCAACATATCCATTCCAAGCATGTTGAAACTCCTTATATTTGTACTATTTGCAAACGCGGTTTCACATTAAAACATAATTTAACACATCATACGAGAATTGTACACTTAGGGGAACGCAATTTCGTCTGCACGGAATGCGGCAATAGTTTCGCAACTAGGAAAACCTTAACCAACCATATGATCACACACACAGGAGAAAGAAGTTACAAATGCGAAGTGTGTAGCAAGGCTTACGGGAGAAAGAAAACATTAAGAGAACACATGAGAATTCACAACAATGATAGACGATTCAATTGCCCTATATGCGAGATCGGTTTCGTACAAAAAAGTAGCATGAAGGGTCACTTATTGTCAAAACATGGAATCAAATGGCAAAATAATGAAACATATAATAAAAAATCGTGTTTAATAACCAAAAAATAA
Protein Sequence: MSFSFLTGQDTTKAETTRTESRNYKQLKFKNYINIPSHLDYLMKYSNCTPFRHRSTEGYHCAFCTEIFLDPKYLREHTHKQHRLQQSIKLRPETPVPLKIDITDLKCNICNEKISNIKLFLQHIQETHKKRLCTDPNKFDVAEFKLKPHPIYDCVQCDSTYETYKMLLQHMNIHYNNYVCETCGKGFANKRRLRSHITTHTTGEFVWFGQVPVKTERTIKDIRKLGYDVITLMKYSNCTPFLSKTWQGYSCLFCHKMFLDPNELKEHNNKEHRRTTNTLKNFKLQSHIALKFDISDLTCNVCKEKNPNIETLIRHLKDSHKYHFFTDKMEVIEFKLNAGPIYNCAFCDATQETFKMLLQHMNVHYNYYICELCGKGFANKRNLIAHNYRHESGNYACQSCDKVFSTREKKCVHERFSHKGGKRKINCPYCPETFTGYYRRNQHIHSKHVETPYICTICKRGFTLKHNLTHHTRIVHLGERNFVCTECGNSFATRKTLTNHMITHTGERSYKCEVCSKAYGRKKTLREHMRIHNNDRRFNCPICEIGFVQKSSMKGHLLSKHGIKWQNNETYNKKSCLITKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -