Mlae007983.1
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- -
- Assembly
- GCA_947458855.1
- Location
- OX375844.1:23325882-23340821[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.32 28 6.5 0.9 2 23 191 212 190 212 0.96 2 28 0.0019 0.17 13.5 0.2 2 20 243 261 242 263 0.93 3 28 8.2e-05 0.0071 17.8 0.3 2 23 288 310 287 310 0.96 4 28 0.12 10 7.9 2.1 1 23 380 403 380 403 0.95 5 28 0.051 4.4 9.0 0.1 2 23 429 450 428 450 0.94 6 28 6.6e-06 0.00057 21.3 2.0 2 23 489 510 488 510 0.97 7 28 3.2e-05 0.0028 19.1 1.8 2 23 539 561 539 561 0.97 8 28 0.0086 0.75 11.5 0.1 1 23 611 634 611 634 0.96 9 28 0.0015 0.13 13.9 0.2 1 23 692 714 692 714 0.97 10 28 0.043 3.8 9.3 6.6 1 23 725 747 725 747 0.97 11 28 0.22 19 7.0 1.9 2 23 759 780 758 780 0.96 12 28 0.0089 0.77 11.4 1.1 1 23 790 812 790 812 0.98 13 28 6.8 5.9e+02 2.3 2.6 2 23 838 859 838 859 0.94 14 28 0.0016 0.14 13.7 2.8 1 23 870 892 870 892 0.98 15 28 3.3e-05 0.0029 19.1 2.0 1 23 900 922 900 922 0.98 16 28 0.00043 0.037 15.6 0.1 2 23 942 964 941 964 0.97 17 28 0.21 18 7.1 2.4 1 23 982 1004 982 1008 0.95 18 28 0.68 59 5.5 3.1 1 23 1011 1033 1011 1033 0.95 19 28 0.0037 0.32 12.6 2.8 2 23 1044 1066 1043 1066 0.95 20 28 0.0018 0.16 13.6 0.2 2 23 1088 1109 1087 1109 0.95 21 28 8.3 7.2e+02 2.1 5.6 2 23 1152 1174 1151 1174 0.95 22 28 0.0069 0.6 11.8 0.3 2 23 1190 1211 1189 1211 0.95 23 28 3.2 2.8e+02 3.4 3.3 5 23 1221 1239 1218 1239 0.94 24 28 0.051 4.4 9.0 1.0 2 23 1250 1272 1249 1272 0.94 25 28 1.6 1.4e+02 4.3 3.4 2 23 1289 1307 1289 1308 0.82 26 28 3.2 2.8e+02 3.4 0.5 2 23 1379 1400 1378 1400 0.93 27 28 0.033 2.8 9.6 0.2 2 23 1411 1433 1410 1433 0.95 28 28 0.078 6.8 8.5 1.0 2 19 1471 1488 1471 1490 0.91
Sequence Information
- Coding Sequence
- ATGGCACTCAAGCTCGGAAAATGTAGGCTTTGCCTTAAACTTGGCGACTTTTATTCCATATTCACAGTCGACAATGCGCTGCAACTTGCGGAAATGGTTATGGCATGTTCCAGAATACAGGTCTATGAAGGTGATGGACTGCCAGACAAAGTTTGTTCAGAATGTATAGAGAAGCTCAGTAGCGCATATATCTTTAAACAACAGTGTGAACGCTCCGATCAGGAACTGAGGAGAAACTATGTCCCACCACCAGGTTTTAGTATTACCCCTCCACCCAACCGACAAAGTAGTGACTCTGGATTTTCAAATCGGACTGATGCATCAAACCAAGTCAAGCATTCTGCTGCTGTTCCTGAAAAAGCTGCCGTCCGATCCTACAAGAGAGGTCACGACAGCGATGACGACGCCTCAGTCGTTAGTAGAAGGTACAACTCCAAACCTTCTAGTTCCCAAATAAATGACAAAAGGCAAAGAATAGAGCCTGACAATGTATCTGACAAAGAATCCGAATATGAAGACAATACGGCCTCACAGTTTTCCGCAGAGGATTCTGATGAACCTCTATTACTTAAATGCGATTTTTGTGACAAACAGTTCCTCACTAAAAAGAGTAGAGCGATACATGCTCGCATACACAGCAGGGAAAAAACAGTCATAGCGCCGAGCGAAGACGCGGCGATGGACTTCCCATCGGGCTACGAACAACCGGAAGACGAAGAGAAAGTATCTTGTGAAAAATGCGGTAAACAATTTAAACTAAAAATTATGTTAAAACGTCACTACGAAGTTTGCCCGGGAAAAGCTGTCGAGAAGAAAGAGCTAAAAGTTACTCTGGAAAATGTGTTGAATGACAATAAGATTGAATGCGAAATGTGTAAAGGTAAATTTAAAACTATGGACAATTTAGAAAAGCACATGAGAGTCGTGCACGCTGCCGTGATTAAGAAAAAAATGTCTCAACTGCCGACGCCCGTCACTAAACGGGAAACCGAGGCCTTGTCTTCGCCTGAGACGAAATCCATTCCCGACACAAAGCGTACGGCTGTACCATGTGTGTTCTGCCATAGACCGTTCGACAATTATTACGTTCATAACGCTCACTTCAATACGTGCACAAAGAGATCGAATGCCCAGACTTATGTATGTTTGGTATGTCGACGAAAATTTCAAAAGAAAACTCTTTATTTCGCGCATCTCAAAGATACCCATCTTAAAGAAGCTCCCTACAATTCGAAACCCGTTTCTAAGAAAACAGAAGAACAGTATCCCGAAACCGCCCAACTAGAATGTCGTCTGTGTAAGAAGAAACTCCCAACTCAAGAACTCTTGATCACTCACTTAGCGGCTCACATGGCCAATGTCGAAGAAGAGGACGACCCAGATGATCCTGACGGGGACAACTCTAGGTCAACTTTGGACGACTCCCGCTCGCAATACTCCGACAAAAGTTCCGGACGCACTCTCAAATGTACATATTGCGATAAAGTATTCACTTATAAAAAGTCATTAATGAATCACGTGATGAAACATACGACAGGAGAGATCGGCGTGAAGACGGAGCTACCGCCCGAGCCGCCCGAACCCGAGAGCGACTCTGACGACGATGGGGACAACACCTGCGACATTTGCGACAAGATGTTTTCCTACAAGAGACTTCTTATCCAGCACAAGCGTACCAAGCACAACTCGGGCTCAGGCGTGAAGCGCGCCAACGTCTCGCTCAAGAGCTGCGACGTGACGTGCCAGATCTGCGACATCACCATGAAGGTGGGCGACAGTCTGGCACACAACCGGATGCACTCGGACGCCAACATCCGGCCGCGCAATCTCTACATGTGTGTTGGTTGTAGTGACACCTTCAGCTCTAGCTCGGGGCTCGCCGATCATATTAAACTGGTGCATCGTCTCAAGCGGAGCTCGGCGCAGAAGTACACCGTCACCAACATGGCGGATTTTTGTGAGGTCGTTGTGACAAAATCGGAACCGCTGGATGAAATCCAGAGTCACAACGACTTTTTAGCGGTTCCAGGAAAACCCGTCGACGGCAAGAAGGCCACGGTGGATCTCGACGGGTTTACCTGCCCCATCTGCGGCAAGAAGATGGGCACCCTCATGTCCCTCAAGAGACACGTGAACTGGCACTCCAATGTGGGCAACAACATCGAAACCAAACATGAGTGTTTCGTCTGCAAAGAGACGTTCAAATTCATCCGACACTTCAAGATGCACATGCGAGAACACTATCACGACCCGAACTTGGATCCCAAGTTTTTGATCTGTTCGATCTGCAACCGGAAAAGTAAACACCTCCGCGCCGCCCAGATGCACATGAAGTACCATGACCAGACGCGTTTCCGCACCGAGGACTACCAGTGCTCCATCTGCAAACGCGTGTTCCAGTTCCGCAAGGTGTATCTCTCGCACATGGCTATCCACTACAAGCGCGGCGAGAGCGTGGCGCTGACCGGTGACGACGCAGGCCCGGCGGCCACGCTTACCGGTGCACCCAACGAGTGCACGCTCTGCGGCAAACTGTGCGGCTCCGAAACCTCGCTTAAGTGCCACATGGCTTGGCACCGCTCCAAGTCCTCGCTGTTCGGCGCACGATACGACTGCTCCTTCTGCGACAAGGTGTTCACCAACAAGAAGCGACAGGAGCTGCACACGCGCACGCACTACGAGGACGACAACGGCCCCTACAAGTGCCACATTTGCAGCAAGGGCTTTATCGACGAGGACTACTACCGCCGCCACATCAAGGGACACAACTTCGACCACCAGTCGCACAAAAAGCGCATCGAGAAGCTGCGTGCGAACAAAGTCAAGTGTCCGATCTGTCCCCGTTACTACCCGGATCTGGTGAAGCTGATCCGTCACCTTCGGCGCACGCACCCCGAGACCAAGATGATCAAGGAGGATCCTGATGCGCCGCCGCCGCCGCTGTTTCCTTGCAAACTCTGCGCCAAGGTGTTTCACACGGAACGCCGTCTGCGCGCGCACGAGGGTTCCCACCTACGGAGACACAGATTTTTTAAGTGCAAGTTTTGTGGAAAGAAATCTATCTCTCTCAAGAGCCACAACATCCACATCAAGGGACATCTGACGCAGAAGCACGTGGACGAGCCGCTCAAGTGCTACGAGTGCGACCAGACGTTCGTGCGCGGGTACTCGTTGCATCATCACCTGCGCGACGTGCACGGGATCTCCGAGACCTGGATCTCGGAGAGCGGGCAGGCCAGCGTGGACGAGCTGGCCGACCTGCAGTGCTCCGTCTGCTACAAGGTGCTTGCCTCCAAGGGGAACTTCGAGAGGCACATCGACTACCACAATCTGCTGCGGTGCAACTACTGCTTTGACTACTTCAACTCGCTTAAGTTCCTCGAGGGGCACCTCGCATTCTCGTGCGAGAAGAAGAAGCTCGTCGGCGACACCGAGGTCCATCCAAAGAAGGTGAAGTGCCACGTGTGCTACAAGGCGTTCCACGTGCAGGTGAAGCTCGACTGCCATCTGCGCACGCAGCATGATATCCGCGTGAGCCGCGAGCGCCACCTTAAGGAAAAAGAGATCGTGTGCGACTTCTGCTTCCGGAGCTTCGAGAACGAAGACGCGCTCAACCAGCACAAGCTCTACCACCGCACCATCGGCTACTATGGGTGCATCTACTGCAGCCGCAAATTCAAGACGCTCACCGCTTACCGCATGCACAAGAACCATCACTTCGCGCAGCTGCACGTGGACGACCCGGTCAAGTGCGAGCACTGCGACGAGACTTTCACCGCTTTCCGCGACAAGATCTACCACATGCGAGATGCTCACGGCGACGACAAGGAATGGGTCGTGCTGCCCAAGGAGGTGATCGAGGAGAAGTGCCGCATCTGCGACAAGACCTTCTTTAACGTGCAGCGACATCTACAGCATCACGAGGAGAACCGCTGCAAGAAATGCGGTGAGTACTTCCTGTCACGCGCCGAGTGCGACCAGCACCTGTGCGCCATCGAGAGCGACGAGGATCCCGACACCAACGATCGTGACATCCGATCCAAGTACGAGGAGTGCGAGTTCTGCTTCAAGCCCATCACCAAGACCAGCTCCAAGCTCAAGCATGACCTCATCCACAAAGGCTCCGGCGCCATCTCCTGTCGGTTCTGCGCTCTCAAGTTCAAGACGATGGATGCGTATAACATCCACGCGTTCTCGCACCGCAGCCGCAAGTACAAGCGGAACCCGCTCCGATGCCGCGCGTGCCCCGAGCGGTTCGTGCAGTACGGCCCGTTTGTCAAGCACATGAAGACGGTGCACAAGATGAGCGCCAAGATGCACTACCGCACCACCGTGCTGCCCGAGCGGTGCGTCGTCTGCTGCGGGATGTTCCCCAACCTGCACAACCACTACCGCGCGCACCTGGCCAACCGCTGCAACGTCTGCGGGAAGTACTTCACCTCCAGCCGCGTGTTCCTGGCGCACGCCTGCGACCGGGACGACGCCGCGCCCGGCAAGGTGTTCTCGTGTCACGAGGACCTCGACCACCTCATCAACACCTATATCCCCAAGGACGAACTCGACGACCAGAAGTACTATGGCAACACCGACGACGAGGACGAGCCCTACCCGCCGCCCGCCGACCCCGGAGCGTCACCCAAACCACTGGCGCGAGTGAAGTCCGCGCCGCCCGAGGACGCATCCGACCACGACCGATCGGCTCGGATCTCGGAGGAGAAGGAGCTACTTATGCCGATCTCGATCCAGTCCCCGATCATCTCGGACGTGCTGTCGCTGTACGAAGCCAAGCGCGAGGCCGAGCAGCGGATCGCGGCGGCCAAGGCCAGCGCGCCTGAGGACGACGACATCGTGGAGATCATCGACGACAACTCTGCGGACGCGGACGATGATCCCGACGACATCATCACTATAGACGACTAA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNALQLAEMVMACSRIQVYEGDGLPDKVCSECIEKLSSAYIFKQQCERSDQELRRNYVPPPGFSITPPPNRQSSDSGFSNRTDASNQVKHSAAVPEKAAVRSYKRGHDSDDDASVVSRRYNSKPSSSQINDKRQRIEPDNVSDKESEYEDNTASQFSAEDSDEPLLLKCDFCDKQFLTKKSRAIHARIHSREKTVIAPSEDAAMDFPSGYEQPEDEEKVSCEKCGKQFKLKIMLKRHYEVCPGKAVEKKELKVTLENVLNDNKIECEMCKGKFKTMDNLEKHMRVVHAAVIKKKMSQLPTPVTKRETEALSSPETKSIPDTKRTAVPCVFCHRPFDNYYVHNAHFNTCTKRSNAQTYVCLVCRRKFQKKTLYFAHLKDTHLKEAPYNSKPVSKKTEEQYPETAQLECRLCKKKLPTQELLITHLAAHMANVEEEDDPDDPDGDNSRSTLDDSRSQYSDKSSGRTLKCTYCDKVFTYKKSLMNHVMKHTTGEIGVKTELPPEPPEPESDSDDDGDNTCDICDKMFSYKRLLIQHKRTKHNSGSGVKRANVSLKSCDVTCQICDITMKVGDSLAHNRMHSDANIRPRNLYMCVGCSDTFSSSSGLADHIKLVHRLKRSSAQKYTVTNMADFCEVVVTKSEPLDEIQSHNDFLAVPGKPVDGKKATVDLDGFTCPICGKKMGTLMSLKRHVNWHSNVGNNIETKHECFVCKETFKFIRHFKMHMREHYHDPNLDPKFLICSICNRKSKHLRAAQMHMKYHDQTRFRTEDYQCSICKRVFQFRKVYLSHMAIHYKRGESVALTGDDAGPAATLTGAPNECTLCGKLCGSETSLKCHMAWHRSKSSLFGARYDCSFCDKVFTNKKRQELHTRTHYEDDNGPYKCHICSKGFIDEDYYRRHIKGHNFDHQSHKKRIEKLRANKVKCPICPRYYPDLVKLIRHLRRTHPETKMIKEDPDAPPPPLFPCKLCAKVFHTERRLRAHEGSHLRRHRFFKCKFCGKKSISLKSHNIHIKGHLTQKHVDEPLKCYECDQTFVRGYSLHHHLRDVHGISETWISESGQASVDELADLQCSVCYKVLASKGNFERHIDYHNLLRCNYCFDYFNSLKFLEGHLAFSCEKKKLVGDTEVHPKKVKCHVCYKAFHVQVKLDCHLRTQHDIRVSRERHLKEKEIVCDFCFRSFENEDALNQHKLYHRTIGYYGCIYCSRKFKTLTAYRMHKNHHFAQLHVDDPVKCEHCDETFTAFRDKIYHMRDAHGDDKEWVVLPKEVIEEKCRICDKTFFNVQRHLQHHEENRCKKCGEYFLSRAECDQHLCAIESDEDPDTNDRDIRSKYEECEFCFKPITKTSSKLKHDLIHKGSGAISCRFCALKFKTMDAYNIHAFSHRSRKYKRNPLRCRACPERFVQYGPFVKHMKTVHKMSAKMHYRTTVLPERCVVCCGMFPNLHNHYRAHLANRCNVCGKYFTSSRVFLAHACDRDDAAPGKVFSCHEDLDHLINTYIPKDELDDQKYYGNTDDEDEPYPPPADPGASPKPLARVKSAPPEDASDHDRSARISEEKELLMPISIQSPIISDVLSLYEAKREAEQRIAAAKASAPEDDDIVEIIDDNSADADDDPDDIITIDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -