Basic Information

Insect: Monopis laevigella
Gene Symbol: -
Assembly: GCA_947458855.1
Location: OX375846.1:9980001-10003274[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.036 3.1 9.5 1.0 1 23 78 100 78 100 0.97

2 11 0.0089 0.77 11.4 0.3 1 23 117 139 117 139 0.98

3 11 1.3e-07 1.1e-05 26.7 1.0 1 23 145 167 145 167 0.98

4 11 0.00022 0.019 16.5 1.6 1 23 174 196 174 196 0.99

5 11 4e-06 0.00035 22.0 1.0 1 23 202 224 202 224 0.97

6 11 3.6e-06 0.00031 22.1 1.1 1 23 230 252 230 252 0.99

7 11 1.9e-06 0.00017 22.9 0.3 1 23 258 281 258 281 0.96

8 11 0.00035 0.03 15.8 0.8 1 23 287 310 287 310 0.93

9 11 8.8e-05 0.0076 17.7 3.8 1 23 316 338 316 338 0.99

10 11 0.0003 0.026 16.0 1.0 1 23 344 366 344 366 0.98

11 11 1.2 1e+02 4.7 0.8 1 20 372 391 372 396 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.036	3.1	9.5	1.0	1	23	78	100	78	100	0.97
2	11	0.0089	0.77	11.4	0.3	1	23	117	139	117	139	0.98
3	11	1.3e-07	1.1e-05	26.7	1.0	1	23	145	167	145	167	0.98
4	11	0.00022	0.019	16.5	1.6	1	23	174	196	174	196	0.99
5	11	4e-06	0.00035	22.0	1.0	1	23	202	224	202	224	0.97
6	11	3.6e-06	0.00031	22.1	1.1	1	23	230	252	230	252	0.99
7	11	1.9e-06	0.00017	22.9	0.3	1	23	258	281	258	281	0.96
8	11	0.00035	0.03	15.8	0.8	1	23	287	310	287	310	0.93
9	11	8.8e-05	0.0076	17.7	3.8	1	23	316	338	316	338	0.99
10	11	0.0003	0.026	16.0	1.0	1	23	344	366	344	366	0.98
11	11	1.2	1e+02	4.7	0.8	1	20	372	391	372	396	0.92

Sequence Information

Coding Sequence: GGTGCTTTTTTAAAATCTCAGTCGGGAGAGATGTACCGAGTGGAAAGTGTTGCCACAGTAAAGGATACCACTCAGGGAGACAGCAGTCAATATATTGTAAAGAAAGTGGGAAAGAAGTTCAAGTGTTTGCTTTGTGAAAATATTAAGAATAGAAAAACGGGCACGTTGACATTTTCGGGGGACGCGGCGACTGTAGTGAATCACGTTCGGGAAGTTCATAAAGCGCGGGTGTACATCTGTTCTAAGTGTGGCCTCATCATGAGAAAGTGCAGCGACTATTCTGCACATCTGCAGGTACACAGAAAAGCATTGCCTACAGGAAAACATGAAACGGAGAAATATAAACTGTACGAATGTGATTTGTGTTCAAAGAAGTTTATGTCGCGTAACATCTTGATAGAGCACTTAAACGTACACAATAGAATGCGGCCATACGCCTGTGACAAATGCGATAAAACCTTCGCCTCCAAATATACACTAAAAGTTCACATGAAAATACATTTGGATAGACTGCGACCGTACAAATGTGTCACATGCGCGAAAGCGTTTTTCACACAACAAAACCTGTCACAGCACGAGAAGACACATTCGTCTGTCAAAGATTTTGTGTGCAAAATTTGTTCAAAAACGTTCGTTAGTCAACATAATCTGGAGATGCACGCGCTAGTTCACACCCGCGTCAAGGCATATACTTGTGAATTCTGTGATAAGTCCTTCGCGAGACGCGCCGAAATCCGCGACCATAGACGCACTCACACCGGAGAGAAGCCGTTTCCGTGCGACATTTGCGGCATGCGGTTTGCCCAGAGATCCAACTTGTTGTCGCACCGTCGCGCGACACACTTTGACGACAGACGCTATCCTTGCCAACTGTGTAACAAACGATTTAAACGGCGCAGGTTACTAGACTATCACGTGCAAGCGGTCCACACAGGAGAGAGGCCGTTCCAGTGCGACAAGTGTAAGTCCAACTTCGTATACCCCGAGCACTACCGGAAACACATGCGCATACACACCGGCGAGAGACCCTATGAGTGCGGGATGTGTCCGAAAGCGTTCAATACCCTGGACACCAGAAACAAGCACCGCTTCACTCACACGCAGTGCAAGCCGTACCAGTGCGGAGTGTGCTGCGCAGGATTCATGCGCAAACCCCAGCTCATTGCTCACGTCGATCACTTACGGCACGACTTCAAGCCTATGATTCTTAACCCTACTCCGAGATTGTCTGAAGACAATACGTTAATACAACCCGAGGAAAAAGATCAAAAAAAGCTCTACATACGTCGTAAAATTTTTAAAACCTTAGAAGAACAAGAAGATTCGGAAAAAGAGAGTGATGAGTACGATCCCGTGTATACGGTATCGTTTGAAACGCCGCTGTCGAATGTTGCCACAGAACTATTTGACCCAGACTCTGTAAGAACAGATGAAGGCAGTCAATCTAACAAAATAAATATAATAGACGCATCCTTAATTTCCAACAAAAACATACAAGTTCTCTCTGATCAAGAGATTATAGCACAAGACGAATCAGGCGCAATGGTTAAGCTAATTCACATGAGACTGGAGAATGGTGAAAGCAGTTGGGTGGCGCTTAATACTTAA
Protein Sequence: GAFLKSQSGEMYRVESVATVKDTTQGDSSQYIVKKVGKKFKCLLCENIKNRKTGTLTFSGDAATVVNHVREVHKARVYICSKCGLIMRKCSDYSAHLQVHRKALPTGKHETEKYKLYECDLCSKKFMSRNILIEHLNVHNRMRPYACDKCDKTFASKYTLKVHMKIHLDRLRPYKCVTCAKAFFTQQNLSQHEKTHSSVKDFVCKICSKTFVSQHNLEMHALVHTRVKAYTCEFCDKSFARRAEIRDHRRTHTGEKPFPCDICGMRFAQRSNLLSHRRATHFDDRRYPCQLCNKRFKRRRLLDYHVQAVHTGERPFQCDKCKSNFVYPEHYRKHMRIHTGERPYECGMCPKAFNTLDTRNKHRFTHTQCKPYQCGVCCAGFMRKPQLIAHVDHLRHDFKPMILNPTPRLSEDNTLIQPEEKDQKKLYIRRKIFKTLEEQEDSEKESDEYDPVYTVSFETPLSNVATELFDPDSVRTDEGSQSNKINIIDASLISNKNIQVLSDQEIIAQDESGAMVKLIHMRLENGESSWVALNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -