Mlae032355.1
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- ZNF296
- Assembly
- GCA_947458855.1
- Location
- OX375846.1:7413692-7430706[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.34 30 6.4 0.0 3 23 131 151 129 151 0.91 2 15 0.0075 0.65 11.6 1.9 1 23 226 248 226 248 0.98 3 15 3.2e-05 0.0028 19.1 0.1 1 23 254 276 254 276 0.99 4 15 0.0062 0.54 11.9 5.0 1 23 281 304 281 304 0.94 5 15 2.2e-05 0.0019 19.6 2.0 1 23 483 505 483 505 0.99 6 15 2.2e-05 0.0019 19.6 0.9 1 23 511 533 511 533 0.95 7 15 0.4 35 6.2 5.9 1 23 596 618 596 618 0.96 8 15 1.8 1.6e+02 4.1 0.0 3 20 627 644 626 644 0.95 9 15 7.9e-05 0.0069 17.9 1.8 1 23 653 675 653 675 0.98 10 15 7.9e-05 0.0069 17.9 2.5 1 23 681 703 681 703 0.98 11 15 0.0046 0.4 12.3 2.1 1 23 712 734 712 734 0.98 12 15 0.0001 0.0087 17.6 0.7 3 23 783 803 782 803 0.98 13 15 0.0096 0.83 11.3 5.5 1 23 824 846 824 846 0.97 14 15 1.6e-06 0.00014 23.2 0.6 1 23 852 874 852 874 0.98 15 15 0.00027 0.023 16.2 5.4 1 23 880 903 880 903 0.98
Sequence Information
- Coding Sequence
- ATGGCAGAAACTACAGTACCAGTTATACATTATTCAAATGTTAATAATATTACCAAGAACATTGAACCAGAAATAAATACTGTTAATAATAAAGACTATCTGAATACAACAACAATGGCAGAAACAACATTACCTAACCTAATTACACATTTTTCAAATGTTAACAATATTACTGAAAATATTGAATCGGAAATAATTCCTGTTAATAATAATTTAGTTAATAGTATACAAGAATTATCTACAAATACTCCAGATGAAAGTATAAATGATTCTAATGAATCTAATTCACAATCCGAGTTAACTGAAGAGTTAAAAAATGAAATTCTTACCAACATAGAAAAGATTTTACCTATGTCAATGGTACCAACTGGACAATTCCCTTTTTATGGCTGTGCTTTATGTAACATTTCCTTTATAGAACTTTCTGAATTAGATAAACATGTAGTAGGCCATCAAAACAGAATCACTAGTTGGGACTTACGTGTAGAATCTTTTAAAAAGAAAAAGAAACTTAAAAAGCTGAAGAAATTAAAATTAAAGGATGTCAAAGATGAAACTACTGAAAAAATAAAAGATAAAGAATGTATCACTAAAGCGGAAAAGGATACTATTGTAAAAACTGAAAAGAAGGAATCCATTGCCAAAACGGAAGAGGAGAAATGTCTAGAAAAGATTTTTAAATGTGCAGCTTGTTTTAAACAATTTTCTTTGAGCTACTATTTAAAGCTGCATGTGAGATCACATACAGGAGAGAAACCCTACCAATGTGCGCAATGTGGAGTGGCATTTATAACAGCAAGTAAACTGGGGAGGCATAGACGAATGCATGCTGTATCAAAGTTTGAATGTCGGATTTGTCACAAGTTGTTTAGTAGATTTGACAGTTTGACTAAACATTTTGATAAAAAACATTTGGATGAAAGATTGGAAGGAGAACCTTATGATTACAATGAAATACTACCATACCTAAAGGACTTTCAGGACGATCTATTCAAACAAGATATTACAGAACCAAAAACAGAACAACTTAACATGGATCTTAAAACCGAAATTGAAAATGATCTATTTGAACCTCAAATCAAAACAGAGGTGGTTGAAGTTAATTTATTATTGAAAAATGAACCAAATCCTATTAAAAATGATGATATTGATAATAATAGTAAAGAATGTGATGGTGTTGGTGATATTGGTGATTCTAGTTTCGATTTAGATAATGGTGGTGGCGATGATGATGATGAAAAATTATTTGATAGTGATAAAGTTAAAAAGGAAAGTGTATGGGACAATGAAGATTATTTCCCAATAGACGCGTGGACTACACCTTGTATGGAAATGCAGGATGCTCCCGATCCAGAACCCAAGGAGCGGAAGAAAAGAAAGAGGAAAATTAAATCAGAAATTGATAATAATGACGAAAATTCAATGGAGCAAGAAAAAAATGATCCTTTCCAATGTGAGATATGTAAAAAGAAGATAAAGACCCCAGGATACCTACATATTCACATGCGCACGCACACGGGGGAGAAACCCTTCCTTTGTTACATATGTAACAAGGGATTTATTACTTCCAGCAAGCTAAATAGACACGTACTTACACATTTAGAAGATGATGACACTAAGACTGATTTAGATGATGGAGTTGATGTTAAATCCGAGGCAGATGAATCTAACGATAAACGGAATGAGAAAGAAAAGAAAAAAAGAAAAAAGCTTAAACTCTCAAAGAAATATTTAAAATCGTACATGAAACTAGACCCTTCCCCTAGCACGACCAGAAAACGAAATTACGCTTGTGAATTTTGCAACAAAAAGTTTTTGCATCTCGACACTCTTAATGCCCATCTTCACCATCACCAAGGCGAGACCAAAATAAATTCTTGTTTCTATTGCCTGGCAGAGTTTGATACTGAGGAGTTGTTGAATGCTCACATACCTTGCCATATAGGTTCTACTCCATTTATATGCACTATATGTGGTAAAAATTATAAGCGGAGAGAAACCATGGTGTACCATAGACGTACGCATGGTATGGAAAAGAAGTTCCAGTGTGATGTATGTTCCAAGACGTTTACGGCCCCGTGCAAGCTGCAGAGACATCTGATGAGCCATAGACCTGGGAAGTTTGTAGTGAGATATGAATGTCCAGTCTGTGCTCATATATTTAATACTAAGTATCATATTGAAATGCACTTGACTACGCACGAAAAGGATGGATTAATTCAAAAAGAAAACCGCGGAGAGATCCTAGCAATGGTACAGCAGAATGCAAGAAAGATACCCGTCCAACCTGAGGGCTCCCTAACTGCTATAAAAGACCTGGTACCCACAGACGAGAGGTCTCGCATCTGCAACATATGTGGGGAGATATTCAATCACTTCTATTATCTGGAAGAACATTTAAAGACTCATGGGACGAGGATCAGTGAAAACGATGTCAAGAAATCTAAGTTGGAGGACGCTGAACGAAGATATAAGTGCAAGGTATGCAATAAGGGATTCAAACTGCACTACTACCTAAAGCTACACAACTACACACACACAAAAGAAAAGCCATTTATTTGCCAACAATGTGGCAAAGGCTTTATTACAAAGGGGAAATTAAAAAGACACATAGAAACCCATACAGGCCTTAAAAAATATCAATGTCATATTTGTTGTAAATTTTTCACTCGTCCAAGCTATTTAAGAATACATGTTAAAACTATACATGGTGTCGCTAAAGATGGGCTCACCCCGGGGCACCGCTCCGGTCGAGGTCGCTCCGTCCAGTTCACGTCAAGTGGTATTACCCTCGCCGGGAGGGAGGCCACGGTGGTCTCCGCTAGCCCCAAGTGGAGGCAGTTGGTGTCCCAAACACCTTCTGGACATCCAGTCCAAATCCACCCGTACGAGGATATCGTTCCCCCAGCCTCCTCGTCCTCTCCGGATGACTATAACGAACCGGGTATCATGGCAACCCAACTTTTCAGTGAGTCAACATGGTATCAGGACTTACCGTCGACGCAGCCTCAGCGCCCGGCGAAACATCGCAGAAGCTCCAGCGGTTATAGCCTGCCTCCTGCACAAAAGCCGGATTTAAGGCCGTCCCCATCAGCGTCCAACGTGTCGCCTATTCCAGCCTCGCAGACATCGCCGTATACGAAATCGGCATCTACCAGCCCACAGGCTGCAGGGACACCCGACTTGTTGCCAATCAACAACGGGAGGTCGCCATGCAGGCTGCGGACCGTCCACTTTCGGGCCCTAAGGGCCATCTTAGGGCACCCACCAAATGCCCGCCCCCTTGGCAGGGGCGTTAGATTCCTGCCTACAACTATAAACGAGTTCCGCGCGGTACAAAAGTACCTCGCCGAAGCACGCGAAAAAGATCCCCAGATCATAGGCCACACATACACCATTCCTCAGGAGCGCCCCCAAAAGGTGACAATCAGGGGCCTCGTGGTGGAGACCCCACTAGCCGAGATCATAGAAGAGCTTGAGGCTGTGGTTGGGGTTAGACCCGACCACGTAAAATTAATTCCGTCACGAAAAATACGCCCTGGGGCTGTCTTTTTCACTCAATTTCCCCATCTAGACACCAGCCAACAGAGGAGCCTTTTCGACCTCCAAGTGCTCCTCAGTATGCCCCGAGTGACGGTGCACACTGTGGGTCCGTGA
- Protein Sequence
- MAETTVPVIHYSNVNNITKNIEPEINTVNNKDYLNTTTMAETTLPNLITHFSNVNNITENIESEIIPVNNNLVNSIQELSTNTPDESINDSNESNSQSELTEELKNEILTNIEKILPMSMVPTGQFPFYGCALCNISFIELSELDKHVVGHQNRITSWDLRVESFKKKKKLKKLKKLKLKDVKDETTEKIKDKECITKAEKDTIVKTEKKESIAKTEEEKCLEKIFKCAACFKQFSLSYYLKLHVRSHTGEKPYQCAQCGVAFITASKLGRHRRMHAVSKFECRICHKLFSRFDSLTKHFDKKHLDERLEGEPYDYNEILPYLKDFQDDLFKQDITEPKTEQLNMDLKTEIENDLFEPQIKTEVVEVNLLLKNEPNPIKNDDIDNNSKECDGVGDIGDSSFDLDNGGGDDDDEKLFDSDKVKKESVWDNEDYFPIDAWTTPCMEMQDAPDPEPKERKKRKRKIKSEIDNNDENSMEQEKNDPFQCEICKKKIKTPGYLHIHMRTHTGEKPFLCYICNKGFITSSKLNRHVLTHLEDDDTKTDLDDGVDVKSEADESNDKRNEKEKKKRKKLKLSKKYLKSYMKLDPSPSTTRKRNYACEFCNKKFLHLDTLNAHLHHHQGETKINSCFYCLAEFDTEELLNAHIPCHIGSTPFICTICGKNYKRRETMVYHRRTHGMEKKFQCDVCSKTFTAPCKLQRHLMSHRPGKFVVRYECPVCAHIFNTKYHIEMHLTTHEKDGLIQKENRGEILAMVQQNARKIPVQPEGSLTAIKDLVPTDERSRICNICGEIFNHFYYLEEHLKTHGTRISENDVKKSKLEDAERRYKCKVCNKGFKLHYYLKLHNYTHTKEKPFICQQCGKGFITKGKLKRHIETHTGLKKYQCHICCKFFTRPSYLRIHVKTIHGVAKDGLTPGHRSGRGRSVQFTSSGITLAGREATVVSASPKWRQLVSQTPSGHPVQIHPYEDIVPPASSSSPDDYNEPGIMATQLFSESTWYQDLPSTQPQRPAKHRRSSSGYSLPPAQKPDLRPSPSASNVSPIPASQTSPYTKSASTSPQAAGTPDLLPINNGRSPCRLRTVHFRALRAILGHPPNARPLGRGVRFLPTTINEFRAVQKYLAEAREKDPQIIGHTYTIPQERPQKVTIRGLVVETPLAEIIEELEAVVGVRPDHVKLIPSRKIRPGAVFFTQFPHLDTSQQRSLFDLQVLLSMPRVTVHTVGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -