Mlae032022.1
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- ECU03_0790
- Assembly
- GCA_947458855.1
- Location
- OX375846.1:3046343-3050652[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.067 5.8 8.7 0.5 1 23 137 160 137 160 0.96 2 17 0.12 10 7.9 1.9 2 23 185 207 184 207 0.94 3 17 0.25 22 6.9 0.1 1 23 229 251 229 251 0.97 4 17 0.00047 0.041 15.4 0.2 1 23 255 277 255 277 0.98 5 17 0.00035 0.03 15.9 1.1 1 23 282 305 282 305 0.96 6 17 0.017 1.5 10.5 0.3 2 23 312 334 312 334 0.92 7 17 0.078 6.8 8.4 6.4 1 23 341 364 341 364 0.96 8 17 0.00038 0.033 15.7 2.5 2 23 371 392 370 392 0.96 9 17 4.3 3.8e+02 3.0 0.1 2 23 601 623 600 623 0.92 10 17 0.016 1.4 10.6 0.6 1 23 645 667 645 667 0.97 11 17 7e-05 0.0061 18.0 0.3 1 23 671 693 671 693 0.99 12 17 0.00032 0.028 16.0 0.2 1 23 698 721 698 721 0.95 13 17 7.2e-05 0.0062 18.0 0.5 2 23 728 750 728 750 0.97 14 17 0.00028 0.024 16.2 0.8 2 23 758 780 757 780 0.96 15 17 0.00043 0.037 15.6 0.6 1 23 786 808 786 808 0.97 16 17 2.1e-07 1.8e-05 26.0 0.7 1 23 814 836 814 836 0.99 17 17 0.0013 0.11 14.1 0.3 2 23 842 864 841 864 0.93
Sequence Information
- Coding Sequence
- ATGGAAAGCAACGATAAGGTCGAATGTGGAGCACGCATACTCTGGAACGAATCGAGCCCCACGACGTCTATCAAGATCACGCCGCTGTTCCAAGTGGCTTACGACAGAACCCTATGTCGCCCTCTAGGCACTGTGCTGAATTTTGAATCACTCAAATTATTTAAAACCCAAAAGAAAAAGTACATACCCGATGATTCTGACCTGTATTCTCCGCCCAGGGATTTTTCTCCGTCACGAGAACCGTCTCCGGTTTCAATGCCACCTTCTCCTCGAATAGTAGAGAAAGTTCAAAATGTTGTTGTCGTTAGAAGTAAACCGCAAACAACAAAGCAACCTAATGTCAGACAGAATGCTTTAATAATCTTCGAATTTTCGACCGTGTACCCTTTCATATATGGAAACAATAAATTTAAATGCTTTGTATGTTCACAACCTTTCTTAGAGACCTCGTTGCTGAAAGTTCATATGAACGAAAATCACACGTTCGCACCTCTAAAACGACTAGTTAATAATAAAAGAGAAAATGTACTTAAAGTTGATGCAAGTTCTATAGTTTGTAAGATCTGTTCGCATACAATAGATAGTTTGTGCAATCTTAAGTTACATTTAAGAGATGTTCACGGTAAGCTTATAGATCCAGATTTGCAAGACAATGTGATTCCTTTCAAGCTTGATGAGACAGTTTTCAAGTGTGTAATGTGCTCCGAGGTGTTTCTTAAAGTTCGCCTTTTAGTGATACATATGAGTGTTCATTTTAACAATTACAGTTGTGATATCTGTGGGTCAGGTTTCATGACTCTTCGATTACTAAAAAAACATTTGGAAGTTCACGAGAACGGAAACTTTCCATGTGATCGTTGTGATAAAATTTTTAATACTACCCACAAGTTGTCGCTACACATCAGAGGGGTCCATTTAAAACAGTATCCGAGAAGATGCCCTATCTGCCCGGAAAGATTCAATTCCAATTATAGAAGAACTATTCATCTTCAAGATGTCCACAATCAGTCGACCCGAGTTCACAAATGCGAGACTTGTGGCCGAGGCTTTAACTTGAAATATCATCTAATTTGTCACACGCGGTCTGTGCACTTACAGGAACGGAATCAGCAGTGTGATGTGTGCCTTCAAAGATTTTGTAATAAAGAAACTttgaagcgacacatggttatacacaccgGCATTCTTGAAGAAAGTGATTCAACAATTGCTATTAAAGATGACGATGGGATTGATATTAAACTGAAGCTCTTAAAGACCCCAATTGATTTAGACAAACTTATTTGTATTAAAGAAGAAATTAAGACCATTAAGAAAATATTTCCAAAAAACAGAAAAATGAAGAAATATGTTCCGGCAGTTTCAGTTAAAAAAGAAGATATAGTTAATACTAATAAACTTGAAGATAATAAATACTATTTAACTGTATTAAAAGAACCTATAGCTTTAGATGATATCGAATGGAGTGGTGATGATTTAACAAATTCAGATAAAAAGTCTGTTACATTTAACGTAAAAACAGTTCAAAAAGCATATTTCAACACATCTCCTCGAAAAAGATTCAGTGCTATAGAAAATCAAATGTGGAAACGAAACGCTTTTACATTATTTGAATGCAGTTTTGTATATCCATTTATTTATGGTAGTAACAAGTTTAAATGTTTTGTTTGTTCAATGCCTTTTCTAGATGCCAATATTTTGAAACATCACACCGTTCAAATGCATTCTATAGAAGATTTTGGACGAGAATTAAACAGTAGTGGTCTTGACAACAATTTAAAAGTAGATGTCAGTTGTTTAACTTGCAAAATCTGCATGTATAATGCTATTAATCTTCAAGCTTTAAAGGAACATTTGAAAGAAGCTCATAGTAAAGACATAGACCCTGACTATCAAGATAGCATAATACCTTTTAAATTAGGCGGAAATACTTTTGAATGCCAAATATGCCACGAAAGTTTTCTTAAAATTAGACTTCTTATAATTCATATGAGTGTACATTATAACAACTACAGCTGTGAAGTTTGTGGTTCAGTGTATATTTCTTTAAAATTATTGAAGAGACATTTGCAAACGCATCAAAATGGAAATTTTCCATGTGATAAATGTGATAAAGTGTTCAATAATGCTGCTAAAAGATCTATTCATATGAAGGGTGTGCACTTAAAGCAATTTCCGAGACGATGCCCAATTTGTCCAGAGAGATTTAATTCGAATTATCAAAGAACTAAACATTTGAGGATAGTTCATAATCAAAGTTCTGGTTTATTGCGTTGTGAAACATGCGGGAGAGAGTATGATTTAAAATCCCATCTTCTTCTCCACATAAGATCTGTGCATTTACAAGAGAGAAATCACGAATGTGGTGTTTGTCAAGCCCGTTTCTTTAACAAAGATCTTTtaaatagacacttggccattcacacgggggaaaagaattttaaatgcgatgtttgtggaaaaggatacgccaggagaaaaaatctgcaagatcatttgcggactcatgataaTTTAGCGATGAGTTGCACCATTTGTGGGCTTAATTTCTTTGATCATTCTTCCTTAGTTGCACATTTAAGTTTAGCACATACTGTTATTTAA
- Protein Sequence
- MESNDKVECGARILWNESSPTTSIKITPLFQVAYDRTLCRPLGTVLNFESLKLFKTQKKKYIPDDSDLYSPPRDFSPSREPSPVSMPPSPRIVEKVQNVVVVRSKPQTTKQPNVRQNALIIFEFSTVYPFIYGNNKFKCFVCSQPFLETSLLKVHMNENHTFAPLKRLVNNKRENVLKVDASSIVCKICSHTIDSLCNLKLHLRDVHGKLIDPDLQDNVIPFKLDETVFKCVMCSEVFLKVRLLVIHMSVHFNNYSCDICGSGFMTLRLLKKHLEVHENGNFPCDRCDKIFNTTHKLSLHIRGVHLKQYPRRCPICPERFNSNYRRTIHLQDVHNQSTRVHKCETCGRGFNLKYHLICHTRSVHLQERNQQCDVCLQRFCNKETLKRHMVIHTGILEESDSTIAIKDDDGIDIKLKLLKTPIDLDKLICIKEEIKTIKKIFPKNRKMKKYVPAVSVKKEDIVNTNKLEDNKYYLTVLKEPIALDDIEWSGDDLTNSDKKSVTFNVKTVQKAYFNTSPRKRFSAIENQMWKRNAFTLFECSFVYPFIYGSNKFKCFVCSMPFLDANILKHHTVQMHSIEDFGRELNSSGLDNNLKVDVSCLTCKICMYNAINLQALKEHLKEAHSKDIDPDYQDSIIPFKLGGNTFECQICHESFLKIRLLIIHMSVHYNNYSCEVCGSVYISLKLLKRHLQTHQNGNFPCDKCDKVFNNAAKRSIHMKGVHLKQFPRRCPICPERFNSNYQRTKHLRIVHNQSSGLLRCETCGREYDLKSHLLLHIRSVHLQERNHECGVCQARFFNKDLLNRHLAIHTGEKNFKCDVCGKGYARRKNLQDHLRTHDNLAMSCTICGLNFFDHSSLVAHLSLAHTVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -