Mlae006156.1
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- zfy1
- Assembly
- GCA_947458855.1
- Location
- OX375842.1:27749524-27755572[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.19 16 7.3 2.4 1 23 40 63 40 63 0.91 2 19 0.00087 0.076 14.6 3.4 2 23 72 93 71 93 0.97 3 19 7 6.1e+02 2.3 6.9 1 23 97 120 97 120 0.96 4 19 0.33 29 6.5 6.1 1 23 124 147 124 147 0.95 5 19 0.0035 0.31 12.7 1.4 3 23 152 173 150 173 0.96 6 19 0.026 2.2 10.0 1.4 2 23 177 199 177 199 0.95 7 19 0.00035 0.031 15.8 0.6 3 22 209 228 208 232 0.93 8 19 0.00014 0.012 17.1 1.7 3 22 267 286 266 290 0.93 9 19 0.00014 0.012 17.1 1.7 3 22 309 328 308 332 0.93 10 19 0.00014 0.012 17.1 1.7 3 22 351 370 350 374 0.93 11 19 0.00014 0.012 17.1 1.7 3 22 393 412 392 416 0.93 12 19 0.00014 0.012 17.1 1.7 3 22 435 454 434 458 0.93 13 19 0.00014 0.012 17.1 1.7 3 22 477 496 476 500 0.93 14 19 0.00014 0.012 17.1 1.7 3 22 519 538 518 542 0.93 15 19 0.00014 0.012 17.1 1.7 3 22 561 580 560 584 0.93 16 19 5e-06 0.00044 21.6 0.4 2 23 593 615 592 615 0.95 17 19 0.0034 0.3 12.7 3.6 1 23 621 644 621 644 0.94 18 19 6.7e-06 0.00058 21.3 1.2 2 23 654 675 653 675 0.97 19 19 0.0045 0.39 12.3 0.6 1 23 681 704 681 704 0.93
Sequence Information
- Coding Sequence
- ATGGATCCAATATCAGACATTAGTAAATGTTATAGCACTATAAAAGTTGATATTGCTAATGAATTGAAAGGAGTAATAGAAAATGATAAGAATTATATGATAAATTTAAAAAATATTTTTTTATGTGAGTTTTGCCTAAAAGGTTTTAACAAAATTGAACATCTGGAAAAACATAATAATAATTATCATACTAAATTAGACAATAAGAAAATTATGTGTAATATGTGCCAATGTTTTTTTTCTACCAAACCTGACTTAGAAAAACACTTTAAAACTCATAATTTTATTCATAAATGTAATTTATGTAGTTTTACTTGTGTCAAAAGGTGGATGGTTAAAGATCACATAAAACATAGTCATTGCAAGTTATATTATTGCAAACTGTGCAGACACGGTTACAGTGACTGTAAGGACTTCAACAATCACTACAAGGCGTTGCATACACATTTGGATTGTGACTACTGTGGAAAAAGATTTTTAAAGAAAAATAGTATCCGGAGTCATATTAGACGCAACCACATTCCTCCCGAGTGTACCGCTTGTGGTCTGAGCTACCGAACTTACCACTCGCTGGATAACCACAACCGTCGCGTGCACCCGCGGCCGGCCGCCGACACCGCTTACTGTGTGGAGTGCGATAAGCAGTTCTCCAGTGACTATAACTACAGGAACCACTTGCGCACCGGCGTGAGACACGTGACGCCCCACAGACTGCGGAACCACTTGCGCACCGGCGTGAGACACGTGACGCCCCACAGACTGCGGTATGTAACATCTCCCACTACCGACGCCGCCTACTGTGTGGAGTGTGACAAGCAGTTCTCCAGCCACTATAACTACAGGAACCACTTGCGCACCGGCGTGAGACACGTGACGCCCCACAGACTGCGGTATGTAACATCTCCCGCTACAGACGCCGCCTACTGTGTGGAGTGTGACAAGCAGTTCTCTAGCCACTATAACTACAGGAACCACTTGCGCACCGGCGTGAGACACGTGACGCCCCACAGACTGCGGTATGTAACATCTCCCGCTACCGACGCCGCCTACTGTGTGGAGTGTGACAAGCAGTTCTCCAGCCACTATAACTACAGGAACCACTTGCGCACCGGCGTGAGACACGTGACGCCCCACAGACTGCGGTATGTAACATCTCCCGCTACAGACGCCGCCTACTGTGTGGAGTGTGACAAGCAGTTCTCTAGCCACTATAACTACAGGAACCACTTGCGCACCGGCGTGAGACACGTGACGCCCCACAGACTGCGGTATGTAACATCTCCCGCTACAGACGCCGCCTACTGTGTGGAGTGTGACAAGCAGTTCTCCAGCCACTATAACTACAGGAACCACTTGCGCACCGGCGTGAGACACGTGACGCCCCACAGACTGCGGTATGTAACATCTCCCGCTACCGACGCCGCCTACTGTGTGGAGTGTGACAAGCAGTTCTCCAGCCACTATAACTACAGGAACCACTTGCGCACCGGCGTGAGACACGTGACGACCCACAGACTGCGGTATGTAACATCTCCCGCTACAGACGCCGCCTACTGTGTGGAGTGTGACAAGCAGTTCTCTAGCCACTATAACTACAGGAACCACTTGCGCACCGGCGTGAGACACGTGACGCCCCACAGACTGCGGTATGTAACATCTCCCGCTACAGACGCCGCCTACTGTGTGGAGTGTGACAAGCAGTTCTCTAGCCACTATAACTACAGGAACCACTTGCGCACCGGCGTGAGACACGTGACGCCCCACAGACTGCGAGTCTCATGCCCGGAATGCGACAAAGTGTTCTCACGTCGCACCTACATGAACAATCACTACAGACTCGCGCACGCGCACACGTCTAAACATCACTGCGGCGTGTGCAATAAATATTTCGTGACCGCGTTCAGTTTGCGTCAGCACACGAAGCTGGTCCACGACAAGATCGCTCTCCCCAAAAATAAAGTGTGCAAACTGTGCGGCAAAGCATTTAGTACGAATCGGACCCTGAGCTACCACGTCCGCACGCACACGGGGGTGCGGCCGTACCTCTGCGATTATTGCCCGTCGAGCTTTTCCCAAAAAAAATCCGTATACTCCCATCTGAAGGCCGTGCACTCAATGGTGGCTGAAGAGGCCAATGAACGCCGTTCACTTAGTGGTGGCTGA
- Protein Sequence
- MDPISDISKCYSTIKVDIANELKGVIENDKNYMINLKNIFLCEFCLKGFNKIEHLEKHNNNYHTKLDNKKIMCNMCQCFFSTKPDLEKHFKTHNFIHKCNLCSFTCVKRWMVKDHIKHSHCKLYYCKLCRHGYSDCKDFNNHYKALHTHLDCDYCGKRFLKKNSIRSHIRRNHIPPECTACGLSYRTYHSLDNHNRRVHPRPAADTAYCVECDKQFSSDYNYRNHLRTGVRHVTPHRLRNHLRTGVRHVTPHRLRYVTSPTTDAAYCVECDKQFSSHYNYRNHLRTGVRHVTPHRLRYVTSPATDAAYCVECDKQFSSHYNYRNHLRTGVRHVTPHRLRYVTSPATDAAYCVECDKQFSSHYNYRNHLRTGVRHVTPHRLRYVTSPATDAAYCVECDKQFSSHYNYRNHLRTGVRHVTPHRLRYVTSPATDAAYCVECDKQFSSHYNYRNHLRTGVRHVTPHRLRYVTSPATDAAYCVECDKQFSSHYNYRNHLRTGVRHVTTHRLRYVTSPATDAAYCVECDKQFSSHYNYRNHLRTGVRHVTPHRLRYVTSPATDAAYCVECDKQFSSHYNYRNHLRTGVRHVTPHRLRVSCPECDKVFSRRTYMNNHYRLAHAHTSKHHCGVCNKYFVTAFSLRQHTKLVHDKIALPKNKVCKLCGKAFSTNRTLSYHVRTHTGVRPYLCDYCPSSFSQKKSVYSHLKAVHSMVAEEANERRSLSGG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -