Basic Information

Insect: Monopis laevigella
Gene Symbol: -
Assembly: GCA_947458855.1
Location: OX375845.1:11617863-11627747[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00026 0.023 16.2 0.6 1 23 144 166 144 166 0.99

2 12 0.0035 0.3 12.7 1.1 2 23 176 197 175 197 0.96

3 12 3.3e-05 0.0029 19.0 2.0 1 23 210 232 210 232 0.98

4 12 1.2e-06 0.0001 23.6 3.1 1 23 240 262 240 262 0.98

5 12 7.9e-05 0.0069 17.9 2.3 1 23 268 290 268 290 0.97

6 12 7.7e-05 0.0067 17.9 4.5 2 23 297 318 297 318 0.98

7 12 4.9e-08 4.3e-06 28.0 1.2 1 23 324 346 324 346 0.95

8 12 5.7e-05 0.005 18.3 3.4 1 23 352 374 352 374 0.98

9 12 0.00011 0.0097 17.4 0.1 1 23 380 402 380 402 0.96

10 12 1.3e-05 0.0011 20.3 1.3 1 23 408 430 408 430 0.97

11 12 8e-08 7e-06 27.3 0.7 1 23 436 458 436 458 0.99

12 12 0.0012 0.1 14.2 1.1 1 20 464 483 464 486 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00026	0.023	16.2	0.6	1	23	144	166	144	166	0.99
2	12	0.0035	0.3	12.7	1.1	2	23	176	197	175	197	0.96
3	12	3.3e-05	0.0029	19.0	2.0	1	23	210	232	210	232	0.98
4	12	1.2e-06	0.0001	23.6	3.1	1	23	240	262	240	262	0.98
5	12	7.9e-05	0.0069	17.9	2.3	1	23	268	290	268	290	0.97
6	12	7.7e-05	0.0067	17.9	4.5	2	23	297	318	297	318	0.98
7	12	4.9e-08	4.3e-06	28.0	1.2	1	23	324	346	324	346	0.95
8	12	5.7e-05	0.005	18.3	3.4	1	23	352	374	352	374	0.98
9	12	0.00011	0.0097	17.4	0.1	1	23	380	402	380	402	0.96
10	12	1.3e-05	0.0011	20.3	1.3	1	23	408	430	408	430	0.97
11	12	8e-08	7e-06	27.3	0.7	1	23	436	458	436	458	0.99
12	12	0.0012	0.1	14.2	1.1	1	20	464	483	464	486	0.95

Sequence Information

Coding Sequence: ATGGCAAATTCATTATCTTGTATTTGTCGTACATGTTTAAAAGAAAGCACTAACCTTGTAAACCTTAAAAATCCTATTGCTATTCTGAAAGAAGAAAATGTATTGCTAATCGATGCTTTGAGGATTTGTTCATTATCTCAGATTTCTATATCAAATAACTTGCCAAACAAAATATGTGAAGAATGTAGAAATCTATTAGAAATTGCTTATTCTTTTTATCGGTTAGTGTCACATGCTGAGGAGGAACTTAAAAGAAGATTGGATTCTCAACCTATATCTGATCATTTTGATGATTTTGATTCAAAAGCAGATACCCTGAGTGAATGTTTGAATTATGATTTTGAATCAGAAGCGATAAAGGTGGAACTTAAAACTGAAATAGATATAGATATAGATGCAAACTCAATTAAGACTGAAAAAACTGAAATATATGAATGTGATAAATGCCAAAAGATTTACAATAATGTTGACACTTTCATTGAACATTTACAAACTCATGAATCACTAAAATTTACAACAAAAAAAAAATGTGATTTATGTAATATCAAATTTAAAAAGGAATCTAAATTTCTGGAGCATATGGCTTGGCACAATGAAAGTGTGGTACTTACAGATGCAAATGGTTGTTATAATTGTAGCATTTGTTCAATGACATTTACCAAGTCTCGTGCGTTAAGTAGTCATATGAAAAAGCATAAAAGTGTTAAACCAGAAAATTATAAATGTGAGACTTGCAATAAAGAGTTTAAGAAGAAATATGGCTTAAAACGGCATATGATGTTACATTCCAAGGATCATGAATACCATTGTTCTCAATGTACAAAGTCATACTCGAGGCTAGATCAGTTAATTAATCATGTCAACTTGCATAATGGAACTAAACCTAATACTTGTGGGTTTTGTAATAAAACATTCAACCAATTGTGCAATCTAAAAGACCATTTGCGGACTCATACAAAGGAGACCCCTTTCCTTTGTTCGGACTGCGGTAAGGGATTCACAAACAGATCCAATCTGCGGCAGCATATGTTACGTCATAGTGGAGTCAAACCATTTTCTTGTACACTTTGTCCCAAGAAATTTTGTACTAAAGGTACAATGAAAACGCATATAGCAACTCATACGGGTGCTCATCCGTATAAATGTGAAATCTGCGGTGCAGGATTTACTGCCCTTAGTTCTTTAAGGAAACATAACATTATACATCTAGGAATCAAACCGTTTGCCTGCGACGTCTGCGCCATGAAATTTTCAAACAAAGACCACTTAAAGAGACATGCGCGCATCCACACTGGAGAAAAACCTTATCAATGTAAAGAATGCGACCGAGCGTTCGCCCAAAGCAACGACCTCATCAAGCACATGAGGTACCATGTTGGGCAGAATGTTTATCCGTGCAGTGTCTGCTTCAAAAGATTCAGGTTAAAAAGTGAATTGAAGTTGCACTATCCAGAACACTACGCGAACTCTGATTCAGCAAATCTATTACTCCTAGATAACATTATATCTGGCAACAAAAATAAACAAGACACAATAAAACCAAATATTATAGAAGACAATAGCCCATGTGATAACTCTGTAAACAACTTCTCAAATGATGATATGAGAACTGTTAATATTTCCTTTACTCCTAGTATGGTTGATAAAAATGGCGAATTTACAGGAATCAAACTCAAAGCTTTCAATCCAAAAACTTTTAAATGGCTAAGGTCCACCTTGGACCCTGTCCAGGTGTCATACCAGATACAGCTGTTGTGGGACAACAATTTTTCAAATAATAATCTTCCCAGAAAACGCTTACCTAGGCCTAACTCCAGCAACATGTAA
Protein Sequence: MANSLSCICRTCLKESTNLVNLKNPIAILKEENVLLIDALRICSLSQISISNNLPNKICEECRNLLEIAYSFYRLVSHAEEELKRRLDSQPISDHFDDFDSKADTLSECLNYDFESEAIKVELKTEIDIDIDANSIKTEKTEIYECDKCQKIYNNVDTFIEHLQTHESLKFTTKKKCDLCNIKFKKESKFLEHMAWHNESVVLTDANGCYNCSICSMTFTKSRALSSHMKKHKSVKPENYKCETCNKEFKKKYGLKRHMMLHSKDHEYHCSQCTKSYSRLDQLINHVNLHNGTKPNTCGFCNKTFNQLCNLKDHLRTHTKETPFLCSDCGKGFTNRSNLRQHMLRHSGVKPFSCTLCPKKFCTKGTMKTHIATHTGAHPYKCEICGAGFTALSSLRKHNIIHLGIKPFACDVCAMKFSNKDHLKRHARIHTGEKPYQCKECDRAFAQSNDLIKHMRYHVGQNVYPCSVCFKRFRLKSELKLHYPEHYANSDSANLLLLDNIISGNKNKQDTIKPNIIEDNSPCDNSVNNFSNDDMRTVNISFTPSMVDKNGEFTGIKLKAFNPKTFKWLRSTLDPVQVSYQIQLLWDNNFSNNNLPRKRLPRPNSSNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -