Basic Information

Gene Symbol
rcor2
Assembly
GCA_947458855.1
Location
OX375845.1:14173148-14188089[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.6e-09 1.1e-05 26.5 0.0 3 46 132 175 130 175 0.96
2 2 6.9e-11 1.4e-07 32.6 0.0 3 46 394 437 392 437 0.96

Sequence Information

Coding Sequence
ATGGTTTTAGCCGAAAGAAATAGTGAAATTCGAAATGGTAAGCGGTCGAGAGGACCAAGCCCCAATGGACATGGAAGTCCTGACTCTAGCTCGGATGACGAGAACGTAGTACCATTTGCAGCGGAGAAAATAAGAGTAGGGCGGGACTATCAGGCAGTTTGCCCAGACCTAGAGGCAGTGGACCAGAGAAGACCAGAGCTCATAGCGGACAGGGCTTTGTTGGTATGGTCGCCAACAGCAGACATATCAGATGCTAAGTTGGATGAATACATAACAATAGCAAAAGAAAAATATGGCTATAATGGTGAACAAGCACTAGGTATGTTGTTTTGGCATAAACATGACCTGAACCGAGCCTCCATGGACCTGGCCAACTTTACACCTTTCCCAGATGAGTGGACAGTAGAGGACAAAGTGTTATTTGAACAGGCATTTCAGTTTCACGGAAAAAGTTTTCATAGGATACGACTTATGTTACCGGACAAATCAATAGCATCATTAGTTAAGTATTATTATTCATGGAAGAAGACGAGAGCCCGTGCTTCTCTCATGGACATGGTTGTAGACAATAAGAATGTGACAGGCACCACTACAGGGAAACGGGAGTCTGGGGCTTCAGAACCCGGTGGCTCTGACAAAGAATCTGATAATGATGACAAGAAATGGACGTTACATCGGGGAGTGGTCCGCGGTACCCCAGGCGCCGCTACCGTCTCATCATCCCCCGCTCAGGACGGAGCCAGTGGAGACGGCGGCAAGTGGTGCACTTTATGCGGGGTCCTGTGCAACTTCACCACCGCTCACCTGTCCCACAAACTGTGTCAGGCTTGCCTCGTGCACGCCAGACGTACGGGCTCTATGCGGCCACTATGCGGTCCCGCTGGACGGCGCGGGCCGGGGGGCAAGTCTCTTCGGTACAAACGCAAGTTGCCTCGAGGAATATACATCAATCATGACGACCTTGTTGCCATGGCGACGGGGCCTCAGCCCGGGGAAGCCCCGCAGCCTGGCTTGGTCAACCAGGGCGAAGTAATGCTCTCAGCAATGGACAGAGAAATTATATCGCTTAAGAGACAAGTACAACAAAATAAACAACAGTTAAGTGCTATTAAAAGAAAAGTGGGAGAGCCTGGAGTGGAAGACATGAGGCCCGGGGAACCTCCAGCGAAGATCAATTCTAGATGGACCAATGACGAGTTATTAATGGCAGTAACTGCTGTTAGAAAATATGGCAAAGACTTCCAAGCGATAGCTGAGACTTTAGGTACAAAAAGTGAAGCTCACGTCCGGACGTTCTTCGTGTCATATCGCCGGCGGTACAACCTGGATGCCGTACTACGTGAGCACGAAGCTGACCAGGCGCCTGGCACCACTAGGACTAGTGAAACTGCAGAGACGAGTGTAGAGAGCGCGCCTACCACCAACGGAGACACCGAGCCCGTCGTCACCACTAAAGACGAAAAGAGCATGGAGGTAGATAGCGAAGGAGTAGCTCTCGGGGCCCCGGCCGAGCAGGGCGGCGCGCCCACCACTCCGCCCAAACACAAACCGCCCAAGTGA
Protein Sequence
MVLAERNSEIRNGKRSRGPSPNGHGSPDSSSDDENVVPFAAEKIRVGRDYQAVCPDLEAVDQRRPELIADRALLVWSPTADISDAKLDEYITIAKEKYGYNGEQALGMLFWHKHDLNRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRLMLPDKSIASLVKYYYSWKKTRARASLMDMVVDNKNVTGTTTGKRESGASEPGGSDKESDNDDKKWTLHRGVVRGTPGAATVSSSPAQDGASGDGGKWCTLCGVLCNFTTAHLSHKLCQACLVHARRTGSMRPLCGPAGRRGPGGKSLRYKRKLPRGIYINHDDLVAMATGPQPGEAPQPGLVNQGEVMLSAMDREIISLKRQVQQNKQQLSAIKRKVGEPGVEDMRPGEPPAKINSRWTNDELLMAVTAVRKYGKDFQAIAETLGTKSEAHVRTFFVSYRRRYNLDAVLREHEADQAPGTTRTSETAETSVESAPTTNGDTEPVVTTKDEKSMEVDSEGVALGAPAEQGGAPTTPPKHKPPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01452275;
90% Identity
-
80% Identity
-