Mlae008278.1
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- -
- Assembly
- GCA_947458855.1
- Location
- OX375844.1:27118518-27120937[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9e-11 3e-08 34.4 0.0 3 42 14 53 12 56 0.86
Sequence Information
- Coding Sequence
- ATGACAACCATTAAGAAAAAGCGTAGTTCAAGGACTCAAAATGATATGGAAGCTGCTGTTAATGCTGTCCGGATAGGCATGCTGTCCAGTTATAAAGCAGCTGATACGTACAACattccaagaagaacactacgagattatttaaagagcgggatgcccaaattaagtttaggtagaagatcagttttttccaaagaagaagaaagtgacattgccaaaagaataattagatttgcagatttggggattcctttgaccccaaaaatgattcgaaaacaagtattcgtattttgtgagacattcaacatcaaaaataattttaataaacaatcaggtttagcaggacgagattggcttaagttatttttaaatagaaatctcaatatcgcgaagcgcaaagcgcagtttcttaatcaagcgagaggccagaaactaaataaggctatagtttcgaatcactttgctgaagtggcaaaattatataatgagcttgggatccattataatcctgagaggttatataatatggatgaaaaaggttgtcgattaaccttacataaacagccaacaataatagcacaaaaaggagcaaaaagggtacacatacaagcttcagaacatggcgaaaatgtgactattgtgggttgtgccaatgcatcgggaactcccattcctccaatggtgatttttaaaggagttcgacgaaaacaagagtttaaaaaatatttgcctccaggatcaattgttagaatggctccgaagggaagtatgaccacagaattattcatagaattcttaagacattttgccaaatataagacctcgggaaactgcctcctaatatttgatggagcaaagtgtcatttagactttagaattgctgaagaagccgataggcatggtatcactctatattgccttccctcaaacacgatccacgagttgcagccactagataaatcttgttataaacccttcgaaagttactgggatcaagaagtcatacaacattTTTATATAAACCATGCTCAAAAATTGTCTCGCTCTGATTTTAACAAGATTTTGTCAAAGATATGGTCTAGATGCATGAGTCACGATAACATTATTAGTGGTTTCCAAGCAACGGGGTTATATCCCTTTAATCCGGATATTTTGCCTGAAAATGCTTTTGCTCCTTCTTTGTTAACAGAAAAACAGGTCCGAAACTCAGATAATGGTAGATCTTGTGAGAATCTTCCATTGCGAGTCGACAATGAAGTGCAAGCTCAATATTTATCAGATACGTCTTCAACGGAAAACTTTGAAACTTTTCATTCTCCTACTCTCTCATCTACAAATGCTTCGGATAAAGAAGATAATTTTGAGCTTTCAGCATCAGAGTTGACTACAACGTACTCCGTACTTTTAAGTTGTGCTCCAGCCACATTGCATACTTATCCAAACAATAGACAGTTAACTCTGCCATACAAAAGCCACTGTAAACCTCAAAATTCTTCTCCAATTCCTTCAACAAGCGGTCTTCAAAGTAACAAGATACTTAAGTATTTTAGTTCCACTACAGACGTTTCTGTCGATGAAGATGCTTCTGACAATGAAATTATGTCAAGATTAATCAAAAGGCCAGGTATTCATAAATCTTTAAATATATATTCATCTGATTCTGGAGATACTGATGAAGAAGACAATGTACCACTAGCTCAGTTATCCATCAAATCACCATTTCAAATATTTATGCCCACACCGAACTATGCAATTACAAAGAATAAACCGCGCCGAAAGGCAATAAATTACAAAGGCCAGAGAATAACTAAAGCTTTATTTATAAACGTGAAAGAGGTTAAACAGAACGTAGATAGTAAGAATAAATCCAAAACAAAGAATAAACTAAAAGCAAATAAAGTAGAGACATACAAGAAAAGCGTAGATTGCAAATTTGACAAAGATGAAACTATAAGAAAAGAAAATGTAGACATAGGCAAAGAAAACAAAAATGATAAATGGTATTGCTACGCTTGTTATGAGGATCGTATAGCCGATATGAGATCATGTGTGAATTGCACGAAATGGTACCACGAGGAATATATTGGTTGGACCAAAAATGACGTAGAAGTATTTACGTGCCCTGATGGTTGTGACTAA
- Protein Sequence
- MTTIKKKRSSRTQNDMEAAVNAVRIGMLSSYKAADTYNIPRRTLRDYLKSGMPKLSLGRRSVFSKEEESDIAKRIIRFADLGIPLTPKMIRKQVFVFCETFNIKNNFNKQSGLAGRDWLKLFLNRNLNIAKRKAQFLNQARGQKLNKAIVSNHFAEVAKLYNELGIHYNPERLYNMDEKGCRLTLHKQPTIIAQKGAKRVHIQASEHGENVTIVGCANASGTPIPPMVIFKGVRRKQEFKKYLPPGSIVRMAPKGSMTTELFIEFLRHFAKYKTSGNCLLIFDGAKCHLDFRIAEEADRHGITLYCLPSNTIHELQPLDKSCYKPFESYWDQEVIQHFYINHAQKLSRSDFNKILSKIWSRCMSHDNIISGFQATGLYPFNPDILPENAFAPSLLTEKQVRNSDNGRSCENLPLRVDNEVQAQYLSDTSSTENFETFHSPTLSSTNASDKEDNFELSASELTTTYSVLLSCAPATLHTYPNNRQLTLPYKSHCKPQNSSPIPSTSGLQSNKILKYFSSTTDVSVDEDASDNEIMSRLIKRPGIHKSLNIYSSDSGDTDEEDNVPLAQLSIKSPFQIFMPTPNYAITKNKPRRKAINYKGQRITKALFINVKEVKQNVDSKNKSKTKNKLKANKVETYKKSVDCKFDKDETIRKENVDIGKENKNDKWYCYACYEDRIADMRSCVNCTKWYHEEYIGWTKNDVEVFTCPDGCD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01016546;
- 90% Identity
- iTF_01016542; iTF_01016546; iTF_01016544;
- 80% Identity
- iTF_01016542;