Mlae000084.1
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- -
- Assembly
- GCA_947458855.1
- Location
- OX375861.1:734132-735328[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 1.1 3.5e+02 2.1 0.0 22 37 3 18 1 26 0.73 2 10 0.19 61 4.5 0.0 2 13 39 50 38 65 0.80 3 10 0.19 61 4.5 0.0 2 13 80 91 79 106 0.80 4 10 0.19 61 4.5 0.0 2 13 121 132 120 147 0.80 5 10 0.19 61 4.5 0.0 2 13 162 173 161 188 0.80 6 10 0.19 61 4.5 0.0 2 13 203 214 202 229 0.80 7 10 0.19 61 4.5 0.0 2 13 244 255 243 270 0.80 8 10 0.19 61 4.5 0.0 2 13 285 296 284 311 0.80 9 10 0.13 42 5.0 0.0 2 14 326 338 325 346 0.78 10 10 0.2 64 4.5 0.0 2 13 367 378 366 388 0.79
Sequence Information
- Coding Sequence
- ATGGCCGCCGCGATTGACTACTGCGTGCCTCGTACCACGATACTCAGTACGCACAGCGATAAGCCACATCATACACGCCAACACCCCAATGACACACACGACATTGCAGAACTAAATGACAATATGGCCGCCGCGATTGACTACTGCGTGCCTCGTACCACGATACTCAGTACGCACAGCGATAAGCCACATCATACACGCCAACACCCCAACGACACACACGACATTGCAGAACTAAATGACAATATGGCCGCCGCGATTGACTACTGCGTGCCTCGTACCACGATACTCAGTACGCACAGCGATAAGCCACATCATACACGCCAACACCCCAACGACACACACGACATTGCAGAACTAAATGACAATATGGCCGCCGCGATTGACTACTGCGTGCCTCGTACCACGATACTCAGTACGCACAGCGATAAGCCACATCATACACGCCAACACCCCAACGACACACACGACATTGCAGAACTAAATGACAATATGGCCGCCGCGATTGACTACTGCGTGCCTCGTACCACGATACTCAGTACGCACAGCGATAAGCCACATCATACACGCCAACACCCCAACGACACACACGACATTGCAGAACTAAATGACAATATGGCCGCCGCGATTGACTACTGCGTGCCTCGTACCACGATACTCAGTACGCACAGCGATAAGCCACATCATACACGCCAACACCCCAACGACACACACGACATTGCAGAACTAAATGACAATATGGCCGCCGCGATTGACTACTGCGTGCCTCGTACCACGATACTCAGTACGCACAGCGATAAGCCACATCATACACGCCAACACCCCAACGACACACACGACATTGCAGAACTAAATGACAATATGGCCGCCGCGATTGACTACTGCGTGCCTCGTACCACGATACTCAGTACGCACAGCGATAAGCCACATCATACACGCCAACACCCCAACGACACACACGACATTGCAGAACTAAATGACAATATGGCCGCCGCGATTGACTACTGCGTGCCTCGTACCATGACACTCAGTACGCACAGCGATAAGCCACTTCATACACGCCAACACCCCAACGACACACACGACATTGCAGAACTAAATGACAATATGGCCGCCGCGATTGACTACTGCGTGCCTCGTACCACGATACTCAGTACGCACAGCGATAAGCCACATCATACAGTTTGCGATAATTAA
- Protein Sequence
- MAAAIDYCVPRTTILSTHSDKPHHTRQHPNDTHDIAELNDNMAAAIDYCVPRTTILSTHSDKPHHTRQHPNDTHDIAELNDNMAAAIDYCVPRTTILSTHSDKPHHTRQHPNDTHDIAELNDNMAAAIDYCVPRTTILSTHSDKPHHTRQHPNDTHDIAELNDNMAAAIDYCVPRTTILSTHSDKPHHTRQHPNDTHDIAELNDNMAAAIDYCVPRTTILSTHSDKPHHTRQHPNDTHDIAELNDNMAAAIDYCVPRTTILSTHSDKPHHTRQHPNDTHDIAELNDNMAAAIDYCVPRTTILSTHSDKPHHTRQHPNDTHDIAELNDNMAAAIDYCVPRTMTLSTHSDKPLHTRQHPNDTHDIAELNDNMAAAIDYCVPRTTILSTHSDKPHHTVCDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -