Mlae025657.1
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- clz9
- Assembly
- GCA_947458855.1
- Location
- OX375856.1:1725994-1728567[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-08 3.6e-06 27.7 0.0 4 36 11 43 8 49 0.89 2 2 1.1e-08 3.6e-06 27.7 0.0 4 36 234 266 231 272 0.89
Sequence Information
- Coding Sequence
- ATGGAGCGAAAAAAACCTTATACAAATCATGACGTTGAACGTGCTCTCGAAGCTATTCGTAATGGAACTAGTTTATATAAAGCTGCCAAAGATTACAAATTACCTGAATCTACTTTAAGAGATAAACGCGATCAAAAGTACCATACTAATATACCAGGACACAAAACCGTGTTAACTAAGTTTGAGGAATCCCAAATTGTTGGCTGGATTCATTACCTAGTAAAACTTGGATTCCCCGTAAGCAAAGAACAACTTATTAACACAGTTTCTAAACTCGTCCTTAACTTAGAGCGAACTAACACATTCAAAGATGGTGTACCAGGATCACGTTGGTATACAATTTTTTTAAAACGTCACCCTATGGTTGCTAAGCGGGTTTCCCAAAACTTACCAACTCATCGTAATAAagtaacagaatcagatatacggagctggtttcatagagtggaaagttttttcaaagataataatctaatgactgttttacaagatgcttcacgcgtttataactgtgatgagacagcattctttctcagtcctaaagcaaaggacgtattggtacaaagaggaagcaaacgtgtctacaacagagtagccaatgataaaagagaatgtcttactgtattGGCTAATGTTTCAGCAAATGGTGAGATAGCACCTCCGATGAGCATGGAGCGAAAAAAACCTTATACAAATCATGACGTTGAACGTGCTCTCGAAGCTATTCGTAATGGAACTAGTTTATATAAAGCTGCCAAAGATTACAAATTACCTGAATCTACTTTAAGAGATAAACGCGATCAAAAGTACCATACTAATATACCAGGACACAAAACCGTGTTAACTAAGTTTGAGGAATCCCAAATTGTTGGCTGGATTCATTACCTAGTAAAACTTGGATTCCCCGTAAGCAAAGAACAACTTATTAACACAGTTTCTAAACTCGTCCTTAACTTAGAGCGAACTAACACATTCAAAGATGGTGTACCAGAATCACGTTGGTATACAATTTTTTTAAAACGTCACCCTATGGTTGCTAAGCGGGTTTCCCAAAACTTACCAACTCATCGTAATAAagtaacagaatcagatatacggagctggtttcatagagtggaaagttttttcaaagataataatctaatgactgttttacaagatgcttcacgcgtttataactgtgatgagacagcattctttctcagtcctaaagcaaaggacgtattggtacaaagaggaagcaaacgtgtctacaacagagtagccaatgataaaagagaatgtcttactgtattggctaatgtttcagcaaatggtgagatagcacctccgatggttttgtttccttataaacgtcttccaaagaatttggttcctgagattccattaggttggggagtcggatcgaatgaaacagggtggatgacaatggagacgttctatgaatatgtcacaaatgtcttttatccatggctttgccaaaagaacatcatcttgccgatagcattatttatggacggccattcatcacacattcctcttccactcagtttattttgcaaagaaaaaggcatagttttaactgctttactaccgaattctacacatattttgcaaccgttagatgttggagtattcagacccgtaaaagggacatggaaaattatcgtccacgaatttcggttggaacaccactatgctaaaatgaaacgatctgattttgcacAATCTGGAGAAGAATGGAAAGGCGATGAATGTGACAAGAGTTTGTTTCAATATTGGAAAGCACTGACTCAAGAAAACCCGGTATTGAGTCAGGATATCATATTTGATTTTGATGATTCCACTTTAATAAACAACATCAATGATAATAATATATCTGAAATTGTTATGGAATTAGATATTGGTGAAAATGGCAGCTTAAATATACCTACCAGTCCACTATCTACTAAAATAGGAGAACTTGATCATGCAGAAGAACCCTGTTGTTCAAAGTCATTAGTAAACCCATCAGTTGTACTTCTCCATAACGAATATCTTGCCGAAAAAGAAAATGTAACCTCTTTACAAAATAATTCTCCGTTAGTTGATATCACACATAAAAACTTAATCAAAGATAACACTCCAGAAAAGGTACACAATTACATGACTAGTTTACAGACCCCGTTCAAAAATGCATTTTATTTCCCAAAAATAGTAGACCCTTTACAAAAAAAGCGAGTTACTAAAAGGCTCACACCAACAGTTGCTACTGCAGATGAATTTATAAAATACTAA
- Protein Sequence
- MERKKPYTNHDVERALEAIRNGTSLYKAAKDYKLPESTLRDKRDQKYHTNIPGHKTVLTKFEESQIVGWIHYLVKLGFPVSKEQLINTVSKLVLNLERTNTFKDGVPGSRWYTIFLKRHPMVAKRVSQNLPTHRNKVTESDIRSWFHRVESFFKDNNLMTVLQDASRVYNCDETAFFLSPKAKDVLVQRGSKRVYNRVANDKRECLTVLANVSANGEIAPPMSMERKKPYTNHDVERALEAIRNGTSLYKAAKDYKLPESTLRDKRDQKYHTNIPGHKTVLTKFEESQIVGWIHYLVKLGFPVSKEQLINTVSKLVLNLERTNTFKDGVPESRWYTIFLKRHPMVAKRVSQNLPTHRNKVTESDIRSWFHRVESFFKDNNLMTVLQDASRVYNCDETAFFLSPKAKDVLVQRGSKRVYNRVANDKRECLTVLANVSANGEIAPPMVLFPYKRLPKNLVPEIPLGWGVGSNETGWMTMETFYEYVTNVFYPWLCQKNIILPIALFMDGHSSHIPLPLSLFCKEKGIVLTALLPNSTHILQPLDVGVFRPVKGTWKIIVHEFRLEHHYAKMKRSDFAQSGEEWKGDECDKSLFQYWKALTQENPVLSQDIIFDFDDSTLINNINDNNISEIVMELDIGENGSLNIPTSPLSTKIGELDHAEEPCCSKSLVNPSVVLLHNEYLAEKENVTSLQNNSPLVDITHKNLIKDNTPEKVHNYMTSLQTPFKNAFYFPKIVDPLQKKRVTKRLTPTVATADEFIKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -