Mlae029285.1
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- -
- Assembly
- GCA_947458855.1
- Location
- OX375855.1:18398828-18405307[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-09 4.9e-07 30.4 0.0 4 39 171 207 168 211 0.90 2 4 3.8e-11 1.2e-08 35.6 0.6 4 39 225 260 223 264 0.93 3 4 9.2e-16 3e-13 50.3 0.1 4 45 280 322 279 322 0.97 4 4 1.7e-17 5.6e-15 55.9 0.0 1 42 329 371 329 374 0.95
Sequence Information
- Coding Sequence
- ATGCCCGGTCACCAAGTCCCGCAAGTCAAGTGTGAGCGTCTGTCTGATGAAGAAGATGCATCACCGCCGCCCTACCTACACATCCCCTGCACGCCGCAAAAAAACTTTATTCCACTTCCATTTATGAAACTAGAACCAAACGACGAGCCAGCTTACTGTCATGATTCCGTCCCAACACAGCTGATAAATTTGCAGACTGTAGAAGTGCTAGAAACCATGTCTCCGGCTGCACCTTCAGCAACTCCTGTACCTGCCCAGCGGCCCCCAGGATATCGAGAGCCTGCCTTATTGCAGACCCTGGAGCCACAGTGTAGGACTGCGGGTTCGACCTTGAAAATAGATAATAATATTTTGTTAAGAAACGAAGACTCTTCCGAATTTGTGCCTTTCATTATAAAGGATGAACCTCTGTCAGAAGGAGAACAGCAGCATCTTAGCGGTGAAGACACCAGTGACTCGTGTAGCATGGAGATGGGTGCGGGGAAGTCTACCAAGTCTTGGTCTCAGAAGGACATGGACAATGCTTTGGAGGCGCTCCGAACACAGAATATGAGCCTTACTAAGGCTTCCTTAACATTTGGCATTCCTTCCACAACACTATGGCAGCGAGCACATCGTCTCGGCATCGACACTCCCAAGAAGGAGGGAGGTGCCAAGTCCTGGAGCTCTCACACGCTGAGGGCCGCACTACATGCCCTGAGGGCCGGCGCACTATCAGCCAATAAGGCCAGCAAGGCTTATGGAATACCAAGCAGCACCCTATACAAAATAGCTCGTCGTGAAGGTATCCGTCTCTCGGCGCCATTTAATGCAGCACCTACGTCGTGGTCTGCCAGCACTCTTGCCCGGGCGCTGCATGATATCCGCAGCGGCCGCGCTTCTGTGCAGCGAGCCGCTCAGCACTACGGGATACCAACTGGCACGCTGTACGGCCGGTGTAAGCGAGAAGGTATAGAGTTGTCTCGCTCTAACCCCACGCCGTGGTCTGAGGACGCCATGGGAGAAGCTTTGGAAGCTGTCAGAGTGGGTCAGATGTCAATCAACCAAGCTGCCATACATTACAACCTGCCTTACTCGTCGCTGTACGGCAGGTTCAAGAGATGCAAATATCCACCACAGACAATTCTAACGATACCACCAACGAACGCCCAAGAAACTCTAGAAGCCGAGCAATCCCAACATTTCTACCCCCACTACCCCAGTAACATACATACACAAGAAGTACATCTCTACCCACCCCAGATTCCTATAGTTACCGAGATAGACTTACACAATCCAATAGTCAGCCAGGCCAGTGAAATGTACGCAGAGACAGAAGTGTATTATAACCAAAATGGTATATTATCGAGTTGA
- Protein Sequence
- MPGHQVPQVKCERLSDEEDASPPPYLHIPCTPQKNFIPLPFMKLEPNDEPAYCHDSVPTQLINLQTVEVLETMSPAAPSATPVPAQRPPGYREPALLQTLEPQCRTAGSTLKIDNNILLRNEDSSEFVPFIIKDEPLSEGEQQHLSGEDTSDSCSMEMGAGKSTKSWSQKDMDNALEALRTQNMSLTKASLTFGIPSTTLWQRAHRLGIDTPKKEGGAKSWSSHTLRAALHALRAGALSANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTSWSASTLARALHDIRSGRASVQRAAQHYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYPPQTILTIPPTNAQETLEAEQSQHFYPHYPSNIHTQEVHLYPPQIPIVTEIDLHNPIVSQASEMYAETEVYYNQNGILSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -