Basic Information

Gene Symbol
ct
Assembly
GCA_947458855.1
Location
OX375862.1:5571447-5577625[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8e-32 5e-28 98.0 0.0 4 77 323 397 321 399 0.96
2 2 1e-31 1.4e-27 96.6 0.0 3 75 531 604 529 608 0.96

Sequence Information

Coding Sequence
ATGGCGCGGTGGCGTTGTGAGAAATTGGGATCCAAAGAAGGTACAATAGGCCCTGGATTCGGTAGACCTGATGGAGACGATGACCGTATCGCTCACATGCTGAATGAGATGAAGCATCCAATGGGTCCTCACAACGATGATTCTAGAAGTAATGATGACTCCAGTTCACCTAGAACACAATGTCCTTCTCCATTTTCTAATAAGGATTCAAGCCAAAATAGAAGATTGAAAAAATACGAAAACGATGACATTCCCCAAGAAAAAGTTGTGCGAATATATCAAGAAGAATTGGCTAAAATAATGAGTAAAAGGGTTGAAGACATTCGCCATAATAGAGATGGATTTCCTGGAATGTTTCCACCCTTTTTCAGCGGCGGTATGCCTCCTCACATGGAGCGAACTCCTGAGGAATTCCGAATGGCCATTGAAGCATATCATCGAGAATTAGCCAAAATGCAACCCGCAGGCAACATGCAGAACATGCACAACATGCCCGGGATGCCGCCCTTCCCCAACCTCTTGGCTCTGCAGCAGCAGGCCATGCAGCAAGCCCAGAGCCAGCACGTTAACGGTTCAGGTGCTGTACAAGATTTATCCCTCCCTAAGGAAAAGAACGCCAAAATTAACGGTCTGACTGATAGTGATAAGGACAAAATGGACGCCGAAGAAGCTATGAGACATGCGGGTAGCGCATTCAGTCTAGTGCGGCCAAAATTGGAACCGGGGTCGCATCAATCCACGGGTTCATCTGCTTCCAGTCCGCTGGGGAACACAATCCTTCCTCCAGCGATTACGCCTAATGATGATTTCAATAGTTCAGCAGCGGCGAGTCCTCTGCAGAGAATGGCTTCCATTACTAATAGTTTAATATCCCAACCTTCCAATCCAACTCACCACACGCCTCCACAGAGATCTATGAAGGCAGTGTTACCTCCAATAACTCAACAGCAATTCGATTTATTCAATAACTTGAACACTGAAGATATTGTTCGGAGGGTTAAGGAAGCCTTGAGTCAATATTCAATAAGCCAAAGACTGTTCGGTGAATCAGTGTTGGGACTATCGCAGGGTTCAGTCAGCGATTTATTGGCGCGTCCTAAGCCATGGCACATGCTTACGCAGAAGGGCAGAGAACCGTTCATCAGAATGAAGATGTTTCTAGAAGATGACAATGCCGTGCACAAGCTTGTAGCCTCGCAGTACAAAATTGCACCAGAAAAGCTCATGCGTACCGGAAACTACAGCGGCGCACCACCTTGTCCTCCAAATATGAACAAACCGATGCCGATGGCGCCAACGCAAAAGATGTTGTCGGACGCCACGCACCTCCTGTCCAAGATGCAGCAAGAGCAACTGTTACCCGGACACCTGGGACCGCTGGGACAGCTCGGTCAGCTCGGCCAGCCTTCCCCGCTGCTGCTGACCCCGCCCGGGTTCCCGCCGCATCACGCTGTCACTCTACCGCCGCAGCATCACGATAATAATAATAAGGAGCGTAAACCAGCGCCGCCGCCGCATCACCCACCTCCCATCATGCGCTCTCTACACCAACATATCTCCCCCAGTGTCTACGAGATGGCTGCCCTCACCCACGATCTCGACACCCAAACCATCACTACCAAAATAAAGGAAGCCCTTCTAGCGAACAACATCGGACAAAAGATATTCGGCGAGTCCGTGCTCGGCCTCAGCCAAGGATCCGTTAGCGAACTGCTCTCCAAACCCAAACCGTGGCACATGCTTAGTATCAAAGGCCGCGAGCCCTTTATCCGCATGCAGCTCTGGTTGAGCGATCCACACAACATCGACCGACTTCAAGCGCTCAAGAACGAGCGCCGCGAGGCCAACAAGCGCCGCCGATCGAGCGGAGGGCCCGGACAAGACAACTCCTCCGACACCTCTTCCAACGATACCTCAGAATTTTACCACTCAAGTTCGCCGGGGCCTACGCCGGGAGCTCCTTCTGCTAAGAAACAGCGCGTGCTTTTCTCCGAGGAACAAAAGGAGGCCCTTCGGCTCGCTTTCACGCTCGACCCCTATCCTAACACGCCCACCATAGAGTTTCTCGCGGCCGAACTCGGGCTGTCAACTAGAACCATAACCAACTGGTTCCATAACCACCGCATGCGACTCAAGCAACAAGCACCGCACGGATTGCCAGCAGAGCCGCCACCGCGAGACCAGGCGGCGACGCCTTTCCAGCCGGCCCAGTTTCGACTGCTTCTCAACCAGAGGCTGCTAGAGATACAGAAGGAGAGGATCGGTTTAGGCGGAGTACCGTTGCCGTACCCGCCTTTCTTCGCCGCAAACCCGAACCTCGCGGCGCTCATCGGACACGGACTAATGCCGCCGAACGAGCGGCTCAAGGACCAAACTAGCGGCCTAGACCTGTCGATGCCGCTAAAGCGCGAGCCCGACGGGGATGACTTCGACGACGATGACGCGGAGAGCAACCTTGGGTCAGAGGACTCGATGGACGACGGGGATTCCAAGACGGAAGCCAAGACGTCGACGCCGGCCGGCGGGCGATCGAGCCGACGCAAGCCGGCCGCGCCGCAGTGGGTCAACCCAGACTGGCAGGACGACCGGCCGCGCCGCGAGAACGAGGTTATCATCAACGGCGTGTGCGTGATGCGCGGCGACGACTACCGCCGGTCGTCATCCCCCACGGTGCGGGTGGAGCCGTCCCCCGCGCCGGCGCCGGGCCCCGAGCGGTCCCCGGCGCGGTCGCCCCCGCCCGAGGACGCGCCGCCGGAGGAGCACATCAAGGCCGAGGCCGACGACGACCGCTGGGAGTATTGA
Protein Sequence
MARWRCEKLGSKEGTIGPGFGRPDGDDDRIAHMLNEMKHPMGPHNDDSRSNDDSSSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMSKRVEDIRHNRDGFPGMFPPFFSGGMPPHMERTPEEFRMAIEAYHRELAKMQPAGNMQNMHNMPGMPPFPNLLALQQQAMQQAQSQHVNGSGAVQDLSLPKEKNAKINGLTDSDKDKMDAEEAMRHAGSAFSLVRPKLEPGSHQSTGSSASSPLGNTILPPAITPNDDFNSSAAASPLQRMASITNSLISQPSNPTHHTPPQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPMAPTQKMLSDATHLLSKMQQEQLLPGHLGPLGQLGQLGQPSPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPAPPPHHPPPIMRSLHQHISPSVYEMAALTHDLDTQTITTKIKEALLANNIGQKIFGESVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDPHNIDRLQALKNERREANKRRRSSGGPGQDNSSDTSSNDTSEFYHSSSPGPTPGAPSAKKQRVLFSEEQKEALRLAFTLDPYPNTPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPPRDQAATPFQPAQFRLLLNQRLLEIQKERIGLGGVPLPYPPFFAANPNLAALIGHGLMPPNERLKDQTSGLDLSMPLKREPDGDDFDDDDAESNLGSEDSMDDGDSKTEAKTSTPAGGRSSRRKPAAPQWVNPDWQDDRPRRENEVIINGVCVMRGDDYRRSSSPTVRVEPSPAPAPGPERSPARSPPPEDAPPEEHIKAEADDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01451353;
90% Identity
iTF_01016481;
80% Identity
iTF_01016481;