Basic Information

Gene Symbol
kn
Assembly
GCA_947458855.1
Location
OX375853.1:18659062-18670077[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.6e-141 3.6e-137 459.3 0.0 182 387 14 240 10 244 0.98
2 2 2.5e-08 0.00025 20.6 7.7 419 502 248 339 240 402 0.75

Sequence Information

Coding Sequence
ATGTTAACCATCGTTTCAGTCAGCTATGGACTTAAACAATGGTTTTTCTTGAAATTCTTCCTGAAGTGCAATCAAAATTGTTTGAAAAACGCTGGCAACCCTAGAGATATGAGAAGGTTTCAGGTGGTGATATCAACTCAAGTGATGGTGGACGGCCCTCTGCTGGCGATATCCGACAACATGTTTGTGCACAACAACAGCAAACATGGCCGAAGAGCGAAGCGTCTAGACCCTACAGAAGGTACAGAAGCCGTCATCGCTATTGCTTCTCCTACTTCTGGTTTATACCCACCTTTACCAGTAGCAACGCCTTGTATCAAGGCCATATCTCCGAGTGAAGGATGGACTTCGGGGGGTTCCACTGTTATAATTGTCGGTGATAATTTCTTTGATGGTCTTCAAGTTGTCTTTGGCACAATGCTTGTTTGGAGTGAGTTAATAACTTCGCATGCGATTCGAGTACAAACACCACCTAGACATATACCCGGAGTAGTGGAAGTTACTCTGTCTTATAAAAGTAAACAGTTTTGTAAGGGAGCACCGGGAAGATTTGTTTATGTTTCAGCTCTTAACGAGCCTACGATAGATTACGGATTCCAGAGACTTCAGAAACTAATACCGAGACATCCTGGAGATCCAGAAAAGTTACCAAAGGAAATAATTCTTAAAAGAGCAGCGGATTTAGCAGAAGCGCTGTATTCGATGCCAAGAAATAACCAGCTGGGTCTTGGAGCACCTCGATCACCACCTGCCAGTATGCCTTTCAACTCCTACACTGGACAACTAGCTGTCAGCGTACAGGATGCTGCTTCGTCGCAATGGACTGAAGAAGACTACGCGCGCAGCGGCGGATCCGTGTCACCCCGGTACTGTTCGGCAGCATCCACGCCGCATGCTGCATCAGCTGCCTCAGCATCCTACCCGCATCAGCATTATCCAGCTCCACCAACATCACTGTTCAACACTTCTTCTCTGTCGCTGGGTCCGTATCACCCGTCTAACATGAATGGCCATCTATCTGACTACCACTGTAACGCGTATAATGCGAAAGATAGCAGTTATTACACTGAAAGAAATGCAACTTCAAAGAACGACTGTCCGGTAAACACTCATCTAAAATGCGATGGCGTCGTGAAAGGACAGGATGGTAAAGACAGAAAGATTCGCAGTGCCTTCGAAGTAGTCAGACAGAGCCCTCCTCCCCGCTACGTTGCCAATTTTCAACATCAGAACCCGGCGAATTGGCAACATTTAACTGTGCAATGTTAG
Protein Sequence
MLTIVSVSYGLKQWFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTEAVIAIASPTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDAASSQWTEEDYARSGGSVSPRYCSAASTPHAASAASASYPHQHYPAPPTSLFNTSSLSLGPYHPSNMNGHLSDYHCNAYNAKDSSYYTERNATSKNDCPVNTHLKCDGVVKGQDGKDRKIRSAFEVVRQSPPPRYVANFQHQNPANWQHLTVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_01452123;
80% Identity
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