Basic Information

Insect: Monomorium pharaonis
Gene Symbol: -
Assembly: GCA_013373865.1
Location: CM023797.1:7024954-7042050[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 6.3 1e+03 1.3 4.3 2 19 167 184 166 187 0.83

2 17 3.2 5.1e+02 2.2 3.7 3 20 196 213 195 214 0.93

3 17 0.016 2.6 9.4 5.3 1 23 227 250 227 250 0.93

4 17 5 8.1e+02 1.6 1.7 1 14 521 534 521 538 0.87

5 17 0.0023 0.37 12.1 1.5 1 23 616 639 616 639 0.94

6 17 1.1 1.8e+02 3.6 0.5 5 23 646 665 645 665 0.94

7 17 0.61 99 4.5 1.1 2 23 671 692 670 692 0.96

8 17 6.4e-06 0.001 20.1 1.1 1 20 719 738 719 739 0.97

9 17 8.6e-06 0.0014 19.7 0.1 1 22 870 891 870 891 0.97

10 17 8.5e-05 0.014 16.6 0.1 3 23 899 920 897 920 0.92

11 17 0.2 33 6.0 0.2 3 21 982 1000 981 1001 0.91

12 17 0.026 4.2 8.8 4.1 1 23 1042 1065 1042 1065 0.92

13 17 3.7 5.9e+02 2.0 2.5 2 20 1113 1131 1112 1132 0.92

14 17 0.42 68 5.0 6.2 1 23 1140 1163 1140 1164 0.96

15 17 0.003 0.49 11.7 0.9 1 23 1239 1262 1239 1262 0.92

16 17 0.11 17 6.9 0.4 1 23 1577 1600 1577 1600 0.96

17 17 2.1 3.3e+02 2.8 0.7 2 23 1624 1646 1623 1646 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	6.3	1e+03	1.3	4.3	2	19	167	184	166	187	0.83
2	17	3.2	5.1e+02	2.2	3.7	3	20	196	213	195	214	0.93
3	17	0.016	2.6	9.4	5.3	1	23	227	250	227	250	0.93
4	17	5	8.1e+02	1.6	1.7	1	14	521	534	521	538	0.87
5	17	0.0023	0.37	12.1	1.5	1	23	616	639	616	639	0.94
6	17	1.1	1.8e+02	3.6	0.5	5	23	646	665	645	665	0.94
7	17	0.61	99	4.5	1.1	2	23	671	692	670	692	0.96
8	17	6.4e-06	0.001	20.1	1.1	1	20	719	738	719	739	0.97
9	17	8.6e-06	0.0014	19.7	0.1	1	22	870	891	870	891	0.97
10	17	8.5e-05	0.014	16.6	0.1	3	23	899	920	897	920	0.92
11	17	0.2	33	6.0	0.2	3	21	982	1000	981	1001	0.91
12	17	0.026	4.2	8.8	4.1	1	23	1042	1065	1042	1065	0.92
13	17	3.7	5.9e+02	2.0	2.5	2	20	1113	1131	1112	1132	0.92
14	17	0.42	68	5.0	6.2	1	23	1140	1163	1140	1164	0.96
15	17	0.003	0.49	11.7	0.9	1	23	1239	1262	1239	1262	0.92
16	17	0.11	17	6.9	0.4	1	23	1577	1600	1577	1600	0.96
17	17	2.1	3.3e+02	2.8	0.7	2	23	1624	1646	1623	1646	0.94

Sequence Information

Coding Sequence: ATGGCTAGAGTTCAATCATACTCAAGAGTGGTAGATCCTGTACTCATAAATACAAATCCAGCTctTAATACCGAAATTCAAAGTGGGGTGAAGATTAAGGAAGAACCTAAGGATACGACATCGGATTCCGATACAAtagaagatatattaaataaaaattgctttagTTTGATTGATCACGATTACCATTATCGCGACGAATCatcatttaaaagtatttcgtGTAAAGACATAAATAGTACAGAAAGTAAACATTTATCGAATAGTCATCATACACATTCAAATGATGTAAACGAGATTATTAATGTTGAGCGTAAAGTTACAAAAacgaagaaagaaatagataataccttacaatttaagaaacaaaaatgttttaataaaacctCTAACAATAAGAACGTTAATATATTACGCTCAACTAAAGAtaccataaaaaaaagaagaaaactacgacataaaagtaaattagtaaaaaagaaatctgttGACGCAAATAAATGTGACATATGTTTTAGAAAGttctcttcttttaaaaattgtatagtcCATAAACAACATTATGCCTTTGAAAAAGATAACAACTGTAGGTTTTGTAGACAACATTACGTAACACAAGAGGAATTACAGTCCCACAAGTGTCCCCGCGAGCATAGGGTTCGCATAAAGACATTTAGATACCATTGTAATTTTTGCAGTCGTACCTTTAAGGAAAAAGGGCTTTTACAATCTCACTTGTTTCACATACACAgtgagttaatattttttaataacacagTTAAACACAGTACTTCCAGATCTGAGAATGTAAATACTTCTTCTCAAGATGATACTTTAAGAACTAATATAAATGATGaattattgtgttttaataatcttgttaAATCAGAGAAGATAGATACCGTAataaataacgttaataaatCTTGCGATAATAATATGATAGATACTGAAAAATCAACGATTAACGAATCATCCGATGAGATGTCACTAACTGGTAAAAGATTACGGCAACCAACATTAACGGAATATATTGAACTTTGCAAAAAGAAAcgcgatattaaaattagtccaaataaattaaacattacgaAAGATGAGTTTTCTACGTGTGCTTCACATCATGATAAACAAACAAGAGGAAATCTAAGGCCAAAAGAATGTAATGAgcaaattgatttttcacCTGCAAAATTAGATAACTATTCCAAACAAAAAGCACATTCTACTCTGGAACAAAATGCACAACctgaaaagtgtaaaaaaccatttgtaaaattatatgcagatgttgaaataatgaaatctTTTCTGGAAAACCTTCCCGATACGGCCAAAGATAAAGGAACCGAGGATCAAGTGAGTGACGTTTCGTATGATCGTGGAGTACCTTATAGTTTACGATCTCTAAATGGAGTCTCTTATGTGGAAGCAGATTCGAATTCAAGAATGaggaaaagcaaaaatataccTAAGAAGTCTCGATTTAACATagaatctaatattaaaaaagaacagaatattgatttaagtaaaatagatTCGAAACTTAAAGCTCGTTTTAAGTGTAAGAAGTGTACAATTTCTTTAACAAGATGTGACGAACgactaaaaaattcttatcagATTTCTACAACCGATGTGGGAAACAACTCTCTTACTATTGAAGGCAATCTTACGTTGGATCAAAAAAGTGATCAAAAAAGTGAAGTGCGAAATACAATGATACTCAAAGACTTAGAAGTTTCTCTGGAGCGTTTAGCTCCAGTTGTTCCAGATATAAAAGCTACAGTTATGAAAACAGATATAAAAGAATCGGACTTGgagaaatacaattataattactttttgtgtaaaatttgtgaGAAGAGTTTTACTTCAAAATTGGCCAAACGTCTACATATTAAGTCGACTCATGTAGCATACATGTCAAGCATATGTGATGCACGATATACAGGGAGGCATAAATTACTTCAGCATTATCTACGCGAACATCAATTTGAACAAAATCAATGTTGCATTTGTTACACTTTATTATCCGATTATGAAGAACTGAAGCAACATTTATATGTTCATTGTCTGAAGTATATTCAAAGAAAGGACGACCAATATCAAGTAAACGTCGAATTAAACTGCAGCCTGATAAAAAACGCTTATAAGTGTTTTCAATGTGACAAAACATTCTCATCACAATCATCTTTATTAGCACATCAAAGTTGTTGCgcaataaaagaagaaaaacaggAAGATTTCATGGAACAGACAAGTTCATATTCGAAGGAAAGTCTTGAGGTGCAGCAGAAGAATACTGATGAAAATATAGTTACATGTAATGAAGAGATTAATTCAAATACTCCATGTGAacctttaaataatgattatttaaagaaattaaacgaACATAAAGTTTCGCTTTGTGAAAATGAATCGAGAACTAATAAAGCCAAACAAATTCTTGTTaagaataacttattaaatgaAGAGAAACTCGAAACCGTCAACGAATCACAAAATTCTACGaagcttttagaaaataataattccacAGTTAATAATcagaatattacaaatacacaATTGGATGACGTTACAGGAAAAAATGTGACTTATCCTTGCGATATATGTGGAAAACAATTTCAGAATTCCAAGAATTTGGAGATACATGTACGTACTTTTAGCTTTACTACCGATATCTGTCCAATGTGTGGCACCGGATTTAGTTCTAAACGTCTTCTACAGACACATATCACTGCAGCGCACGTACCGCAGATTTCCAAGACTTACAGTTTCCATTGTGTATTCTGTAACCAaggctttttaaaaaaacacgatCTTCGACCTCATATATTACACTTGCATGGTCAACAAATGCTCAACACCCTTACGCGCAATCTCAATAATCAAGAGAAATCTGATGAAACAGTTACAACCCACACCgcaatgtgtaatatttgtaacttGGTATTTGAGACTCATGATCGTTACGTAGAGCACCGGatgtattattacaaaaaccaCACGTTCAAGTGCAAACTTTGCGAACAAAACTTTCAAGGAATGTACATGTTTCATCATCATAATAAACTTATACATTATTCAGAGGATAAACGCAAGTTATACAGTTATATCTGCGATATATGTAACGAGGGATTTAATCACGAgtcacatttttattcgcACAACATGCATGTTCATTCGAATGAAGTAAATTTAGCTGAAACTGCAAAAGAATTTGAAGATAGAAACCGTTCAGATTACTCATCTCAAAATGCCCAGGAGcagattaaaaatgttattatgaaccataaacaaaaaaaacagcCATCCAATGAGTGTATTTGCCAAATTTGTCAGCTGAAATGTACAGATATGAATCATATGGCAAAGCACGTAGAGTTTTATGCCAATGATGGCGATTTTAAATGTGACAAGTGTGAAAGACGATGTAGAACATTTCCATTACTTGATCAACATAGGAAATTAACTCACCATTGTCGTGATGTTTATAATGGACATTTATGTCATATTTGTGGTGAAGTTTTGGAAACTCTTATTGCATTGAAATGTCACGAGAAACACTCACATTCAAATACTACTAACAATACGGATAATAGGAAAAATTGTAATCAGAAGTCATCTTCGAACATTACACGCAAGATAGCAGAACATTCATATGAATCTAAGAACATCAACAATATAGCTAATGTAACTGAATATAATTGCGTATTCTGCGATATGAAATTCTCTACTGCCAGCAGTGTCCAAACACACATTGTTCATGTTCATATGGatgatatgttaaataaaagagcTACTTTAAGACTAGCTCTTCCCATTACTAATAGCTATGACATACAGAAACAATTTGCTGAAACTGATCAAACACCATCATCATCTTCAATATCATCATCTGAAGATAAGTCGAttcaatttcttcaaaaatcaGCAATTCAACAATCTAATATTGTTACTAATATTATGCCTAAAACTGGAATAAACGATGGAActactattaaattaaagaaattgaaaactttgaagaaaattacaGAGAAGACGCCAATCTCTTCTATTTCATGTATTAACAAATCTAATCAGGACAATATTTCGTCATGTAATACTATCGCATCGAACACGAAATCAAGAACGAATACTTCAGTTTCTCTCTCCATTGgacaaaaatctttaaagctCGTCGTatcaaataatgaaataagaaataacagTTCAGCTCCTTTATCAACTGGAtcaacaattttcaaaactgTCGTATCAAACGCTGTATCTAATGATAACACGGAATCAAAAACGGATACTTCATGTTCATCATCCATTGGATCAACAAGTTCAAGAAATGTCGCATCAAGTGAAACAGAATTCAGAAATAACAATTCACTTTCTTTATCTACTGGGTCAACaacatttaaaacttttgtatcaAATACCGAATCTAAAGCTAACGCTTCAACTTCTCCATCTAAATCAGCTAATGATCTCCGAAAAAGTTATGAAGTTCCTTCAAAAGTTAAGTCAATCAATGAATATAAAGCTAATTCAGTTTCATCATTAAATAGATCTGTAATAGTTGAAAATAAATCCAAAACAACATCTGTATGTCCTTTATCAACTATATCTTTATCAACATTCAAACATGTTATGCCACAATCTTGGCAAAGCAACAGAATTACAAATCAGAAATCAGAATCAGAAAACAACTACAATTATAGTTATTCATGCCCGTTATGTCCGCTAGAATATCCATCTTTGATGTTCTTCCACGCTCATCTTAAGTATGCTCATGCAGATTCCATCCGAACTCAGAAATTGAACATTCCACAGATGAATCAGGCTCAGAAAGCTTCTATAATAGAATGTTTATTGTGTCCATGTATCTTTCTTGATGAGATCTCGTATAAGAAACATTTGAGAAACTCTCATATGTATTTCGTGTATATCTCAAACTCTGAAACTCAAGAGGtggcaaaaatcaataactCATCTAATCCCCCAGTAACACAGACAAGCATCAATAAAGAGGTCACAATTCCTGAGGTAATTACTGtagatgatgatgataatcaTCATCATGATAACATCAAGAATACAGCAGATCAACAGACAACCAAAGTAACAGCCATGCTTGATCACAGAGAACAAAACGAGAAAATTGGTAAATTGAGAGTAAAGCCTTTTGCAAGGATCATGGAAAATTTACCTAAGGATTCTGCATCGGAAGTCTTGTAG
Protein Sequence: MARVQSYSRVVDPVLINTNPALNTEIQSGVKIKEEPKDTTSDSDTIEDILNKNCFSLIDHDYHYRDESSFKSISCKDINSTESKHLSNSHHTHSNDVNEIINVERKVTKTKKEIDNTLQFKKQKCFNKTSNNKNVNILRSTKDTIKKRRKLRHKSKLVKKKSVDANKCDICFRKFSSFKNCIVHKQHYAFEKDNNCRFCRQHYVTQEELQSHKCPREHRVRIKTFRYHCNFCSRTFKEKGLLQSHLFHIHSELIFFNNTVKHSTSRSENVNTSSQDDTLRTNINDELLCFNNLVKSEKIDTVINNVNKSCDNNMIDTEKSTINESSDEMSLTGKRLRQPTLTEYIELCKKKRDIKISPNKLNITKDEFSTCASHHDKQTRGNLRPKECNEQIDFSPAKLDNYSKQKAHSTLEQNAQPEKCKKPFVKLYADVEIMKSFLENLPDTAKDKGTEDQVSDVSYDRGVPYSLRSLNGVSYVEADSNSRMRKSKNIPKKSRFNIESNIKKEQNIDLSKIDSKLKARFKCKKCTISLTRCDERLKNSYQISTTDVGNNSLTIEGNLTLDQKSDQKSEVRNTMILKDLEVSLERLAPVVPDIKATVMKTDIKESDLEKYNYNYFLCKICEKSFTSKLAKRLHIKSTHVAYMSSICDARYTGRHKLLQHYLREHQFEQNQCCICYTLLSDYEELKQHLYVHCLKYIQRKDDQYQVNVELNCSLIKNAYKCFQCDKTFSSQSSLLAHQSCCAIKEEKQEDFMEQTSSYSKESLEVQQKNTDENIVTCNEEINSNTPCEPLNNDYLKKLNEHKVSLCENESRTNKAKQILVKNNLLNEEKLETVNESQNSTKLLENNNSTVNNQNITNTQLDDVTGKNVTYPCDICGKQFQNSKNLEIHVRTFSFTTDICPMCGTGFSSKRLLQTHITAAHVPQISKTYSFHCVFCNQGFLKKHDLRPHILHLHGQQMLNTLTRNLNNQEKSDETVTTHTAMCNICNLVFETHDRYVEHRMYYYKNHTFKCKLCEQNFQGMYMFHHHNKLIHYSEDKRKLYSYICDICNEGFNHESHFYSHNMHVHSNEVNLAETAKEFEDRNRSDYSSQNAQEQIKNVIMNHKQKKQPSNECICQICQLKCTDMNHMAKHVEFYANDGDFKCDKCERRCRTFPLLDQHRKLTHHCRDVYNGHLCHICGEVLETLIALKCHEKHSHSNTTNNTDNRKNCNQKSSSNITRKIAEHSYESKNINNIANVTEYNCVFCDMKFSTASSVQTHIVHVHMDDMLNKRATLRLALPITNSYDIQKQFAETDQTPSSSSISSSEDKSIQFLQKSAIQQSNIVTNIMPKTGINDGTTIKLKKLKTLKKITEKTPISSISCINKSNQDNISSCNTIASNTKSRTNTSVSLSIGQKSLKLVVSNNEIRNNSSAPLSTGSTIFKTVVSNAVSNDNTESKTDTSCSSSIGSTSSRNVASSETEFRNNNSLSLSTGSTTFKTFVSNTESKANASTSPSKSANDLRKSYEVPSKVKSINEYKANSVSSLNRSVIVENKSKTTSVCPLSTISLSTFKHVMPQSWQSNRITNQKSESENNYNYSYSCPLCPLEYPSLMFFHAHLKYAHADSIRTQKLNIPQMNQAQKASIIECLLCPCIFLDEISYKKHLRNSHMYFVYISNSETQEVAKINNSSNPPVTQTSINKEVTIPEVITVDDDDNHHHDNIKNTADQQTTKVTAMLDHREQNEKIGKLRVKPFARIMENLPKDSASEVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -