Basic Information

Gene Symbol
Trerf1_1
Assembly
GCA_013373865.1
Location
JABXFI010000020.1:3025491-3038083[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6 3.6e+03 -1.0 0.1 28 42 664 678 656 680 0.85
2 2 2.4e-10 5.4e-07 30.4 0.0 2 46 831 875 830 875 0.96

Sequence Information

Coding Sequence
ATGCATCTGGAGAGATATATTATCAACGCCGGTCACACTAAGGGCGGTCGCGGCGACGGGGATGCAGACGCGGAAGATGTATGCGCGTACGCGGCACCCTCGACGGGGGACGCGGAGAACAAGAAGAGCGAGAAGAAAGAAGTCGTCGGACCGCCCTTGCAGACTGCGTCCGTCAGCGTGAGAGCGCTCATCGAGGAGAAGATCATACAGAAGAGAACGACAGCAGTGGACGCGAATGGCAATCAGCAGCCACGTACAAATGCTACTGTCTTCACCACGCAAGCCGACGCCGTCTCGCAAATCGCCGTCAAGACGAACTTTGCGGTGCCGGCTCCGCCGCCTTTGGCGGCGGGGGAAAAGGTGCGTCGGTTTTCCGATGGTGAACACTTCCGGCAACCCAATATCACCGTGGGTGGCCATACGATTATGCAGAAGCAATTGCAAGAAGCGAAAACCCAGGCTCAAGCGCAAGCGCTTGCCGACATGATCCTAAAGGGTGCGAAAGTGGCTGTGAAGAGAACAACTTCCGACCCGGGACAAAGATTACACTTGACTTATCAACAGCCCGTGCAATCAGCGACGACCAACCAGCAACCGAACAATCAGCAGCCGCAGGCACAACCTGCAGTAACGGAAAGCTTCACAATGACAGGATATGCCGAGGATGGAGGTTACTTCAGCCCAAGCTTGCAGGACGAGGTGTTTCAGCAGGTTACAACGGTTCCTGATAGCGTACTTCTGCAGGCTACCCAGTTGGACTCGATCGAGTTTCAGACCACGGCCAGTCTGCTGCAAGAACAATCTACTACCGAACAGCTGCAGAATATCACACTGGGAGATACGAGATACGGAGTACCGAGCTCGCAGCACACGGTCAATCCGGATCTCCAAGCGCTGGTGAACTCGCCGTTACCCGACTCTCTGGCCGAATTCAGTACTTACGCCGCACAGTACACGGAAAGTCCTCACACGTTGTCGACCCAGTCGCCTCTGCCGTCGCCTTTAACGCGACACGATAGTCCGAGCTTCACATATCCGACGCCACCGGCTAGCCAAGAGGGCTTGCTCACCGGAAGCTTGCCATTGCTGAGTCCCCAAGAGGATCCGGAGAACGTACGACATGTGTCGTCGCCGCTCTCGGCGGCGTTCTACACCAGCACGATGTCATCCGCTGCGGCCGTGGAGGAGGCGTTGAACGAAGTGCTGCCGGGTGAATCCGAGGCAGATGCGGACCTTTACGGGTCCGGTTCGCCAAATCCGCACTCGCCACTGCCAAGCCCGTTATCGGCGACGTCGGCGCCGTCGCCGTTGCCGCCGTCCTCCGTCTCGTCGCCGGGACCGGTCACTTTTACGAGCACAAGTTTTCCCGTGTCGCCACATCACGCGCTGCAAAATCAGATGATGCCGAACTCGGAAGACCCTCTACTCTCCTCGACCTCGAAGGACTTCGCCTCCGGTCGTAGACGATTTGAATTCCAATCGTACAAGCTGATCACAAGCCAGAATCTAATGGATTTCGGAAACGGCAGCTTGGCTGGCATTGTCGTTGACAACAACGGCGAGTTCAAACTGATACAGACGGCGGGTTTGCAGAAGGCGAACGTGTTCGTGCAGGCGGGCTCTCTCAGTCCCGCGCTAACGTTCAAGAAAGAAATCCGACTGGCGACACCGAAAATCGAACCCGTGACCGTGAATCTCGGCCTAAACGTTCAAACGACAAATCAACAACAGTGCAACACGGGACAATTTAATCAGCAGCAAGTCGTCAACCCGGCCAAGTTTTTTGTTCAAACTAATCACGCGACGAAAAACAATATCTTGAGACATAAAACAACCATTGGAAGTTTACCGATACCCATCGAACAGATCAAGCAGGAGTTGATGGACGAGGACATATTTCTCAGTCCTGGCAGTTTACCCGCCAGCAGCCCTGTGCGACATTGTCGGAAGAGGCCACGCATGGATGGCGGCCAGTATGCCAGCAGTTCGCATTTTTATCCATCGCGATTGCGTAAGGCCTGCGACCGCCATTGGGACAGTAGTTACACACCACCACCGATCTTAGACCCGTCTCGTCCCGGGCCGGGACTGTACGCGCGATTGCATCAGCACGAAAGAGACTCGGATTTCAGCTCGGACGATTCTCAAGGGAATGACGGTCCTCCGCCAAGAATCAACATCGGCACAAGATATCAGGCCACGATACCTCCGGTAGATTACGACGGAGACAGAGAAAAAGACGGACCCGAAGCCGACCATCTTTTATGGGATCCTGGCATAAACAACGTGCTCACGAATACCGAGCTGGAGATGTACCTGCAGTTCGCGTGTTGTGCCGCGGTGCCGGGCGGTGGTAGGAACAAAGAATACGCGCTTCATCTGTTGCACATGTGCAAAGGAAATATTcatGAAGCGATGGTGAAATTGATGAGACCAACGCCTACTCTACCAATGGAGCATCCTCTGCTCAGCTACGAGTGCCACGAGTCCGATAGATGGACGTCACACGAAATGGACGCGTTCTATCAAGGACTACTCAAGTACAATAAGGACTTCTCTGCGATTTCGCGGGATGTCGGTGCCAAGACCGCAAAACAGTGTGTACAGTTTTACTATCTTTGGAAGAGGCTTTGTCCTGACGAGTACAAGAGGCTACGTATTTGTCATGGAAAAGGGAAGATCAAGAACGAGATTAAAGATAGTAAAGATACCAAAGAGCTACGCGACGCGATCGCATCCGTAACGGAAATGGACTTTAGTGACGACAAGTCAATCCTTCATCGTACACTGCTACAACAATCACACGAAAGAGAAAATTCGGCGACTCTGACTACTAGCGAAGGAGAGCTGAGGTTATTTGCATATGACTGCACAGAtAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGAAGCACCCAAACGGCCCAAATCGGCAATACCGGCCACGCCACAGTCAACACCAACTCACAAACTCACACTAGTTCTGAGCAACAACTACCCGCGCCCACCCTACTTCACTACCCCTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGTGCGCACATGAAATCTCACAGGCCAATCCCCTTGCCCGATTCAACGGGTCAGGAATCTAAGCGATCCTCGCAACAAGCGTCAAAAGCGCAACAGCTGCAGCAACCAGTGCCGTCGCAGCAAAGccaacagcagcaacagcaacaacaacaacaacaacaaccgGACAATGCTACGCCGCAAGCTCAAGACCATCAACAACAACTGCCTGCGAGTATCAATGATAACAACAACGCCAAAAATACAGCACATTTATGCCATAATCCGACGAGGCCCCCATAG
Protein Sequence
MHLERYIINAGHTKGGRGDGDADAEDVCAYAAPSTGDAENKKSEKKEVVGPPLQTASVSVRALIEEKIIQKRTTAVDANGNQQPRTNATVFTTQADAVSQIAVKTNFAVPAPPPLAAGEKVRRFSDGEHFRQPNITVGGHTIMQKQLQEAKTQAQAQALADMILKGAKVAVKRTTSDPGQRLHLTYQQPVQSATTNQQPNNQQPQAQPAVTESFTMTGYAEDGGYFSPSLQDEVFQQVTTVPDSVLLQATQLDSIEFQTTASLLQEQSTTEQLQNITLGDTRYGVPSSQHTVNPDLQALVNSPLPDSLAEFSTYAAQYTESPHTLSTQSPLPSPLTRHDSPSFTYPTPPASQEGLLTGSLPLLSPQEDPENVRHVSSPLSAAFYTSTMSSAAAVEEALNEVLPGESEADADLYGSGSPNPHSPLPSPLSATSAPSPLPPSSVSSPGPVTFTSTSFPVSPHHALQNQMMPNSEDPLLSSTSKDFASGRRRFEFQSYKLITSQNLMDFGNGSLAGIVVDNNGEFKLIQTAGLQKANVFVQAGSLSPALTFKKEIRLATPKIEPVTVNLGLNVQTTNQQQCNTGQFNQQQVVNPAKFFVQTNHATKNNILRHKTTIGSLPIPIEQIKQELMDEDIFLSPGSLPASSPVRHCRKRPRMDGGQYASSSHFYPSRLRKACDRHWDSSYTPPPILDPSRPGPGLYARLHQHERDSDFSSDDSQGNDGPPPRINIGTRYQATIPPVDYDGDREKDGPEADHLLWDPGINNVLTNTELEMYLQFACCAAVPGGGRNKEYALHLLHMCKGNIHEAMVKLMRPTPTLPMEHPLLSYECHESDRWTSHEMDAFYQGLLKYNKDFSAISRDVGAKTAKQCVQFYYLWKRLCPDEYKRLRICHGKGKIKNEIKDSKDTKELRDAIASVTEMDFSDDKSILHRTLLQQSHERENSATLTTSEGELRLFAYDCTDSFSGSVTVTMAGSTQTAQIGNTGHATVNTNSQTHTSSEQQLPAPTLLHYPCKICGKVFNKVKSRSAHMKSHRPIPLPDSTGQESKRSSQQASKAQQLQQPVPSQQSQQQQQQQQQQQQPDNATPQAQDHQQQLPASINDNNNAKNTAHLCHNPTRPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01422166;
90% Identity
iTF_01407212;
80% Identity
-