Basic Information

Insect: Monomorium pharaonis
Gene Symbol: cdc5l
Assembly: GCA_013373865.1
Location: CM023803.1:4030288-4041722[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 2.6 5.8e+03 -1.7 0.0 2 17 159 174 158 175 0.87

2 6 0.18 4.1e+02 2.0 0.0 14 46 212 249 208 249 0.79

3 6 3.1e-14 6.9e-11 42.9 0.5 1 45 255 301 255 302 0.95

4 6 1.9e-06 0.0043 17.9 0.2 3 43 310 354 309 355 0.96

5 6 1.1e-10 2.5e-07 31.5 0.0 1 45 363 408 363 409 0.93

6 6 1.4e-12 3.2e-09 37.5 0.1 4 43 420 459 417 461 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	2.6	5.8e+03	-1.7	0.0	2	17	159	174	158	175	0.87
2	6	0.18	4.1e+02	2.0	0.0	14	46	212	249	208	249	0.79
3	6	3.1e-14	6.9e-11	42.9	0.5	1	45	255	301	255	302	0.95
4	6	1.9e-06	0.0043	17.9	0.2	3	43	310	354	309	355	0.96
5	6	1.1e-10	2.5e-07	31.5	0.0	1	45	363	408	363	409	0.93
6	6	1.4e-12	3.2e-09	37.5	0.1	4	43	420	459	417	461	0.96

Sequence Information

Coding Sequence: ATGAGCGAATCCGACGATTCGGATATTTTGGCCGATATTCAGGCTCTGGACGAGGCCTTAGCTTTGGGTGTGAAACCAGTTTTGCAATGCCCCAGCCAACACTCTGACGACTCGTCGTCCTCGCACAATTTCGATGATCTCGAGGACAACGCTGACTGTTTGAACTATCTCTCTGAGAATCAGTGTATTGACGAGTCTCTGAACGCATACGAGATTAATACAAGGTTGATTACTGGCTTAACGATAGCCAAGAAGAAATTGACCACTCTGTTGGAAATATGCGAGAAAAAGATACAGCTGCTGGACGAGAGGATGGAATCCAAGGAAGGATGGAACTCGAGTTCGAGAACCAAGCTTAACAACGCCGGTATACCATACTTCAAGGACAAGAATTACTTTAGTGCCCCTAAGAACGATGACACCAAGTTGAAGGAAGCCCGCAACGAGTTATCCTTGTTCTCTTTGAAGAAGCCGAACCGTTGGTCGAGAAGGGACAGAGAAACGCTTTTAGCCGCCATACACAACCAGGCTATAGAATCGGTGCTGTCTGGAGAGAATGACAAAAAACCTGACCCGTCCACATCCGATAATCAGGCtgagaaagataaatttgtGCTCCCGAGAAATTTTAACGAGATGGTGGAAGCGATGGGTGAGAAAGACTTTGATTGGTACAAGATCTCCATCACGGACTTCAATAACAAGCATTCGCCAGGCGAATGCCGAGCCATGTGGAATGTTTATTTGCATCCCAACATCGAGAAGAGTGAATGGACGAGCGAGGAGGATAAGAAACTTCTCAAATGCgtgaaagaatataattatcaagatTGGGATGCCATTACGCAGAAACTAGGGACAAACCGTAGCGCATACCAGTGTTTCATTAGATACAATACTATCAAAAAGGTACCGAGCTCCGGGCACGCTTGGACCAGGCAGGAGGAcaagcatctcataaaaattgtaaatacaattagagTTGGAGACTACATACCCTGGGCCGAGGTCTCCAATCACATGCGGCACATGACCAAGCAGCAGGTCTATGTACGATGGATGTACAGTAGTGCGCCGCACTTGAAGAAAGGCAGATTCAATAAGGCGGAAACGTCGACTCTCTTGAAAGCGGTGCGGAAATACGGCACAAACTTCTCAAAAATTTCGAGCATCGTGATGCCACATCGAACCTCGGTGCAGCTTCAACTGCGTTACGAAACCGTGATGATGAATATCAAGAACGAATTTTCGAATCTGTGGACAGTCAACGacgatttgaaattaattaatttgcatacaAAGTACAAGAACGATTGGTCTAAGATATCGACATATTTTTCGAGAAAGTCAAGAACACAAGTGAGACATCGATATTACGCGATAGTAAGGTATACAATGAGAGGTATAAGTATCGAAAATATACCCAGACCAGTCTCTACATACCTccgctttaaaaaaattacaattaataagaaattatcgtCTCATAATATGCCAAAGTGTCCACTCGAAAAGCCAAAGCAATACTCCATAAGTGTTTTCGAAATTCAGTTAAGGTTGTACGAAACTCTCTCTTTTCCACCTTCCGTCAGACCTAATAATTCTGACGAAGAGCCCTATAGCATTGAACAGCTCTTGTTcgatactaaaaaattatacaacacGTTGAAATTGTTGAACGGCAATCTAACTATTCCACatgatattgttaattatgtacatttaaataGTAGAAAGAAACAActcttaatttctttaaaagatcATTTGAACATAGGAAATAGTGAAGTGCAGAACAATGAGGTAATAGAACAATTTCGAACGAAGATGTTCGGCAACGCCACGGAAGGTGATAACAGTGATTTTTTCATACCGCCACTTCCGTTCGGTGGATACATAAggctaaaaaaaagtagaaaacgAAATACGTCTACGGACTACGATTTagatgtgaataaaaaatttcttattgacCTACCTATACATTTCTCTGTAAGTAAAGGTATACTTGATTTCATTAGCATTGACGAGGTTATTCAATTTGATAGATTCAGTCAACTCTTAATAAACGATTGTCATAATTACGACCAGCAAAATGCACGTttgtttaattcattttttaaacgcaACGTCTTACGTTTAAAGAAAGATCCAGACAACATTTCAAATAAAGCTTCGTCAGAATATAATGAATCAAATGTAAATACGAACGTGGAAGATTACGAGCGGCTAAATGAGCTGAGAGAAACTGTCAGTATTAATGAAGCAAATGAAACGGAAGTGAGTGATATAATTCTACCGAATCGAGCAACTTTATTAGGTTGGAAGAATCTGCTTCTTTGGAAATTACTGTACGAGTGTCAAGACGAAGTTCGTCAAGAGGTTCAGCAACAATGCGAATCGATCGCGCGATACCGTGGATTTGGAAATGATAAAGTATCGAAGCAAACGGCAACGAATTCTCGATTATCTGCGGAAACAAAGAGTGTCCAGTATCAGTTACTGCAAACTCgcttattacaattatttaaacttcCCATAAGTTTGTCGAATACTACATTAAAGGAAGAGATGGAAATGATATTTCAAAGAGATAAGATAGCCAAACAagatgttttgaaaaaaagaaaacggaaAGATACAAGAACacgaagaattaaaaagatgcATTTAAGCAATTATAGCGAAGATGAAAGCGAAGATGAAAGTGAACGTATCGATCCACTTCGCATAGACGTTACACCGGAAACCCTTTCTACATAA
Protein Sequence: MSESDDSDILADIQALDEALALGVKPVLQCPSQHSDDSSSSHNFDDLEDNADCLNYLSENQCIDESLNAYEINTRLITGLTIAKKKLTTLLEICEKKIQLLDERMESKEGWNSSSRTKLNNAGIPYFKDKNYFSAPKNDDTKLKEARNELSLFSLKKPNRWSRRDRETLLAAIHNQAIESVLSGENDKKPDPSTSDNQAEKDKFVLPRNFNEMVEAMGEKDFDWYKISITDFNNKHSPGECRAMWNVYLHPNIEKSEWTSEEDKKLLKCVKEYNYQDWDAITQKLGTNRSAYQCFIRYNTIKKVPSSGHAWTRQEDKHLIKIVNTIRVGDYIPWAEVSNHMRHMTKQQVYVRWMYSSAPHLKKGRFNKAETSTLLKAVRKYGTNFSKISSIVMPHRTSVQLQLRYETVMMNIKNEFSNLWTVNDDLKLINLHTKYKNDWSKISTYFSRKSRTQVRHRYYAIVRYTMRGISIENIPRPVSTYLRFKKITINKKLSSHNMPKCPLEKPKQYSISVFEIQLRLYETLSFPPSVRPNNSDEEPYSIEQLLFDTKKLYNTLKLLNGNLTIPHDIVNYVHLNSRKKQLLISLKDHLNIGNSEVQNNEVIEQFRTKMFGNATEGDNSDFFIPPLPFGGYIRLKKSRKRNTSTDYDLDVNKKFLIDLPIHFSVSKGILDFISIDEVIQFDRFSQLLINDCHNYDQQNARLFNSFFKRNVLRLKKDPDNISNKASSEYNESNVNTNVEDYERLNELRETVSINEANETEVSDIILPNRATLLGWKNLLLWKLLYECQDEVRQEVQQQCESIARYRGFGNDKVSKQTATNSRLSAETKSVQYQLLQTRLLQLFKLPISLSNTTLKEEMEMIFQRDKIAKQDVLKKRKRKDTRTRRIKKMHLSNYSEDESEDESERIDPLRIDVTPETLST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -