Mpha023914.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Monomorium pharaonis
Gene Symbol
ARID5B
Assembly
GCA_013373865.1
Location
CM023794.1:11727239-11740288[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-22 6.4e-19 68.9 0.0 1 89 294 380 294 380 0.95
2 2 7 3.1e+04 -3.9 0.1 7 31 692 717 691 719 0.65

Sequence Information

Coding Sequence
ATGGTCGCCTGGCGCCGCAAGTGCGAACAAAAACAATCGATCAGCGGAATCGTGCTCGGCAAGTCGAATAACCGTCTCCTCGGGAATTGGATCGGGCCCATCGCTAGCGCCGGTGCCGCCGGTTGCGAGCCGAAGGGAGAAGAGACGAGAAACACACGTCGGGGAGTACCGCGGGCGAATAAGTGGGGACGACGGAATGAGGACGAGGTGCTGACGATTTCAGAAAAAGTAGTCGTCCGCGTGCACGACCTAGTCACATGGCTCTCACCTACGTTAGAATGGTCGTGGGGCCGGGAGGTGTCCTATCCGACAACCCCGACGTCGTCCCCGGAGACCAGTCCGCTCAGATACGAGATGCCACAACCGCAGGTGCTGACGGACCCGGGGATCGACTTCTCGGACGTGGACAAGCACCAGAAGGACTACGAGACTAACCTGAACTCGTCGAAAAAATTGGACGGCTTCCAGACGAAGGTAGTGGTACTCTCGTATCCCAGGTACTGCCGTTACCGGGCGCTCCTACGTAGACTCGAGGGTGCCGAGCCGTCCTGGCTGTGCTCGTCCATCGCCGCCGCCTTAGGGGGCTTTACCGCGACCCCCGGCACCAGGGTGCTCTTCTGCAGGGACACATTTGACTATCCGGATCTCGAGACTCACGAATTGCTGTGCAATCACTTGGCGCCAAAGTTAAAGGGCAGACCACGAAGAAAGCGTAAAAAGCGCAGCGCTTCGCCAGGCGAATCTTCGAACGAGAGCGAAGCATCAGTAGCGTCGACGTCGAAGAGCACGTCGGCGGCCAGCAACACCAGCTTGGTGATTCCCACAGTTGGGAGGCCGCCTTCGTCCGGGGTACGGCGGAGTGATAGGAAGATCAGCGTGGAAGAAAAGAAGTTTATCACCGACGTGCACAATTTTATGAACTCTCGGGGTAGGCCGATCGGAAAGATGCCACTGCTGGGCTACAGGCAGATTGATCTGTTCCTGTTTTACACGAAAGTGCAAATGCTCGGTGGTTACGATTCCGTCACTGCTGGACGTCTTTGGAAAACTATCTACGATGACATCGGTGGCAACACGGGTTCCACTAACGCGGCGACTATTACACGTCAACACTATGAAAAattattattattgtatgaaAAGTATCAGCGAGGCGAAGAGACAAAAACTTTATTCTCGAGTGAGAAACCCAAAGCCGAAACCGGTGGCAAGACATCCTCGTTACGTAGCGTGCGAGTAAAACCGGAACGCCTGAAGTCCTTGAATACAATAATCGCCAATAATGCGACACCTTCCAGCCAGCAAGCTAGCCAACTGCCAAGTCCACCGCCATCCTCCAATGCGTCTATCTCAACGCCCAATAGCACACCCTCCACCACGCCGACGAATGGTACCAGTAACAATCAGAGCGTCTTGGAGCGGCAGCTCAACAGTCCTTTAATATCCCAACAAGTTCCACCGTCGTGTTCGCCACCAGGCTTGCCCGTGACTAGTGTACCGACGAACGCGTCGACGGTTGTCACTTTAACGCCTCCGCCGGAAAAGGATATGAAGGAGATCAAATTGGATCCCAAGCAGACGACTCTACTAGCACAGGGGAAGGAAAACATACCACTGTTCAGCGGCGAGAAATTTGCGGAGAAGACGACGGTACCGCCGGTTTCTAGTAGATCGCCCGAGGTGATCGACCTTGAAAACGAGAGTGACACAAGTCGAGACAAGATAATCATTCCCAGCTTCAAGAAACGTAAACTCGAAATTTTGCGAGAAGGCGGTCTTGAGGTCACCGCCGTCGAACTGGAAGCACGACCAAGCGTGATTCAAAGCAACGTCGGCATGTCGCCGCAGCATCACCATCACCAGCACCACTATCAGCAGCAGCAACCGTCCCCCTTACCGGCTACAATGAAGTCTACTGAAGAGAGACAACCATCGATCTCGCCGTATCCGCTTCCAGTCACACCCAACTCCATTCCTAAATTAATATCCGTCACTGTTACACCCGACATAGGACACATGCTATCGTCACCGCAAGACCATCAAAATCATCAGCCGCCGCGAATACCAGCGATCAAACAACTACCGGCTcatcataataataacaacattAACATGATGAATAACAATAACGTGACGAATAGTCGGGTGATAAACCTCGGTAGCTCGAACAATGCCGCGCTGTTACAGTTGTACGCGAATGCGAATGTTGTACCGTCTACACAGCAACCAAACCGTTTCGTTCCACCAAATATTCCAAACGGCAGATTATTTCCACCGAAAGTGACGCAATCACGATCGATATTTGTCCATAATGAAAAGACAGTTTATGGAAATCCCAAGGATATTCTTGTTTCTCCACCAAAATACCATTTGTCGCATTTACATTCACAtccgcagcagcagcaacaacgcTCGCAGCATCCGCACATGAGCTCTAACGATATCGGGCAAGGAGGAGCTGTTCTCGATCTGACACAAAAGTCTAGCGAAAAACTGTCGTTCCCTAGGCCCAGTCTAGAAATAGTCAGAGTACCTGTAGTGCAGAGGCCTAATCCGTTAAATCTCGACGTGCGAAATTCACCCGCCAAGGATAAACCGTCGGATAGGCCTGCTGTCGACTGTCCAAAGCAAGTACCTTTTCCCGCCTACCAAAACGTAATCGACAGTCGAACTATTGCGTCGAATAATCTCGAGATTACGTTAGTGAATCCGAAGCACAAAAACAATCACCACCTAAGTATACCGTCTCACGTCCAAATACCAAGTCCACCTAACAAAAGCGGTGCGATAGGAACGATAAATAGCACGCAAAGGAGGCAACCACCACCGCAACAAATAAATGGAAAGTATACGGTGAGAAGCGAGCCGGTTTCGCCATATACACCGAGGAAACCCAGTCACCCTATTATACCGAATGTACCCAATTTAAATCATCTGAATCATCACAGTGCGAGTTCGTGTCCTAGAATGCAAGCAACGACGTtacaacaacagcaacaaaTGAACATCGATAGGAGGAAAGCAACTGCGGAGGTTAGCAGGGATCATCAACATCGTAGGATCAGCGAGGGCGAGAAATTATCCTTGACAgcacaacaacaacaacaacaacagcagcagcatcagcatcaGGAATCCGTCAGGCAGAGCGAGACTGGACGGCGGCATAGTTTACCCAGCATACCATCGGGATTTGTGCCGCAAAACAACTCTACCCCCTTCCCGTTGCCGCAACTGCCAAACGTGTCTGGCAAGTTCCTACCCTCGACAATCCTGAATCCTATGTATTATCCCGCGTTCTACAACGGTTTGTTCCCACCGCCGATTCCGCCCACGACCGCCGCTGCTGCGTCGTCGTTTCTACCGCCGGagtttacatattataagGAGTATCTCGCTTCCTCGCAACCAAGACTGACGGGGATGACGGGGCAGCCGCCACCGCATCAACAGCCGGCCGCCCCAACATCTAAATAG
Protein Sequence
MVAWRRKCEQKQSISGIVLGKSNNRLLGNWIGPIASAGAAGCEPKGEETRNTRRGVPRANKWGRRNEDEVLTISEKVVVRVHDLVTWLSPTLEWSWGREVSYPTTPTSSPETSPLRYEMPQPQVLTDPGIDFSDVDKHQKDYETNLNSSKKLDGFQTKVVVLSYPRYCRYRALLRRLEGAEPSWLCSSIAAALGGFTATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSKSTSAASNTSLVIPTVGRPPSSGVRRSDRKISVEEKKFITDVHNFMNSRGRPIGKMPLLGYRQIDLFLFYTKVQMLGGYDSVTAGRLWKTIYDDIGGNTGSTNAATITRQHYEKLLLLYEKYQRGEETKTLFSSEKPKAETGGKTSSLRSVRVKPERLKSLNTIIANNATPSSQQASQLPSPPPSSNASISTPNSTPSTTPTNGTSNNQSVLERQLNSPLISQQVPPSCSPPGLPVTSVPTNASTVVTLTPPPEKDMKEIKLDPKQTTLLAQGKENIPLFSGEKFAEKTTVPPVSSRSPEVIDLENESDTSRDKIIIPSFKKRKLEILREGGLEVTAVELEARPSVIQSNVGMSPQHHHHQHHYQQQQPSPLPATMKSTEERQPSISPYPLPVTPNSIPKLISVTVTPDIGHMLSSPQDHQNHQPPRIPAIKQLPAHHNNNNINMMNNNNVTNSRVINLGSSNNAALLQLYANANVVPSTQQPNRFVPPNIPNGRLFPPKVTQSRSIFVHNEKTVYGNPKDILVSPPKYHLSHLHSHPQQQQQRSQHPHMSSNDIGQGGAVLDLTQKSSEKLSFPRPSLEIVRVPVVQRPNPLNLDVRNSPAKDKPSDRPAVDCPKQVPFPAYQNVIDSRTIASNNLEITLVNPKHKNNHHLSIPSHVQIPSPPNKSGAIGTINSTQRRQPPPQQINGKYTVRSEPVSPYTPRKPSHPIIPNVPNLNHLNHHSASSCPRMQATTLQQQQQMNIDRRKATAEVSRDHQHRRISEGEKLSLTAQQQQQQQQQHQHQESVRQSETGRRHSLPSIPSGFVPQNNSTPFPLPQLPNVSGKFLPSTILNPMYYPAFYNGLFPPPIPPTTAAAASSFLPPEFTYYKEYLASSQPRLTGMTGQPPPHQQPAAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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