Basic Information

Gene Symbol
Arid4b
Assembly
GCA_013373865.1
Location
CM023799.1:1970223-1994940[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.5e-27 1.5e-23 83.7 0.1 1 89 308 395 308 395 0.95
2 2 6.4 2.8e+04 -3.7 0.0 29 64 1372 1408 1359 1418 0.71

Sequence Information

Coding Sequence
ATGCTGGGAGACGATCCACCGTCGTTGTCGGTGGGTACAGAAGTAAGCGCTAAGTACAAGGGTGCCTTCTGCGAAGCAAAAATTCGTAAAGTAGTGCGATCAGTAAAATGTCGTGTAACTTATAAACAACAAGGTTTGGGAACTGCCACAGTTGCCGACGATCAAATAAGAGGTACTTTAAGAGTTGGTGCCTCCGTTGAAGTTAAACATGTGGATCGAAAAGAGCTTGTGGAGGCTACGATtacaaaaattcaagattGCAGTCAGTATACCGTTGTCTTTGACGATGGAGATATTACGACGTTGCGAAGAACCGCGCTCTGTCTAAAAAGTGGACGACATTTTGCGGAAAGTGAAACGTTAGATCAACTTCCGTTGACCCATCCGGAGCACTTTGGGAATCCCGTGATTGGAGGTAGACGAGGCAGACGATCAAGGCAAGCGCAAGATGAGAGCAGTGAAGACGAGGACAGTCCACCGCGAGGCGCTCGTGACTCGGCTTCTAGCGGAGGCGCGAAGGAAGGAATGGAAACCGAGCCGGAGATCGGGAGAGTAGTTTGTGTGGAACTCggtgataaaaagaaaaaggacaaTTGGTTTCCAGGATTGGTGGTCGCGCCTACTGCTCAGGATACTGTAAGAATACGAGTGAGAGACGATTATCTCGTACGCTCGTTTAAAGATGCAAGATAttataCAGTACCCAAGAAGGAAGCTACGGAATTTACGAAAGAATTagttaataaagttgaaaatagTACTCTGAAAGTCGCAGTGGAAAAGGCGCTtctatttttagagaaaaatgaaTTGCCACCTCATTGGGACAGGGATTCCCTGTTTGGTCATTCTGTTTCTAGTGGGAATAGCGATTACGACGGGGAACTCGATTCAGatAGTTCGGACGACGAACCACGTGAAGAAAAAGATCACTTTGTGGcgcaattgtataaatttatggatGATCGCGGGACACCTATAAACGTTTGTCCGATGATTGGAAGTGAGGACATAGATTTATACCGGCTTTTCCGAGCGGTTTACAAATTAGGCGGCTACAATCGTGTTACGAATCAGAATCAATGGAAAGCCGTAACACGGCGACTTGGTTTCTCAATGCAGAATTCAGCACCTTTGTATAATCTCGTGAAGCAAGCTTACAAGAAGGTCTTACACTCCTTTGaagatttttatagaaaattaggATGCACAATGGTGAATCATCCGCGAGGTAGTACACGTAAGCAGCGTCCTGGAAGAAGCTTGATCCGCGACAAAGATAGAAATACTCCTGTACCACCGCCAGCACCAGCGCAAGTGAAGAGTGACAAGGACGAAGATGAGAAGAAAGCTGTAGAAgatgagaagaaagaaaagaaggaacTGAAGAAAGAACAagtgaaagaagaagaagttgttaaggtaaaaaagaaagaagaatctGAGGGAAATGGTAGCGGTCAAGAGAGCGATGTAAATGTGGAAGGGGATGCCGAATCATCGTCCAATAATGAAAAGTCACAAAAACTAATTGCACAAATTTCCACGTTATCTCCTACTTCGTGTGGTACTGCAACTACATCGTCCAGCCGGACCAAGTCCAAAGGTAAAGAAGACACCAAGAAAAAGGTGaccgagaaaaagaaaacggaaaataaaaagcaagaaaagAAGGACGAAAAGGTCAAAGAGGAAGAAGCTACTAAGACGAGATCCAAAGCGAAAGATGATACCGTAAGAAATAAAGGTACTTCCGAAAGTAGAGAAACTCGAACACCGTCTAGAGAGGCGGACAAGAAAACGGTGTCTAAGCAACGACGTTTAACGGATGAAGAATTAAAGAAGCGTGGAAGGAAACGCAAAGAACATGAAACGGAAAAGTCACGTGCAGATGAGCAACTTACAGAGATTGCTCCAAGCTATAAAGGTCCCGTGGAATGCGGtgacaaattaaaagtatattatggCCCAACGCACGAATCCAAAGTCACCTATGAAGCGAAGGTTATCGAAATAGAGAAGGAAGGTCCGGAACCGATGTATCTTGTACATTACACCGGTTGGAACACCAGATACGATGAGTGGATTAAAGCGTCCAGAATTGCGCAAAATATCACGCAGGCTCAAGGTAAGGTAAAGCGCATCAAAGCGACTCCCAGGCCTCAAACCCCTAGCACAAATTCGTCTAACAATAAATTGAAGAGTGCTTGCAACTCGAATACTAACGTATCGCAGAGCCGTCGCAGGGCACAAAGCGTCGCACCTACTTCCTCTGGCGCCATTCAATCGGCTTCAACATCCACAAATGAAGCGAAGAAGgtggaaaaagagaaggatAAAGAAATGATACAGCCGACCAGATCTACTACTCCGTTGTCTATCGCCAGTTCCAGTTCCAGAACTAAAAGTCCTGCCACACCCGCCAACAGGCCAACCAGAACAACTAGAAGTGCAGACTTATCTGGAGTAGAACATCGTAGGCGCACTAGGAGAACCTCGGGACACACAGACATATCTGTTGCATCGGAAAGCGAGGATAGCGAAGGTTATGAGTCTGATACAATGGAATCCGAGCAAACTAGAACTAGATTAAGAGGTATGGAAGAGAGAAAACGGAAGGAAGCACGAAGAGCAGAAGAGAGAATTAGAACGGATGATGTGACAGTCAGTGATGCTGAGGATGATAAAGATAATTCAGATGAGCCACGTAAAGGTAGGCGTTTAAGAAGAATGCCCGGGAAGTCTCAGGGTATCAAATCCGAACCTGATAGCGATCAAGATGATCAACCGAAGGGTCGAGATTTTGATCTCAATCAAATACGATCTGAATTGAAAGGTTTCGACAAAGCTGTTAAAATGGAAATAGTCAGAATGGAGCCTGAAGATGAAGTCAAGCCGGACGATAAAGAGAACGCGATCACAGCATCGCCTAAATTGGAGAAAACTATTGAGTTACCGAAGATGGAGGTTGTCGAAACGAAAGTGGAAAGCACGGAAGATATATATGAGTTTAAAGAACCAGAGCCGTTCGAGTTTGAAGTGAGAAATAAGAGGGACACCAGTAGcgataaagataaattgaagaaaagagTATTTGAAGACGAGGTGAAGAGTCCGAAGAAGAAGCAAAAAACATTGATCGTGGGATCGGCAACGAAGGAAACGAAATTGGAACCGTCGGAGACCGATTCTCGGAAAAAGCCGAGAAAATTGTTCGGTAAAAGATCTGATGACGCGCACGAAGCGACGACTGCTGCTGCCAGTAAGCCATTACAGGCCACATCGTGCGAGgacatctttaataaaatgtgcGAGCCGTCGTCCGCGTCATCATTTAATCAATTGAAATCAACTGTTGCGGAAGAATCGGGTAACAAAGTGGCTGGTATAAATCTTTTGTTCAATGATTTGCCAGCGGACGATGAAGGTATGCGCGACGACTCCGAGGATCGTCTGATAATATCGGAGACCGAAATATCAGAAACAGAACAAGAGAATGCATTTGCGTATCAACAGGAGATTCCGTTCCAAACTAGCAAGTCGGACACAGCAGAATCGAGCAAGAACGAAGCGGTCGTGACAGTTGAAAGCGTGAAGGAGGAAACGTCGATAATCAATACGGGCGGTAATAATAAACCGGCCAATATCCCGGATCAGAAACAGAATCAAGTCAAATCTCTATCAAGTCAAGTTGCGTCTAGTGGACAGTCGCAACCAGAATTGAAGATGCTGGATACCAAGTTGCTTGATATCGTTCCTATTCCATCGCCGATTGTGACACCGCCAGCTCCCATAAGTGCACGATTGCCGGCAACGTCTACGATAGAAGAGAAGTTATCGGCCGCAATGGCGTTCCGGAGCAAAGTTAAAGATACTAAGAAGACTGTGGATGAGGAGGTACCCGATTCACGCGTAATCAAAGCGATGAAGGAAGGGTTTAAGAAATTAGACTCTGCTTTTCTGCAAAGGAGCGGCAAAGATGCGGATTGCATTACTTCTGCGACCGAAGTGGACAAGAAACAGGAGAAGATCGTGAACGAGGAAAATATACGTAGAGAGATTATGCGCGGGATGGTTTCCAAGCGAAAGGAAGAGGAACTCTCCAAGTCAAAGAAAGAAGCGGAACTGAAGAAGTTCACGGAGGCAATCGCTGAGCACAAAGCCAAGTACCAGGATGCCACAAGAGACGAAGGTTGGAAGAGCACTGGATACGAGATGTCTGGTGACAAGAAACTTGAAGAGGAATATAAAACAATGGATCAGAAGGAGAGGGACAGAATTGAAAGTCGTAAGAAGCAGATCAACCAGGATATCGATTCCACAGACAGCAGTGACTCGGAACAAAGGCTCGTGATAGATAACGAGGAGCTGCAGGACGTCAAAGCGTCGATTACCACTTTCGACGTGAAGTTACAAGCGGAATTGGGTCACGCAATCGAAAATACGCAGGAGAAATATGGGAAGTCGCAGGTGTTGAAAATTTCGCAAAACAGCCatcaacagcagcagcaagaACAGGAATTCAAGGCCGATAATGCGATACTTGCACCAAAGACAGATGAGGAGGGTGAAACGATGAATTCGCTGCTGTGCGAGGAAGAGATACCTGGCTCACCGGCCCCGCTGTCTGAGAGTATCGAACAAGCTAGTGTCGGTCCTTTGTGCAGCCCGCCAAAGAACGAAGCTGCGGAGGACGGCATGGTGCTAATGGAAATGCCTTTTGCGAGCGCACCGACCTCGGGTCAGAGCacgagcagcagcagcactACCTCGGTCGCCACTCTCAGCACGGCATTACCGAAAACTGTAGAGACATCGAAGCTGATTTCGTTGCCGACGCAACAGAACACGTCTTCAAACATGCCACATCAACGGCAGCCACATCAGCAGTTACACCATCACCATCatcaacaacagcagcagcagcatgtGTCGGGTTTGATTTCAACGCAACGACGAGAGAGCAACGAGGCCGCACCAGTGATGGATAATACGCCGCCGACGACACCCGATTCGAGCATCTCTAATATCTCTGGTTCGCCTAGGGAAGAGAGAACCGGCGGTTCATCGCCGATCTCCGAAGAAAATATCAAGCTTAATCGTGATAACTCCGAGGCGGACAATGATAGCGCTGGCAAGGGCCTAGGTTTCAGCGAGGATGACATTTTACCTCACTCGGAGGGCAGTTCTGCGGACAGAATTCTTAAACCGCCCGCCAAACGCGCGGTCGAGGATATGCAATCGCCTAAGAAACGCAAGAGAAACAGAAAGCACTCTGAGTGTGGTAGCAGCGGCGGCGTCAACGTCGATGTTGGTGTTGGTGCCAGCCTTGGTCTCGGTGTTGGCATTGATGTCGGCGTTGGTGTTGGCGTTGATGTTGATGTTAACATGGGCGTTAGCATTGGCGTCGGTGGCACTAGCGGTGGTGGCGTCAACAATAGCAGCAATAGCGTTGGTAATAGCGGTAATGTTAGTAGTAACGCCACTGGTAGTGTTGGGGGCATCGTTCCAAAAAAACCTGGTAGACAAAACGGTAGACACGGCAAATACGGAGCCGGCAGTGACAGCGACGATACCAGCGAGGGATCTAATCTCTGCGGAGTCAACAACACGCCGCCGAGTCACGCCATCAGCACCATCACTAACGTTTCCGATCTCAGTACTTACTCGTCGTCGAGATCACCGAGACcaacgaaatataatttttacgttgAATTAGaTCCTGAATTGGATGGTAGTCAAAGAATAGCTGTGTTACAACAGAAATTAACCGAATTACGGAAGACGTATAACGCTGTGAAGGTTGAGCTCGCTGGTATAGAAAGACGTCGAAAAAAGCTGAGAAGACGAGAACGagaagCGATGAAAGCAGCTAAGGCAGAAATGCAGCAGGCTTGTTCGTGA
Protein Sequence
MLGDDPPSLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQQGLGTATVADDQIRGTLRVGASVEVKHVDRKELVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDESSEDEDSPPRGARDSASSGGAKEGMETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSTLKVAVEKALLFLEKNELPPHWDRDSLFGHSVSSGNSDYDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINVCPMIGSEDIDLYRLFRAVYKLGGYNRVTNQNQWKAVTRRLGFSMQNSAPLYNLVKQAYKKVLHSFEDFYRKLGCTMVNHPRGSTRKQRPGRSLIRDKDRNTPVPPPAPAQVKSDKDEDEKKAVEDEKKEKKELKKEQVKEEEVVKVKKKEESEGNGSGQESDVNVEGDAESSSNNEKSQKLIAQISTLSPTSCGTATTSSSRTKSKGKEDTKKKVTEKKKTENKKQEKKDEKVKEEEATKTRSKAKDDTVRNKGTSESRETRTPSREADKKTVSKQRRLTDEELKKRGRKRKEHETEKSRADEQLTEIAPSYKGPVECGDKLKVYYGPTHESKVTYEAKVIEIEKEGPEPMYLVHYTGWNTRYDEWIKASRIAQNITQAQGKVKRIKATPRPQTPSTNSSNNKLKSACNSNTNVSQSRRRAQSVAPTSSGAIQSASTSTNEAKKVEKEKDKEMIQPTRSTTPLSIASSSSRTKSPATPANRPTRTTRSADLSGVEHRRRTRRTSGHTDISVASESEDSEGYESDTMESEQTRTRLRGMEERKRKEARRAEERIRTDDVTVSDAEDDKDNSDEPRKGRRLRRMPGKSQGIKSEPDSDQDDQPKGRDFDLNQIRSELKGFDKAVKMEIVRMEPEDEVKPDDKENAITASPKLEKTIELPKMEVVETKVESTEDIYEFKEPEPFEFEVRNKRDTSSDKDKLKKRVFEDEVKSPKKKQKTLIVGSATKETKLEPSETDSRKKPRKLFGKRSDDAHEATTAAASKPLQATSCEDIFNKMCEPSSASSFNQLKSTVAEESGNKVAGINLLFNDLPADDEGMRDDSEDRLIISETEISETEQENAFAYQQEIPFQTSKSDTAESSKNEAVVTVESVKEETSIINTGGNNKPANIPDQKQNQVKSLSSQVASSGQSQPELKMLDTKLLDIVPIPSPIVTPPAPISARLPATSTIEEKLSAAMAFRSKVKDTKKTVDEEVPDSRVIKAMKEGFKKLDSAFLQRSGKDADCITSATEVDKKQEKIVNEENIRREIMRGMVSKRKEEELSKSKKEAELKKFTEAIAEHKAKYQDATRDEGWKSTGYEMSGDKKLEEEYKTMDQKERDRIESRKKQINQDIDSTDSSDSEQRLVIDNEELQDVKASITTFDVKLQAELGHAIENTQEKYGKSQVLKISQNSHQQQQQEQEFKADNAILAPKTDEEGETMNSLLCEEEIPGSPAPLSESIEQASVGPLCSPPKNEAAEDGMVLMEMPFASAPTSGQSTSSSSTTSVATLSTALPKTVETSKLISLPTQQNTSSNMPHQRQPHQQLHHHHHQQQQQQHVSGLISTQRRESNEAAPVMDNTPPTTPDSSISNISGSPREERTGGSSPISEENIKLNRDNSEADNDSAGKGLGFSEDDILPHSEGSSADRILKPPAKRAVEDMQSPKKRKRNRKHSECGSSGGVNVDVGVGASLGLGVGIDVGVGVGVDVDVNMGVSIGVGGTSGGGVNNSSNSVGNSGNVSSNATGSVGGIVPKKPGRQNGRHGKYGAGSDSDDTSEGSNLCGVNNTPPSHAISTITNVSDLSTYSSSRSPRPTKYNFYVELDPELDGSQRIAVLQQKLTELRKTYNAVKVELAGIERRRKKLRRREREAMKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00128745;
90% Identity
-
80% Identity
-