Malt034881.1
Basic Information
- Insect
- Monochamus alternatus
- Gene Symbol
- pnr
- Assembly
- GCA_037114965.1
- Location
- CM073433.1:2758625-2767428[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3 6.6e+03 -1.7 0.0 7 14 201 208 199 213 0.79 2 2 1.5e-17 8e-14 52.4 4.4 1 35 331 364 331 365 0.98
Sequence Information
- Coding Sequence
- ATGTGCCAGTCCGAAAAAGTCCTCGACACCCTCACCGCATCTTTGCCAATTAACCCAGAAGACTTAAAACTAGAACCACCCGAATTACCTTGCAGTATTACGAATGAAGTCAAGCAGGAACCCGAACTCACTATAACAGCAATACCACGTGAACCCGAAAACCCGCCACACATAGACAATAATCAGCAGCACCCGCTCCCCGAACCCTCCAGGGAACACTTGCCGGACTCCACGAGGGAGCCTCTAATAAAAGTCAAGTCTCCCAGCGTTCTACAGTACAGCCTGGAAGAGCAACCAATCGTCGCACCTCCAAGAATCTTGAACCAGGACGTGGCCAACTTCTTGGACAGGCAGCAGGAGATGGAGGGAAGGATAAGTCCCGTGGAACCTGCGGATTTGTCAAATAAGAGGCCAGAGAACGTCACTTGTGTTCCCGAGATTGATTTTATTAAAGAGGAGAACGATAATGCTTCTGTTTATAGCAATAGTTCAGACCCCGAAAGGTTGGAAGTTGATATGTCGCAGGCGACGGAAGAGCACAGCAACTCCACAACCCGAAGCGGGACCTCCCCCATCCCCGAACCAGTCAGGGAAAACGAATCCGACTCGTCGTTATGGCGTGCTTTCTCCCAGAACGGCTACAACCCTTCCAACCCTCTGTCAGGCGAAGCGAGTCAGTTACTTAGGAAACTCATAACCTGCCGGAGGTTAGGAATGAGCATCACGCCCGCGCCGCCCCACGTCCTCAACTACACCCTCTTCCAGGACCAACAGAGGTCGATGCAGTCGCAGGGGTTAAATATGGAGAAGAGCTCGGCCAGGAGGAAGCAAAGCTTTCCGACGAAGGCCAGCGTACAAGTAGAATCGACCCCCATGGAACAAGAGAAGGAAGAGGAGGATTATATTCCGGATTTCACCGGAAATAATCCGTGGTGTAACCTGGTAAAAGGAAAGGGTGGGCCTGGTATGGCGAGAAGGGTGGACCTTTCATGTACTAATTGCGGCACACAGACCACAACGATCTGGCGACGGAACATGAGAGGCGAGATGGTTTGTAACGCCTGCGGACTGTACTATAAGCTTCATGGCGTAGACAGGCCGCACACCATGCGAAGAGACACGATCCACACTAGGCGCAGGAGGCCTAAGGCTCCGGAATTGAAAGATAAGTGTAAAGAATACAGTTCATTCACAGGACCTATAAAAACATACAAAGGTAAGCTTCTGAAAGCTATAGCTCCGAAAGAAAAGGACGTTAACACGATGGAATCGACAGACACCGAAGACATGTTAAGTGCATTAAGGAGGCAGATCCAACCGCACCTCGTTATGGCTCTACAGGGGCACAAGAATCCAAGTGCTCCAAACTTCCCACGTTTACAGGGTCCCCCGCCTTTGTCGAAATTCTTGCCTACAGGAGCGTCCCCGAGCGGATCTGCTCCCGAAGTAGACTCTGACGAAGACAGTATAGCAGATCTGCCCCTGAACCTCGTCTCGACGCAGATGACGGAAGCAGAACTCCATTAA
- Protein Sequence
- MCQSEKVLDTLTASLPINPEDLKLEPPELPCSITNEVKQEPELTITAIPREPENPPHIDNNQQHPLPEPSREHLPDSTREPLIKVKSPSVLQYSLEEQPIVAPPRILNQDVANFLDRQQEMEGRISPVEPADLSNKRPENVTCVPEIDFIKEENDNASVYSNSSDPERLEVDMSQATEEHSNSTTRSGTSPIPEPVRENESDSSLWRAFSQNGYNPSNPLSGEASQLLRKLITCRRLGMSITPAPPHVLNYTLFQDQQRSMQSQGLNMEKSSARRKQSFPTKASVQVESTPMEQEKEEEDYIPDFTGNNPWCNLVKGKGGPGMARRVDLSCTNCGTQTTTIWRRNMRGEMVCNACGLYYKLHGVDRPHTMRRDTIHTRRRRPKAPELKDKCKEYSSFTGPIKTYKGKLLKAIAPKEKDVNTMESTDTEDMLSALRRQIQPHLVMALQGHKNPSAPNFPRLQGPPPLSKFLPTGASPSGSAPEVDSDEDSIADLPLNLVSTQMTEAELH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00111245; iTF_01228074; iTF_00722710;
- 90% Identity
- iTF_00111245;
- 80% Identity
- -