Basic Information

Insect: Monochamus alternatus
Gene Symbol: -
Assembly: GCA_037114965.1
Location: CM073434.1:5906284-5913001[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.27 20 7.4 0.1 2 23 316 338 315 338 0.88

2 16 4.4e-05 0.0032 19.3 0.1 1 23 397 420 397 420 0.97

3 16 8.1 5.8e+02 2.7 0.1 1 23 458 480 458 480 0.93

4 16 0.0016 0.11 14.4 4.6 1 23 545 568 545 568 0.96

5 16 0.047 3.4 9.8 2.1 2 23 575 597 574 597 0.95

6 16 0.002 0.15 14.1 3.3 1 21 708 728 708 729 0.95

7 16 0.0097 0.7 11.9 1.5 2 23 741 763 740 763 0.92

8 16 0.79 57 5.9 0.9 1 23 766 789 766 789 0.95

9 16 0.054 3.9 9.6 0.4 3 23 796 816 794 816 0.96

10 16 6.2 4.5e+02 3.1 0.2 1 23 820 843 820 843 0.95

11 16 8.1 5.9e+02 2.7 0.4 2 23 850 872 849 872 0.89

12 16 0.12 8.5 8.5 0.5 2 23 881 903 880 903 0.94

13 16 3 2.2e+02 4.1 0.4 3 19 910 926 909 927 0.97

14 16 9.1 6.6e+02 2.6 2.9 2 23 1109 1131 1108 1131 0.93

15 16 7.5 5.5e+02 2.8 0.2 2 23 1138 1160 1137 1160 0.88

16 16 1.3 93 5.2 0.9 1 23 1173 1195 1173 1195 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.27	20	7.4	0.1	2	23	316	338	315	338	0.88
2	16	4.4e-05	0.0032	19.3	0.1	1	23	397	420	397	420	0.97
3	16	8.1	5.8e+02	2.7	0.1	1	23	458	480	458	480	0.93
4	16	0.0016	0.11	14.4	4.6	1	23	545	568	545	568	0.96
5	16	0.047	3.4	9.8	2.1	2	23	575	597	574	597	0.95
6	16	0.002	0.15	14.1	3.3	1	21	708	728	708	729	0.95
7	16	0.0097	0.7	11.9	1.5	2	23	741	763	740	763	0.92
8	16	0.79	57	5.9	0.9	1	23	766	789	766	789	0.95
9	16	0.054	3.9	9.6	0.4	3	23	796	816	794	816	0.96
10	16	6.2	4.5e+02	3.1	0.2	1	23	820	843	820	843	0.95
11	16	8.1	5.9e+02	2.7	0.4	2	23	850	872	849	872	0.89
12	16	0.12	8.5	8.5	0.5	2	23	881	903	880	903	0.94
13	16	3	2.2e+02	4.1	0.4	3	19	910	926	909	927	0.97
14	16	9.1	6.6e+02	2.6	2.9	2	23	1109	1131	1108	1131	0.93
15	16	7.5	5.5e+02	2.8	0.2	2	23	1138	1160	1137	1160	0.88
16	16	1.3	93	5.2	0.9	1	23	1173	1195	1173	1195	0.95

Sequence Information

Coding Sequence: ATGGAGACCAAATTGTGTAGAATATGCGGGAAATTGGGACAGGActttatacacatttttaaaacggaagggttaAGAGACAAAATAGAAACATGTTTACCAATTATTgtGTCCCCTTATTGCTTGCTACCAGATACAATATGCGGGGAATGTACAGAAAATGTAGacagtttttacatttttatgaaaaagtcGCTTCAAAATATAATCATTTTGGAAACTCAGTATGATATTCAAGAATCTTGCCTAAAATCTAAacgaaaaaaagaaaaaggctGTTACGTAGATTTTACATATAAGACGAGTAATATAGGTGTTCAGACTGAAGATTATCTTGATGTTTTAGTTGGCAAGGATGCAGATTTGAAAGAATacagtttaaattttcctctaataacaaaatttctagACTCTACAAACCTGTTAAAACCAAAATCGAATACATGTTTAGTCGACTACGATATTGATTCAGATTCTAATATAGATGACAGCGATTCCAACACAGGCAAGGTTGTTCTAGGAGAAAAATTGGAGACGTTTAGCAGAATAACCAATTTTGTCGACTCATTTTTATCCCAAAAGAGTCATTTTACTGCAAAAAAGCATTACTTTGACGATGCCGAAAATGATTTGATCTCAGAAATATCTCAGCGGAAAAGCTTAAAGCGTAAATGTGATTTGATTGAAACGACTCGaacaaaaatatgcaaaatggaCAACTTTAACAGAAGAAAAACTAAACAGCCGAGAAGATTAGAGACGGTAGTTGCAGGAATCggcaaaaatttgtttttcaattcAGAGATCTTTGCTACAACTCGCCACAATGAGAACGAGAACAGCTCTTTGAACGATTTAGAAAAAAACGATTCTCCGAATAGCGACAATGACAATCAACAGAATGTTTCTATTCAGgGCGAAAAGTTATTGTCTTCTTTACCACAAAGTTGTTTACTGTGCGATACTCATTTTTCTGGACCAGCTGCTTTAGCCGCACATGTCTTTGAAACGCACGGAATAGATTTGGCCGAAGTCGTATCCTCTGGGTCTGGAGAATCGTTTCCAGAAaagaacaaaaagaaaataccaaatctggTCAAGATTTCGGATCTTAAGAGGAGCGATTCCATAGATGACAACCAGTTACCAGACCAGCAGCCCGAAGACCCGCCTATGCTTCTTCCGAGCTTCGTGTGCCCCAATTGTCCCGCCGTTTTCACAACCAAACCCGACCTAATGATGCACCTAAGGGTTAAGCACGCCCAACAAGCCGCGCACCTCTGTGGCTTGTGCTTGCAGCAGTGCAACACGTACATGAACCTTAAGAGCCACCTCCAGGTGTGCTCGCAGCAGCACCCCGTCAACACTAGATACATTTGTCAGGTATGCCAGTACGGAGACGACAACTTTAAATGGCTCGAGAATCACATTCTGGTGCACGACTTTCTTCTCGAAGCTTGTAAGAAGCAATCGAAGATGTTTGACCCCGCTGATTACATCGACGCTAACGAGAGCTTCGAAAACGGAGCTCCCTCGCCGGGCTCTAAAAGCCTGGCTTGCAGCGAATGTGGTTTGAATGATTTCGAGTCATTTAAAGAGTTTAGTTCACACAGACGCAGCCAGCACTCGATTTTCCACTGCGATCTCTGTAATAAGTTCTACGGGCGGAATTCTCACCTTTGGAAACACGTAAACAGGCTCCATAAGGGACATCCTAGCATCACTTGTCAATTGTGTTACAAGACTTCCGCTTCTAAGTACCACCTCGCGCAGCATTTCAACAAGATTCATTTAACCAAAGGTACGAAGCAGAAAACGGAGAGTTTGCAGTCCGAAAAGGAGGACTTCATGGCGCAAAAGTTTCAGGGCTTCGACTTTCAGTCCGTTAAGCAGAGCTTCATGAGGCAAGAGATCTTGGAACGGGAGCGGAAGAACAGCTTAAGTGAAGTCGAGGATAATTCTAACCAGTTGTCTGACCAGGATGACGAGTTGATTTTAGAAGGGAAAGGGGAATCGTTGATTATTAAAGAAGAAATCGCTGCTCCGAAGGAGATCGATTCGTCGCACAACCTGTACACtaacattattacaaattacACTCCTCCACTCAACGAAGGCGATTATAAGTGCCCGAAGTGTTCCAAGGCGTTCCACAAGAAGGTGCTGCTGAAGAAGCACAAGAAAAACTGCAGGCCCAAGTTGCAGAAGGACTTGCTGACGCGGTGTAAAACCTGCGCAAGGATATTCAAAGACCGTCAGAGCCTCACGAAGCACTTGGTGAACTATCATTCTGAGTACATCTGCGAAATCTGCAACGAGAAGGTTCAGAGCAAGTGCGAGATTGTCTCTCATATAAGATTCCAACACCCCGGCTGTCATTTGTTCTGTAAGGTGTGCAGCAACATTCTGCGGAGTAAGGAGGACCTCCAGGTACACTTACGGGACCACATGGACTCGTACGTGTGTCAGTTTTGCGCGGATTCGTTGCCCAGCAAGATAAAACTCAAGATGCACATCCTCAGCCTGCACCGCAAAATTCTCAGTCTCTCCTGCGGGATTTGCTTGAAACTGTTCGAAACCCAACACATACTGAAGGACCATGTAACTTTAATCCACAAAGACCAACTCACTCCGCTCACGTCTTGCCCAGTATGCGGTAAAAATTACGGATCGAAATGGAAGACATACGACCACCTGAATAAGTCTCACGGAAGGATCTTCAAGGCCTGCAAGACTTGCCTTGAGGTGTTTGATAACGACGCTCAACTGCAGGCACATTGCGACGTTACTGCTCATGGTGGACAGGGAGTCAGCGGTATCGCCACTACTGCGGTCAGGAACAGTATTATGGCCCATATTACTACTGCGATCAATGAAGTTGTCACACAAAACGACATAAACGTTCATAACGACGAAGACGAAAGCGATAGTGGTGAAGAAAACGATGAGAACAGCGATCAAAGCAACGATGAGTACGAGAACGACATAGACGAACCAAAGGAAGAACCAACGCCTGTGTTACCACAAGAATCTAGAATTTCCTTATTGGAAAAACGATTACTAGGAAAGAAAATCTCCGAGGAAGATCAGATTGTAACGAGACCTAGAACGCAGAGTTTGCTAAGCAGCAAACGGTCCAACGGCAGCACACTCGAAAATAAATTGAGACATTCCggtgaaattaaaaaagaaaaaaatcaaaccgaCGTCTGTTCCGGAATGAGTATTAAAAAAGAAGATGACTCGGAAATAGTGAACTCTCCATCCAACCCGCAGGTGAACTCTTCGAAGAGGACGGTTTACGTGAACAGCAACGATCCATCCTACTGCGAGATATGCTTCAAGACGTGGCCGGCCAAGAAGCATTTGTGGCAGCATTACATACGTTGCCACAAAAGCGTGGCCGCTACGGTTTGCGGTATCTGTTTAAAAACCAACGACAGTTACGAAAGCCTCCAAACACACCTCCTTGAAAACCATCCGACGCTCTTACACGGCCAGGGCTTCGGATCTAACTTCATATGCAGGATTTGCGGACGTTACCATAACGCTAGTTCTAAGCTGCGCCTGCACATGGTGATTCACGAAAATTTCGACTGGAGTATGATAAGCGATCCGCCGAAACCTCTGAAACAAGAATGCGAAAGCAAGACGGGTACCAACGGGTTTATAGAAGTCAAAGAGGAGCAACCGAACGACAGTATTGAAGTGTACGACGAAAACGATATTAACTACGAGAGTCTCATCGAGCAAGTGGAATGTTCCTCTCAGTCTGAAAATGAGGACTCGGAAAACGAACAGTCGCACATCGAGATTAAGGAAGAACAGGTCTCGTCATCggaggaagaagaagaagacgaggaCGATAGCGAAGAGTCTGCCTTGTCCGAGAACTCCATGCAGGCGCAGATGTTGAAGAACATGATAAAGGAGAAGCAGAAATTAATCGGGAACGTTAACCAGGAGGAGTTATCGTCAAGCGAAGACTCCAGCTCCAGTTTTACCGATGATAATAACGAGGGCATCAAAAGCGAAAGCTCCGAAGATGATGAGTGTTCCCAAGAATCCCAATCTGTGTCCTCACACAGTAAATTTAACGCTCGCTCCAACTCCAACACGGCCGATTCCGTGTTGAACGGAAACTTATTTAAACGAAAGCCAGACGAGCTGGATTCCGCGATCAAGTCCATCAGTTACGAGTGTATGGAACCTGAAGATATTAAAGTCGAGGATGATTATTGCGAGCTGCACAATAACTGTCTCAATGAGAATGAAATCGAATCGGCCGTCGGTAGTATTCTTTAG
Protein Sequence: METKLCRICGKLGQDFIHIFKTEGLRDKIETCLPIIVSPYCLLPDTICGECTENVDSFYIFMKKSLQNIIILETQYDIQESCLKSKRKKEKGCYVDFTYKTSNIGVQTEDYLDVLVGKDADLKEYSLNFPLITKFLDSTNLLKPKSNTCLVDYDIDSDSNIDDSDSNTGKVVLGEKLETFSRITNFVDSFLSQKSHFTAKKHYFDDAENDLISEISQRKSLKRKCDLIETTRTKICKMDNFNRRKTKQPRRLETVVAGIGKNLFFNSEIFATTRHNENENSSLNDLEKNDSPNSDNDNQQNVSIQGEKLLSSLPQSCLLCDTHFSGPAALAAHVFETHGIDLAEVVSSGSGESFPEKNKKKIPNLVKISDLKRSDSIDDNQLPDQQPEDPPMLLPSFVCPNCPAVFTTKPDLMMHLRVKHAQQAAHLCGLCLQQCNTYMNLKSHLQVCSQQHPVNTRYICQVCQYGDDNFKWLENHILVHDFLLEACKKQSKMFDPADYIDANESFENGAPSPGSKSLACSECGLNDFESFKEFSSHRRSQHSIFHCDLCNKFYGRNSHLWKHVNRLHKGHPSITCQLCYKTSASKYHLAQHFNKIHLTKGTKQKTESLQSEKEDFMAQKFQGFDFQSVKQSFMRQEILERERKNSLSEVEDNSNQLSDQDDELILEGKGESLIIKEEIAAPKEIDSSHNLYTNIITNYTPPLNEGDYKCPKCSKAFHKKVLLKKHKKNCRPKLQKDLLTRCKTCARIFKDRQSLTKHLVNYHSEYICEICNEKVQSKCEIVSHIRFQHPGCHLFCKVCSNILRSKEDLQVHLRDHMDSYVCQFCADSLPSKIKLKMHILSLHRKILSLSCGICLKLFETQHILKDHVTLIHKDQLTPLTSCPVCGKNYGSKWKTYDHLNKSHGRIFKACKTCLEVFDNDAQLQAHCDVTAHGGQGVSGIATTAVRNSIMAHITTAINEVVTQNDINVHNDEDESDSGEENDENSDQSNDEYENDIDEPKEEPTPVLPQESRISLLEKRLLGKKISEEDQIVTRPRTQSLLSSKRSNGSTLENKLRHSGEIKKEKNQTDVCSGMSIKKEDDSEIVNSPSNPQVNSSKRTVYVNSNDPSYCEICFKTWPAKKHLWQHYIRCHKSVAATVCGICLKTNDSYESLQTHLLENHPTLLHGQGFGSNFICRICGRYHNASSKLRLHMVIHENFDWSMISDPPKPLKQECESKTGTNGFIEVKEEQPNDSIEVYDENDINYESLIEQVECSSQSENEDSENEQSHIEIKEEQVSSSEEEEEDEDDSEESALSENSMQAQMLKNMIKEKQKLIGNVNQEELSSSEDSSSSFTDDNNEGIKSESSEDDECSQESQSVSSHSKFNARSNSNTADSVLNGNLFKRKPDELDSAIKSISYECMEPEDIKVEDDYCELHNNCLNENEIESAVGSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01227930;
90% Identity: iTF_00111173;
80% Identity: -