Malt028123.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Monochamus alternatus
Gene Symbol
MLXIP
Assembly
GCA_037114965.1
Location
CM073431.1:8368143-8393798[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 6.7e-05 0.0048 18.7 0.2 1 23 887 909 887 909 0.98
2 5 1.6e-06 0.00012 23.8 0.5 1 23 915 937 915 937 0.97
3 5 2.8e-05 0.002 19.9 0.5 2 23 944 965 943 965 0.97
4 5 2.1e-07 1.5e-05 26.6 1.1 1 23 971 993 971 993 0.99
5 5 6.6e-07 4.8e-05 25.0 0.5 1 23 999 1021 999 1021 0.99

Sequence Information

Coding Sequence
ATGTATACAATTCAACATGTTCATCGTCCAGAAAAACCAGAAAAGGAATCTATCCACTCAGGACATTTCATGGTATCACACTTTGAAGCTGAGGAACAAGACGATGAAGACAATGTTGCTATACCAATCCCAGAGGTTACAGATACAAAAGCTATCGTACAAGTCAGGTCACAAAAGCAAGGATCCCTCATTGATTATGTGGAAAATAGAAAAAACCAGCAGCAGCTTGCAATTGATACGAGTTTGTCTAAACTCTTTCAGTGCATGTCGTTAGCCTACagacaaaaGTTGACATCACCAAAATGGAATAGATTTCGTGGTATAAGACTTAGATGGAAAGATAAAATACgattaaataatgttatatgGAGATGCTGGCATTTGCAGTtTATAAAGAAAGAGAATACTTTGGTATGCCAGTTTGCTTCTCCACTTGATGTCGACACACATAACAAGCCTGAGgcCGTTGTTCTGGAAGGAAAATATTGGAAGAGGAAGTTAGCAGCCGTAACAGCTGAATACAAAAGATGGCGGATGTTTTATCGAAACAACCTTTTGGGCCACATGGCCAGAGATATGACAGATACGCTCAGCGACGTGGACTTGCTAGTGTGGGATTCCAACAGTTCGGACAACATGAATATGATGGTGGATGAGGACTATATGGGTCTGATGAGCGATACGTTGTTCTCAACAATCACCAATCAACCATTCGTCTTCCCTGATTCTAGAGAGATCGCTAAAGCGGGTTTGGCCGATTTTATCCAGCCAAGTTTAGGCCCACTTCAGCCTAACCTGGATGACTATATGGATACGCTTGACCCTCTACAAGAGCTTATAAGCAGTAGGCTACCAACAGTGCCTGAAGAAAGTCAATCTAGCCAACAGACACAGCAAACGCTGACCTGGGGATATATAGATAATTCTTTGTCTTCCACCACAACCAACTTACAGGTATCTACATTGTCGTCATCTCAAATAAACCAGTATCAGCTCCAACAGATACAGCAGATGCCGGTAGAGAAACAGGTTCCCATCCAGGACACccggcaacaaaatatccagacCTACAGCAACATGATCCTTCAACAGCCCATAGAACAGTACGTTACCCATCAGAGTCAGCCGCCACCTTACTCATCTGTGATCTCAAAAAATACCAAACCCATGAAGAATGTGTCTCAGACCAGGGGGAAGCTTCAGCAGAACATCCAGACTGTCTACAGCAAATCTATGGATAATATTTATCCGGCCTATTCACAACAGAGCGTCTCCAACCAGATTATGGTCAGCGATCGAATATGCCttcCAATGCAAGAATTGAAAGATGCGGCAGAGTCTCAACAGCAGAACCAGCAAGCTCAACAGTTGCAggagcagcagcagcagcaattCCAGAAGTTAGTACAAGCATCACAGGAGAGCAGACAGGTGCAGGGTTATAAGTTCTCTGTGCCGACGACACCTAATATTAAGTTCACATCACCCCAGCAGGTACAGCACTCACAAATGATGCCACCTTCCTTCTCCTCACTTTCTCAGTACAATGCTTCTCACCCTcTAAAAGATGAAAAACCAGATCTTAGACGACGTGGAGCTCCTAGAGGAAGAGGCAGGTCGAGGTCCAACACGAGGGAGCCTCAAAAAAGACCACCCCTCATATCCGCCATTAGCGACCCTTCCCTACTTACACCGCAGACTAGTGTCTTACTAACCCAATTGCTCACAAATAgcactgatgtTAACAATTCCCTCTACAGCCAGAGCGAAAACTTGGGGTCGAATCAGTCAAATCAGATACGTATAAAAGAAGAGACGAATTCTGTCCCTATCTTACCTCAACCTCCCCCTTCCACTTTAATTATTCCCGCCCAAGTTACTATTAACACCATTCAACCCTCCACGTCTGACCCGTTATCTCTGGGCAGTTCGTTCAGTAACTGCGAGAGCCCGGTGCTAGATGCTACCTCACAAAATTTACATTCACCGACATCATCACAGGGCTCGATGGGTTCGCCCAATAGGGAGTCCTCCCACCGAGACAGGAGAGCCGGGCACATCCACGCCGAACAAAAGAGGAGATATAACATCAAGAATGGCTTCGACATGATCCATTCTCTCATTCCACACTTAAATCAGAATCCTAATGCAAAATTAAGCAAGGCAGCTATGCTACAGAAGGGAGCGGAGTATATCAGGCAACTAAAGATGGAGAGGAACCAACTTAAGGAGGAAATGATTTCGTTACGTCAACAGATCGAGACTTTGAACACTTCCATAAGtaattgtcAGTCTATGCTACCTGCTACTGGGGCTCCCGTTTCTCGAAGAAGAGACAGCAAAATGCAAGAAATGTTTGACGAATATATCAGAACAAGGACCAGGGAAAATTGGAAGTTCTGGATTTTCAGCTTAATTTTCAAGCCTTTGCTGAACTCcttcaataattttgtatcaACTTCCAGTCTTGATGATTTGTATTCATCTACCGTGCTTTGGATTGAGCAACATTGTACTCTTATGGATCTCAGACCAGTTGTTCTTAATTCTCTTCGGTACCTGTGCACAAAGACGGATATTTTGTCAGAACCAGAGAAGTTACCCGAGGAAGCTCGACAGATAGTTCTTAGTAGTAATCCCCCTCAAAGTGAGAAACCCTACAACTGCCAAATGTGTGACAGAAGCTTTGCAGCTCCAGGAACGCTTATGACTCACGTAAGAACTCACACTGGCGAACGACCCCACATATGTAAAATATGTGGAAAGGATTTTCCTCAGTCTGGTTACTTGTCTGCTCACATTCGAACACATACTGGAGAAAAACCAATAGAATGCAAAGTATGCAATCGTAGATTTAATCAAAGTGGAAGGTTGATTGTCCATATGAGAAGTCATAGTGGTGAAAAACCGTACCAATGCACAACATGTGGTAGGAGCTTTGCTGTTAAAGGTACCTTAAAAAAACATATCCGGACTCACACCGGTGAAAGACCTTATAAGTGCAAGGTATGTGGACAAGCATTTTCTCAAAGTGGTACTTTATCTACCCATATGAAAATTCATAAGTCCAAAGTCGGAAGTGACAAAGTAATACATTGGACATAA
Protein Sequence
MYTIQHVHRPEKPEKESIHSGHFMVSHFEAEEQDDEDNVAIPIPEVTDTKAIVQVRSQKQGSLIDYVENRKNQQQLAIDTSLSKLFQCMSLAYRQKLTSPKWNRFRGIRLRWKDKIRLNNVIWRCWHLQFIKKENTLVCQFASPLDVDTHNKPEAVVLEGKYWKRKLAAVTAEYKRWRMFYRNNLLGHMARDMTDTLSDVDLLVWDSNSSDNMNMMVDEDYMGLMSDTLFSTITNQPFVFPDSREIAKAGLADFIQPSLGPLQPNLDDYMDTLDPLQELISSRLPTVPEESQSSQQTQQTLTWGYIDNSLSSTTTNLQVSTLSSSQINQYQLQQIQQMPVEKQVPIQDTRQQNIQTYSNMILQQPIEQYVTHQSQPPPYSSVISKNTKPMKNVSQTRGKLQQNIQTVYSKSMDNIYPAYSQQSVSNQIMVSDRICLPMQELKDAAESQQQNQQAQQLQEQQQQQFQKLVQASQESRQVQGYKFSVPTTPNIKFTSPQQVQHSQMMPPSFSSLSQYNASHPLKDEKPDLRRRGAPRGRGRSRSNTREPQKRPPLISAISDPSLLTPQTSVLLTQLLTNSTDVNNSLYSQSENLGSNQSNQIRIKEETNSVPILPQPPPSTLIIPAQVTINTIQPSTSDPLSLGSSFSNCESPVLDATSQNLHSPTSSQGSMGSPNRESSHRDRRAGHIHAEQKRRYNIKNGFDMIHSLIPHLNQNPNAKLSKAAMLQKGAEYIRQLKMERNQLKEEMISLRQQIETLNTSISNCQSMLPATGAPVSRRRDSKMQEMFDEYIRTRTRENWKFWIFSLIFKPLLNSFNNFVSTSSLDDLYSSTVLWIEQHCTLMDLRPVVLNSLRYLCTKTDILSEPEKLPEEARQIVLSSNPPQSEKPYNCQMCDRSFAAPGTLMTHVRTHTGERPHICKICGKDFPQSGYLSAHIRTHTGEKPIECKVCNRRFNQSGRLIVHMRSHSGEKPYQCTTCGRSFAVKGTLKKHIRTHTGERPYKCKVCGQAFSQSGTLSTHMKIHKSKVGSDKVIHWT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00721731;
90% Identity
iTF_01013969;
80% Identity
iTF_01013969;