Basic Information

Insect: Monochamus alternatus
Gene Symbol: -
Assembly: GCA_037114965.1
Location: CM073434.1:38644356-38656119[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 4.5 3.3e+02 3.5 7.5 1 23 353 375 353 375 0.98

2 27 0.2 15 7.8 1.6 1 23 384 406 384 406 0.98

3 27 0.032 2.3 10.3 2.6 1 23 415 437 415 437 0.98

4 27 0.053 3.8 9.6 3.0 1 23 446 468 446 468 0.96

5 27 0.021 1.5 10.9 6.1 1 23 477 499 477 499 0.99

6 27 0.00054 0.039 15.9 3.5 1 23 508 530 508 530 0.99

7 27 0.00029 0.021 16.7 1.0 1 23 539 561 539 561 0.98

8 27 0.012 0.89 11.6 2.2 1 23 762 784 762 784 0.97

9 27 0.018 1.3 11.1 1.5 1 23 793 815 793 815 0.99

10 27 0.00036 0.026 16.4 1.2 1 23 824 846 824 846 0.98

11 27 0.0012 0.087 14.8 1.5 1 23 855 877 855 877 0.95

12 27 7.7 5.5e+02 2.8 0.2 5 23 890 908 889 908 0.93

13 27 0.052 3.8 9.6 5.2 1 23 917 939 917 939 0.98

14 27 0.0015 0.11 14.4 4.9 1 23 959 981 959 981 0.99

15 27 0.28 21 7.3 2.2 1 23 990 1012 990 1012 0.98

16 27 0.00066 0.048 15.6 0.5 1 23 1021 1043 1021 1043 0.98

17 27 0.0012 0.087 14.8 1.5 1 23 1052 1074 1052 1074 0.95

18 27 0.16 12 8.1 8.5 1 23 1083 1105 1083 1105 0.98

19 27 0.018 1.3 11.1 1.5 1 23 1114 1136 1114 1136 0.99

20 27 0.031 2.3 10.3 2.9 1 23 1145 1167 1145 1167 0.99

21 27 6.3 4.5e+02 3.1 1.0 3 19 1176 1194 1175 1197 0.89

22 27 0.0035 0.25 13.3 3.8 1 23 1217 1239 1217 1239 0.99

23 27 0.19 13 7.9 3.3 1 23 1248 1270 1248 1270 0.99

24 27 0.00027 0.02 16.8 0.6 1 23 1279 1301 1279 1301 0.98

25 27 0.0037 0.26 13.3 2.2 1 23 1310 1332 1310 1332 0.95

26 27 0.058 4.2 9.5 7.7 1 23 1341 1363 1341 1363 0.99

27 27 0.33 24 7.1 2.0 1 23 1372 1394 1372 1394 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	4.5	3.3e+02	3.5	7.5	1	23	353	375	353	375	0.98
2	27	0.2	15	7.8	1.6	1	23	384	406	384	406	0.98
3	27	0.032	2.3	10.3	2.6	1	23	415	437	415	437	0.98
4	27	0.053	3.8	9.6	3.0	1	23	446	468	446	468	0.96
5	27	0.021	1.5	10.9	6.1	1	23	477	499	477	499	0.99
6	27	0.00054	0.039	15.9	3.5	1	23	508	530	508	530	0.99
7	27	0.00029	0.021	16.7	1.0	1	23	539	561	539	561	0.98
8	27	0.012	0.89	11.6	2.2	1	23	762	784	762	784	0.97
9	27	0.018	1.3	11.1	1.5	1	23	793	815	793	815	0.99
10	27	0.00036	0.026	16.4	1.2	1	23	824	846	824	846	0.98
11	27	0.0012	0.087	14.8	1.5	1	23	855	877	855	877	0.95
12	27	7.7	5.5e+02	2.8	0.2	5	23	890	908	889	908	0.93
13	27	0.052	3.8	9.6	5.2	1	23	917	939	917	939	0.98
14	27	0.0015	0.11	14.4	4.9	1	23	959	981	959	981	0.99
15	27	0.28	21	7.3	2.2	1	23	990	1012	990	1012	0.98
16	27	0.00066	0.048	15.6	0.5	1	23	1021	1043	1021	1043	0.98
17	27	0.0012	0.087	14.8	1.5	1	23	1052	1074	1052	1074	0.95
18	27	0.16	12	8.1	8.5	1	23	1083	1105	1083	1105	0.98
19	27	0.018	1.3	11.1	1.5	1	23	1114	1136	1114	1136	0.99
20	27	0.031	2.3	10.3	2.9	1	23	1145	1167	1145	1167	0.99
21	27	6.3	4.5e+02	3.1	1.0	3	19	1176	1194	1175	1197	0.89
22	27	0.0035	0.25	13.3	3.8	1	23	1217	1239	1217	1239	0.99
23	27	0.19	13	7.9	3.3	1	23	1248	1270	1248	1270	0.99
24	27	0.00027	0.02	16.8	0.6	1	23	1279	1301	1279	1301	0.98
25	27	0.0037	0.26	13.3	2.2	1	23	1310	1332	1310	1332	0.95
26	27	0.058	4.2	9.5	7.7	1	23	1341	1363	1341	1363	0.99
27	27	0.33	24	7.1	2.0	1	23	1372	1394	1372	1394	0.99

Sequence Information

Coding Sequence: ATGCAGTCAGAAGACTCTAACAAAAAAACAGTTTGCAGGCTATGTCTTAATATCACAAGCTATACAAATTCCGAAGTAATAGAAGAAGTTACCAGGGAGATTTTAGACGTTGTTTTACCTAACCTGaagTTGGAGGAGGGACATAAACACCTGATGTGTAAAACATGTGGTTCACAATTACTTTCCGCCTTTAATTTTAAGTCGACCTGTATGGGTACTGAGGATATTATTTCTACATATGCTAATTCTAATACCTATTCTATGCCACTGGTTGACTTAACAGAactttatttaaagatgaatgGAAATATTCAATTAACCGATATACGAGAAAACCAGAGAATTTGTCGATTGTGTCTTCAACTGGTGCAATATGAATTTGTGTCATTATATGGAGTGGATAATGACATAATTGATGCATATATACCACTAGTAAACGTCAATGCTACCAAGGATCCTGTTATGTGCGACCCATGTTTTGATTTGCTTCGTACCAACGGCGGTTTTGTAAAGTACTGTCTTGAAGCAcaggaaaattataaatgtgtCAGTAAACAGCCTTATATTAAAACTGAAGAAATTGAACTGGAAGATGGTTGTAATGTGCgacacatatataaaaatattgatgaaCATATTACAACTGAAAAGATGGAAATAAAACAGGAAGATGATAAGGATGTGCAGGaagaatatacaaatattgatgCACcatcttatataaaatttgaagagTTTCAAATAAAACTGGAAGGTAGTAACAATGTTCATGATGAATGTGTAAATATTGATAATCACATGTATATTAAATCCGATGAGATGGAGATAAAGTCAGAAGGAGAAGATCAAGATAGtgattTTCTTTCCCAGGATTCAGATGAGGAAACAATTCCAaacaaaaataagcaaatttCTAAACATATAGAAGAAACAAAGTATGATGGTATAACTAAATGTGAGACCGAAGTTCAAATCAACAAATGCAAAACTCCGTTACATGTATTGTCATGTGAGAATAGATATAAAAGAATGTTtgaaggtgatttaaatctGAAGCACAAATGTAACAAATGTGCTTACAGAACTAAATGTAGCAGTAAGCTGAAACGTCATCAGTTAatacacaaagacccttctgaagtccaaatgtacaaatgcgaTATTTGTACCTTTGAATCTAAATATAAGAGATCTGTGAAAGATCATCAGTTATTGCATAAACACCCTTCTGAAATCGAAATGTTCAAGTGTGATGCTTGTGcttatgaaactaaatataaggGTCACCTGAAAAATCATCAGTTAACGCACAAAGACACTTCTGAAATCCAGATGTACAGATGTGGTACATGTGACTATGAAAGTAAACGTAAATGTGATCTGAAAACTCACGAATTATTACACAAAAATCCTTCTGAAGTCCAAATGTTCAAGTGTGATGTTTGTTCTcatgaaactaaatataaaagacatttgaaAGTTCATCAATTAACTCACAAAGATGCCTCTGAAATTCAAATGTACAGGTGCGATAAATGTGATTACAAAAATAGACGCAAGAGTGAGCTGAAACGTCATcaattaacacacaaagacCCGTCAGAAATTCATATGTTTAAGTGTGATACATGTGGGTATAAAGCTAAACGAAAGAATAATCTTGAGATGCATCAGTTAATCCACAAAGATCCTTCGGAAGTCCAGATGTACACGTGTGACaaCATCAGTGCTACTAAGGATCTTGTTATATGCGACCCGTGTTTTGATTTGCTTCGTACCCATGGTGGTTTTGTAAAGTACTGCCCCGAAATGCAGGAAAACTACAAACATCTCGATAAACAGCCTTATATTAAAACTGAAGAAATTGATATTAAACTGGAAGATTGTCATAATGCGCAGCATACATATAAAAACATTGATACACAGTTCGATATTACTGGAaagattgaaataaaacaggaaGATGATCAGGATGCGCAGAAGGAATATATAAACATTGATGAGCAGATTTATATTAAATCTGATGAGATAGAGATAAAGTCAGAAGTACAAGATCAAGATAGtgATATCCCTTCACACAATTTAAATGAGGAAACAgttaaaaacagaaataagCAAATTTCTGAGCATATAGAAGAAACAAAGTGTGATCGTATAGTCAAATGTGGGACCGAAATTCAAATTACCAAATGCATAACTTTGTTAGATGTATCATCGCATGAGAATAGATATAAAAGAAAGTTTGAAGGTGACTTAAAATCCacaattatttcaaatctgAAGTACAAGTGTAACAAATGTGCTTATGGATGTGAAAGTAACGGTAAGCTGAAACGTCACCAGTTAGCACACAAAGACTCTTCTGAAAtcaaaatgtacaaatgtgatatttGCACTTTCGAATCTAAATATAAGACATCTGTCAAAGCTCATcaattaacacacaaagacccttctgatATCCAAATGTACACTTGCAATACATGTGGATATAAATCTAAACGAAAGAATAATCTTGATGTGCATCAGTTAATCCACAAAGACCCTTTGGAAATCCAGATGTACACGTGTGATGTATGTGGTTATGAAACTAAACGCAAACATGAGTTAAAAAGTCATGGATTATTGCACAAAAACCCTTCTGAAGTCCAAATGTACAAATATGATATTTGTACTTTCGAATCTAAATATAAGACATCTGTCAAAGCTCATCAATTAACACACAAGGACCCTTCTGAAATcgaaatgtacaagtgtgatacttgtacttatgaaactaaatataagaaTGACCTGAAAAATCATCATTTAAGACACAAAGGCACTTCTGAAATCCATAAATTGTTGCACAAGGACCATTCTGAAGTACAAATGTTCAAGTGTGATGTTTGTTCTTATGTAACTAAATATAAGAGGCATTTGAAAACTCATCAGTTAACACACAAAGATCCTTCTGAAGTCGAAATGTACAAGTGCTATAAatgtgtttacaaaaatatacgtAAGAGTGATATGATACGTCATcaattaacacacaaagacccttctgatATTCAAATGTACACATGTAATACATGTGGATACAAAGCTAAACGAAAGAATGATCTTGTGGTGCATCAGTTAATCCACAAAAATCCTTTGGAAATCCAGATGTACACGTGTGATGTATGTGGTTATGAAACTAAACGCAAACATGAGCTAAAAAGTCATGGATTATTGCACAAAAACCattctgaaatccaaatgtacaattGTGAAACTTGTAGTTATAAAACTAAGTATAAGCATCATTTGAGAACTCATCAGTTAAAgcacaaagacccttctgaaaccaaaatgtacaaatgtgatatttGTACTTTTGAATCTAAATATAAGACATCTGTGAAAGCTCATcaattaacacacaaagacccttctgaaatcgaaatgtacaagtgtgatacttgtacttatgaaactaaatataaaactgTACTGAAAACTCATCAGTTAACACACAAAGACTCTTCTGAAATCGAAATCTGCAAGTCTGATACTTGTACTTATGAAACTAAGTATAAGAATCACCTGAAAAATCATGAAGTAAGGGACAAAGGCATTTCTGTCCATAAATTTTTACGCGAAGACCATTCTGAAGAACAAATGTTCAAGTGTGATGTTTGTTCTTATGTAGCTAAATATAAGAGGCATTTGAAAACTCATCAGTTAACACACAAAGATCCTTCTGAAGTCGAAATGTACAAGTGCTATAAATGCGTTTACAAAAATAGACGTAAGAGTGATATGATACGTCATcaattaacacacaaagacccttctgatATCCAAATGTACACTTGTAATACATGTGGATATAAAGCTAAACGAAAGAATAATCTTGTGGTGCATCAGTTAATCCACAAAGACCCTTCGGAAATCCAGATGTACACGTGTGATGTATGTGGTTATGAAACTAAACGTAAACATAAGCTAAAAAGTCATGGATTATtgcacaaagacccttctgaaatccaaatgtacaagtgtgatactTGTAgttatgaaactaaatataacCATCATTTGAAAACTCATCAGTTAAAGCACAAAGATCCTTCTGAAAtcaaaatgtacaaatgtgatatgTGTACTTTCGAATCTAAATATAAGACATCTGTGAAAGGTCATCAATTAACACACaaaagacccttctga
Protein Sequence: MQSEDSNKKTVCRLCLNITSYTNSEVIEEVTREILDVVLPNLKLEEGHKHLMCKTCGSQLLSAFNFKSTCMGTEDIISTYANSNTYSMPLVDLTELYLKMNGNIQLTDIRENQRICRLCLQLVQYEFVSLYGVDNDIIDAYIPLVNVNATKDPVMCDPCFDLLRTNGGFVKYCLEAQENYKCVSKQPYIKTEEIELEDGCNVRHIYKNIDEHITTEKMEIKQEDDKDVQEEYTNIDAPSYIKFEEFQIKLEGSNNVHDECVNIDNHMYIKSDEMEIKSEGEDQDSDFLSQDSDEETIPNKNKQISKHIEETKYDGITKCETEVQINKCKTPLHVLSCENRYKRMFEGDLNLKHKCNKCAYRTKCSSKLKRHQLIHKDPSEVQMYKCDICTFESKYKRSVKDHQLLHKHPSEIEMFKCDACAYETKYKGHLKNHQLTHKDTSEIQMYRCGTCDYESKRKCDLKTHELLHKNPSEVQMFKCDVCSHETKYKRHLKVHQLTHKDASEIQMYRCDKCDYKNRRKSELKRHQLTHKDPSEIHMFKCDTCGYKAKRKNNLEMHQLIHKDPSEVQMYTCDNISATKDLVICDPCFDLLRTHGGFVKYCPEMQENYKHLDKQPYIKTEEIDIKLEDCHNAQHTYKNIDTQFDITGKIEIKQEDDQDAQKEYINIDEQIYIKSDEIEIKSEVQDQDSDIPSHNLNEETVKNRNKQISEHIEETKCDRIVKCGTEIQITKCITLLDVSSHENRYKRKFEGDLKSTIISNLKYKCNKCAYGCESNGKLKRHQLAHKDSSEIKMYKCDICTFESKYKTSVKAHQLTHKDPSDIQMYTCNTCGYKSKRKNNLDVHQLIHKDPLEIQMYTCDVCGYETKRKHELKSHGLLHKNPSEVQMYKYDICTFESKYKTSVKAHQLTHKDPSEIEMYKCDTCTYETKYKNDLKNHHLRHKGTSEIHKLLHKDHSEVQMFKCDVCSYVTKYKRHLKTHQLTHKDPSEVEMYKCYKCVYKNIRKSDMIRHQLTHKDPSDIQMYTCNTCGYKAKRKNDLVVHQLIHKNPLEIQMYTCDVCGYETKRKHELKSHGLLHKNHSEIQMYNCETCSYKTKYKHHLRTHQLKHKDPSETKMYKCDICTFESKYKTSVKAHQLTHKDPSEIEMYKCDTCTYETKYKTVLKTHQLTHKDSSEIEICKSDTCTYETKYKNHLKNHEVRDKGISVHKFLREDHSEEQMFKCDVCSYVAKYKRHLKTHQLTHKDPSEVEMYKCYKCVYKNRRKSDMIRHQLTHKDPSDIQMYTCNTCGYKAKRKNNLVVHQLIHKDPSEIQMYTCDVCGYETKRKHKLKSHGLLHKDPSEIQMYKCDTCSYETKYNHHLKTHQLKHKDPSEIKMYKCDMCTFESKYKTSVKGHQLTHKRPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -