Malt042810.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Monochamus alternatus
Gene Symbol
-
Assembly
GCA_037114965.1
Location
CM073434.1:43527084-43543312[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 41 0.023 1.7 10.8 3.5 1 23 188 210 188 210 0.99
2 41 0.036 2.6 10.1 1.5 1 23 219 241 219 241 0.99
3 41 0.59 43 6.3 4.3 1 23 250 272 250 272 0.97
4 41 0.017 1.2 11.2 3.7 1 23 281 303 281 303 0.98
5 41 2.3 1.7e+02 4.4 9.3 1 23 308 330 308 330 0.98
6 41 0.027 2 10.5 2.8 1 23 339 362 339 362 0.97
7 41 0.013 0.91 11.6 3.3 1 23 371 394 371 394 0.96
8 41 8.5 6.2e+02 2.7 9.4 1 23 403 425 403 425 0.99
9 41 0.0032 0.23 13.4 2.8 1 23 434 456 434 456 0.99
10 41 0.061 4.4 9.4 4.0 1 23 465 488 465 488 0.97
11 41 0.0094 0.68 12.0 2.2 1 23 497 519 497 519 0.99
12 41 0.04 2.9 10.0 4.2 1 23 528 550 528 550 0.99
13 41 0.012 0.9 11.6 2.8 1 23 559 581 559 581 0.99
14 41 0.31 23 7.2 0.8 1 20 590 609 590 611 0.96
15 41 0.012 0.86 11.6 1.1 1 23 689 711 689 711 0.99
16 41 0.23 17 7.6 8.4 1 23 720 742 720 742 0.98
17 41 1 74 5.6 4.2 1 23 747 769 747 769 0.98
18 41 1.1 80 5.4 5.5 1 23 778 800 778 800 0.99
19 41 0.0072 0.52 12.3 2.5 1 23 805 828 805 828 0.97
20 41 0.011 0.8 11.7 2.0 1 23 837 859 837 859 0.99
21 41 0.13 9.1 8.4 1.1 1 23 868 891 868 891 0.97
22 41 0.00069 0.05 15.5 2.9 1 23 900 922 900 922 0.98
23 41 0.00093 0.067 15.1 1.8 1 23 931 954 931 954 0.97
24 41 0.036 2.6 10.1 3.5 1 23 963 985 963 985 0.98
25 41 0.13 9.1 8.4 1.1 1 23 994 1017 994 1017 0.97
26 41 0.022 1.6 10.8 0.4 1 23 1026 1048 1026 1048 0.98
27 41 0.0046 0.33 12.9 2.1 1 23 1057 1080 1057 1080 0.97
28 41 0.0014 0.1 14.6 4.7 1 23 1089 1111 1089 1111 0.99
29 41 0.15 11 8.2 0.8 1 23 1225 1247 1225 1247 0.99
30 41 3 2.2e+02 4.1 7.8 1 23 1256 1278 1256 1278 0.98
31 41 0.049 3.5 9.7 3.3 1 23 1283 1305 1283 1305 0.97
32 41 0.0081 0.59 12.2 5.3 1 23 1314 1336 1314 1336 0.98
33 41 0.77 55 5.9 3.6 1 23 1345 1367 1345 1367 0.98
34 41 0.2 15 7.8 2.3 1 23 1376 1399 1376 1399 0.95
35 41 0.013 0.96 11.5 5.5 1 23 1408 1430 1408 1430 0.98
36 41 0.13 9.3 8.4 0.8 1 23 1439 1462 1439 1462 0.96
37 41 0.0057 0.41 12.7 2.6 1 23 1471 1493 1471 1493 0.99
38 41 0.026 1.9 10.6 4.8 1 23 1502 1525 1502 1525 0.97
39 41 0.0032 0.23 13.4 3.1 1 23 1534 1556 1534 1556 0.98
40 41 0.0034 0.25 13.4 3.9 1 23 1585 1608 1585 1608 0.97
41 41 1.3 94 5.2 7.6 1 23 1617 1639 1617 1639 0.98

Sequence Information

Coding Sequence
ATGGAAGGTCTATCGAATATCAAATGTGAAGATTTGAAAATCAAATCTGGAGAGAATTATAGTGATACCAACTTAGAGAATTTAAAAGATGAACTTATCGACTGCACTCACATAAGTCTATTAGGGAACTGCTTGAGTGCAAAGGAGGAGATTAAAGATATTTGTGACGACAGTATAGAAATTTTATCCAGTATTAAGTGTGAAGATATTGAAATCAAATCGGAAGAGAATTATAGTGATGCCAGCTTACCGAATTTAAAAGATGAACCTGTCGACTGCACCGGCACAAGTTTATTAACGAACTGTTTGAGTACGAAGGAGGAAATTAAAGGTATATGTGAGGACAACGCCATAGAAAGCTTGTCCAGTATTAAATGTGAAGATATTGAAATCAAATCGGAAGAGAATTATAGTGACACTTCCTTACAAAACTCGAAAGATGGGTCTGACGATTGCACGAttgaaaaaaagaataattttactTTGAAGTGCAAAAGGAAGCAATATGATTCAGAAGACAAATACTACGAGTTAAACGACAGAGTCTTTGAAAAGGAGATGTACAAATGTAACGCTTGTGACTATAAAACTAATCAGAAGaggtattttattaaacatcagcTTAGACATGAGGATGTCTCTGAAGAACggatgtataaatgtgatttgtgtgattataaaaccgtTTATGACAACGCTTTTACACGACATCAGCTAAGACACAGAGACATACCCGagaagagaatatttaaatgtaaatccTGTGATTACGAAACATTTTATAAACCTAATTTTAAAAACCATAAGCTGAAACACAAAGACGTGCCTGAGGAGcagatgtttaaatgtgattcgtgcgattataaaaccatttataacAGCTACTTTACAAAACATCAATTAAAACACAACACGCGGATGTATGAATGTGATTCATGTGATTTTAAAAGTATCCATAAGCACAGTTTTAAACATCATCAGCAAAAACACGAGAACATCAGTGAAGATCAAATGTATAAGTGTGAATCGTGcgattataaaaccatttataagaaTTATCTTACACAACATCAGTTAAGACGGCACAAGGACTTTCCTAAAGCGCAGATGTATGAATGCGGtttgtgtgattttaaaacaaaatataagttCAACCTTACAAAACACCAGTACATGAAACATAAAGATATCCCCGAAGAAGatatgtataaatgtgattccTGTGATTTTAAAACTGTCTACAAGTACCGTTTTACGCATCATCACCGAAAACATCAGAACATCAGTGAAGATCAAATGTATAAGTGTGATtcatgtgattataaaaccatttataagaGTTATCTAACACAACATCAATTAAAGCACAAATACATTCCTAAAGCGCAGATGTATCGATGCGATTCGTGTGATTTTAAAGCGAAATACAAGAAAAACCTTAAACAACATCAGTCAAAGAAACATAAAGATATTCCCGAAGAAGatatgtataaatgtgattcgtgtgattttaaaacaatttataaaagcTATCTTATACAACATCAGTTAAAACACAAAGACATTTATAAAACCCAGATGTATCAATGTGATTCGTGTGATTTCAAAACTGTCTACAAATACAGTTTTACACAGCATCAGAAAAAACATGAGAACATCAGTGAAGATCAAATGTATAAGTGTGATtcatgtgattataaaaccatttataagacTTATCTCACACAACATCAGTTAAGACACAAAGACATTCCTAAAGCGCAGATGTAtcaatgtgatttgtgtgaGTTTAGAACGAAATATAAGAGAAACATTAGACAACATCAGGAGGAAGTTGAAGATGTCGATTACGGCCAAGCCACAGAAAGTCCGCCTGATATTAAACATGAAAATGTCGAAATCAAATCTGAAGAGATATATATAAGTGACACCATCTTGAAAGATGAACCCACTGAAGACACACCTGAATATGTACAAACAACGAATAATTTTACGGTCAAGGGCAAAAGGAAGCGACAAGGGTTGAAGGAAGAATACCGTGAGTTAAAATGTAGGAACTATACATATAAATGTGATTTCTGTGAATATGAGAGCGATCAAATCAAAAGTCTGGCACGACATCAGCGGAGACATAAAGAAATATCAGAAAAACAGTGGTATCACTGTCATTTATGCGATTATAAGTCTGATCATAAAGGAAACTTCACACAACACCAGCTTAAACACAAAAAACCAAAGTATAAGTGTGATtcatgtgattataaaaccaatTATAAAAAACGTCTTGCAGAACATCATTTGAGACATACGGGCGTCCCCGAAGATcagatgtataaatgtgattcatgtgattataaaaccatcTATAAGAACTGCTTTATGCAGCATCAGTTGAAACACAAAGAGCAGATGTATGAATGTGATTCGTGtgattttaaaacgaaatataagaCCAACCTTACGCAACATCAGCTCATGAAACACAAAAATATCCCCGAAGAAGatatgtataaatgtgattcgtGTGAGTTTAAAACGATTTATAAGAGCGGTCTTACACGACATCAGTTAAAACACAGAGACGTTCTCAAAGCGCAGATGTATgaatgtgatttgtgtgattttaaaacgaaatataagaACAACCTTGTACCACATCAGTTAACGAAACATAAAAATATCCCCGAAGAAGatatgtataaatgtgatttgtgtgattataaaaccatttataagaGCCATCTTGCACGACATCAGTTAAACCACAAAGACTTTCCCGGAGCGCAGATGTATGAATGCGAtttgtgtgattttaaaacaaaatataaggaCAACCTTACAACACATCAGTTaatgaaacataaaaatatcCCCGAAGAGGATATGCATAAGTGTGATTCCTGTGACTTTAAAAGCATTTATAAGAGCGGTCTTACACGACATCAGTTAAAACACAGAGACGTTCTCAAAGCGCAGATGTATgaatgtgatttgtgtgattttaaaacgaaatataagaACAACCTTGTACCACATCAGTTAACGAAACATAAAAATATCCCGGAAGAAGatatgtataaatgtgattcgtgtgattataaaaccatttataagaTTAGCCTTGCACAACATCAAATAATACACAAAGATATCGCAGAAGTGCAGATGTATGAATGTGACTCGTGTGATTTTAAAACCAAATATAAAGGGAACCTTATGAAACACCAGTCTATGAAACATAAAGATATCCCCGAAGAAGatatgtataaatgtgatttgtgtgattttaaaacCGTTAATAAGAGGCATCTCACACGACATCAGTTAAAACACAAAGCGCAGATAGACGTTCGtttacagaatttaaaaaatgaacccgTTGACTGTATTCACACAAGTCTGTTAACGAACTGCTTAAATGTGAAGGAGGAAAGTGAAGATATTTGTGAGGATAACGCCAGAAAAGATTCGTCCAGTATTAACTTTGAATATGTTGAAATCAAATCGGAAGAGGATCATAGTGGCAACCTCTTGAATGATGAACCGATAAGTGAATGCACATGCAAAGGTGCAAAAACAACAAATGATTCTTTGCTTCAACGCAAAAGGAAGCAGCGTGGGTCAAAGAACAAATACCATGGGTTAAAATACAACTCTTCCCGAGTCCAGAAATATAAATGTGATTTCTGTGCATATGAGAGTGATCAAATCAAAAGTCTTGCACGACATCAACAGAGACACAAAGACATGCCAGAAAAACAGATGTATCACTGTCATTCATGTGATTATAAGTCCGATCAAACAGAAAACTTCATACACCATCAGCTTAAACACAAAAAACAGATGTATAAGTGTGATTTGTGTGACTTTAAAACCTATTATAAAAACTACCTTACACAACATCAGTTACAGCATAAGGACATCCCTGAAGATCAGATGTATAGATGTGATTCATGcgattataaaacttatcgaaAGCAAAATCTTAACCACCATCAGTTAAGACACAAGAACATACCCGAAAAACGGATGTATAAGTGTGATTCATGTAATTacaaaaccatttataagaACTATTTTTCACAACATCAGTTACAACACAAAGACGTTCTCAAAGTGCAGATGTATGAATGTTATTCATGTGActttaaaactatttataagACCAACCTTACACAACATCTGTCAAATAAACATAAAGATATTCCTGAAGAAGATATGCATAAGTGTGATTCATGcgattataaaactatttacaagAGCCATCTTGCGCGACATCAGTTAAAACACAAAGACGTTCCCAAAGCGCAGATGTATGAATGCAATTTGTGCGATTTTAAAACGAAGTATAAGGCCAGCCTTACACCACATCAGTtagtaaaacataaaattatccCCAAAGAGGATCTGTATAAATGTGATTCATGTGATTTTACAACCATGTATAAGAGCTATCTTATACGACATCAGTTAAAACACGAAGACGATCTCAAAGCTCAGATGTATAGCTGCGATTTGTGTcattttaaaacgaaatataagaGCAACCTCATACAACACCGGTCTATGAAACATAAAAATGCCCCCGAAGAAGATCTGTATAAATGTGCttcgtgtgattataaaaccagttaTAAGAGCTATCTATCGCGACATCAGTTAAAACACAAAGACGTAATTCGTAAAACGAAACATAAGACCAATCTTATATCCCAGCCAACGAAACATAAAGATATCCTCAAAGAAGATATGTATAAATGCAAtttgtgtgattttaaaacgaaatataagaACAACCTTACACAACACCAGTCCATGAAACACAAAAATATCCCCGAAGAAGATACGCATAAGTGTGATTCATGTGATTTTAAAACCGTTTATAAGAGGTGTCTTACAAGACATCAGTTAAAACACAAAAACATTCTCGAAGTGcagaataaaacaaaataccAATCGTGCGCAACACCAATCCTTGAAACGTAA
Protein Sequence
MEGLSNIKCEDLKIKSGENYSDTNLENLKDELIDCTHISLLGNCLSAKEEIKDICDDSIEILSSIKCEDIEIKSEENYSDASLPNLKDEPVDCTGTSLLTNCLSTKEEIKGICEDNAIESLSSIKCEDIEIKSEENYSDTSLQNSKDGSDDCTIEKKNNFTLKCKRKQYDSEDKYYELNDRVFEKEMYKCNACDYKTNQKRYFIKHQLRHEDVSEERMYKCDLCDYKTVYDNAFTRHQLRHRDIPEKRIFKCKSCDYETFYKPNFKNHKLKHKDVPEEQMFKCDSCDYKTIYNSYFTKHQLKHNTRMYECDSCDFKSIHKHSFKHHQQKHENISEDQMYKCESCDYKTIYKNYLTQHQLRRHKDFPKAQMYECGLCDFKTKYKFNLTKHQYMKHKDIPEEDMYKCDSCDFKTVYKYRFTHHHRKHQNISEDQMYKCDSCDYKTIYKSYLTQHQLKHKYIPKAQMYRCDSCDFKAKYKKNLKQHQSKKHKDIPEEDMYKCDSCDFKTIYKSYLIQHQLKHKDIYKTQMYQCDSCDFKTVYKYSFTQHQKKHENISEDQMYKCDSCDYKTIYKTYLTQHQLRHKDIPKAQMYQCDLCEFRTKYKRNIRQHQEEVEDVDYGQATESPPDIKHENVEIKSEEIYISDTILKDEPTEDTPEYVQTTNNFTVKGKRKRQGLKEEYRELKCRNYTYKCDFCEYESDQIKSLARHQRRHKEISEKQWYHCHLCDYKSDHKGNFTQHQLKHKKPKYKCDSCDYKTNYKKRLAEHHLRHTGVPEDQMYKCDSCDYKTIYKNCFMQHQLKHKEQMYECDSCDFKTKYKTNLTQHQLMKHKNIPEEDMYKCDSCEFKTIYKSGLTRHQLKHRDVLKAQMYECDLCDFKTKYKNNLVPHQLTKHKNIPEEDMYKCDLCDYKTIYKSHLARHQLNHKDFPGAQMYECDLCDFKTKYKDNLTTHQLMKHKNIPEEDMHKCDSCDFKSIYKSGLTRHQLKHRDVLKAQMYECDLCDFKTKYKNNLVPHQLTKHKNIPEEDMYKCDSCDYKTIYKISLAQHQIIHKDIAEVQMYECDSCDFKTKYKGNLMKHQSMKHKDIPEEDMYKCDLCDFKTVNKRHLTRHQLKHKAQIDVRLQNLKNEPVDCIHTSLLTNCLNVKEESEDICEDNARKDSSSINFEYVEIKSEEDHSGNLLNDEPISECTCKGAKTTNDSLLQRKRKQRGSKNKYHGLKYNSSRVQKYKCDFCAYESDQIKSLARHQQRHKDMPEKQMYHCHSCDYKSDQTENFIHHQLKHKKQMYKCDLCDFKTYYKNYLTQHQLQHKDIPEDQMYRCDSCDYKTYRKQNLNHHQLRHKNIPEKRMYKCDSCNYKTIYKNYFSQHQLQHKDVLKVQMYECYSCDFKTIYKTNLTQHLSNKHKDIPEEDMHKCDSCDYKTIYKSHLARHQLKHKDVPKAQMYECNLCDFKTKYKASLTPHQLVKHKIIPKEDLYKCDSCDFTTMYKSYLIRHQLKHEDDLKAQMYSCDLCHFKTKYKSNLIQHRSMKHKNAPEEDLYKCASCDYKTSYKSYLSRHQLKHKDVIRKTKHKTNLISQPTKHKDILKEDMYKCNLCDFKTKYKNNLTQHQSMKHKNIPEEDTHKCDSCDFKTVYKRCLTRHQLKHKNILEVQNKTKYQSCATPILET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-